RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 NISCHQ9Y2I1 1504 aa23.07■■□□□ 1.28
SNX21-205ENST00000372547 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
SNX21-205ENST00000372547 SUPT5HO00267 1087 aaKnown RBP20.42■□□□□ 0.86
SNX21-205ENST00000372547 HRCP23327 699 aa20.09■□□□□ 0.81
SNX21-205ENST00000372547 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
SNX21-205ENST00000372547 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
SNX21-205ENST00000372547 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
SNX21-205ENST00000372547 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
SNX21-205ENST00000372547 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
SNX21-205ENST00000372547 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
SNX21-205ENST00000372547 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
SNX21-205ENST00000372547 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
SNX21-205ENST00000372547 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
SNX21-205ENST00000372547 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
SNX21-205ENST00000372547 EHMT2Q96KQ7 1210 aa19.01■□□□□ 0.63
SNX21-205ENST00000372547 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
SNX21-205ENST00000372547 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
SNX21-205ENST00000372547 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
SNX21-205ENST00000372547 ZEB1P37275 1124 aaPredicted RBP18.93■□□□□ 0.62
SNX21-205ENST00000372547 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
SNX21-205ENST00000372547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
SNX21-205ENST00000372547 ABCC9O60706 1549 aa18.59■□□□□ 0.57
SNX21-205ENST00000372547 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
SNX21-205ENST00000372547 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
SNX21-205ENST00000372547 CCER1Q8TC90 406 aaPredicted RBP18.54■□□□□ 0.56
SNX21-205ENST00000372547 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.56
SNX21-205ENST00000372547 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
SNX21-205ENST00000372547 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
SNX21-205ENST00000372547 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
SNX21-205ENST00000372547 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
SNX21-205ENST00000372547 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
SNX21-205ENST00000372547 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
SNX21-205ENST00000372547 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
SNX21-205ENST00000372547 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
SNX21-205ENST00000372547 NACADO15069 1562 aa18.13■□□□□ 0.49
SNX21-205ENST00000372547 MYT1Q01538 1121 aa18.09■□□□□ 0.49
SNX21-205ENST00000372547 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
SNX21-205ENST00000372547 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
SNX21-205ENST00000372547 WIZO95785 1651 aa17.96■□□□□ 0.46
SNX21-205ENST00000372547 MIER1Q8N108 512 aa17.95■□□□□ 0.46
SNX21-205ENST00000372547 UBTFP17480 764 aaKnown RBP17.94■□□□□ 0.46
SNX21-205ENST00000372547 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
SNX21-205ENST00000372547 CEP162Q5TB80 1403 aa17.9■□□□□ 0.46
SNX21-205ENST00000372547 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNX21-205ENST00000372547 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
SNX21-205ENST00000372547 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.45
SNX21-205ENST00000372547 SOGA1O94964 1423 aa17.8■□□□□ 0.44
SNX21-205ENST00000372547 WRNQ14191 1432 aaPredicted RBP eCLIP17.8■□□□□ 0.44
SNX21-205ENST00000372547 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
SNX21-205ENST00000372547 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
SNX21-205ENST00000372547 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
SNX21-205ENST00000372547 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
SNX21-205ENST00000372547 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
SNX21-205ENST00000372547 EIF4G1Q04637 1599 aaKnown RBP17.67■□□□□ 0.42
SNX21-205ENST00000372547 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
SNX21-205ENST00000372547 APLP2Q06481 763 aa17.61■□□□□ 0.41
SNX21-205ENST00000372547 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
SNX21-205ENST00000372547 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
SNX21-205ENST00000372547 GOLGA3Q08378 1498 aa17.55■□□□□ 0.4
SNX21-205ENST00000372547 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
SNX21-205ENST00000372547 EEA1Q15075 1411 aa17.49■□□□□ 0.39
SNX21-205ENST00000372547 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
SNX21-205ENST00000372547 BICRAQ9NZM4 1560 aa17.48■□□□□ 0.39
SNX21-205ENST00000372547 CLIP1P30622 1438 aa17.47■□□□□ 0.39
SNX21-205ENST00000372547 BCANQ96GW7 911 aa17.41■□□□□ 0.38
SNX21-205ENST00000372547 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
SNX21-205ENST00000372547 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
SNX21-205ENST00000372547 VPS8Q8N3P4 1428 aa17.36■□□□□ 0.37
SNX21-205ENST00000372547 ITGAEP38570 1179 aa17.34■□□□□ 0.37
SNX21-205ENST00000372547 KCNH8Q96L42 1107 aa17.34■□□□□ 0.37
SNX21-205ENST00000372547 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
SNX21-205ENST00000372547 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
SNX21-205ENST00000372547 ANP32EQ9BTT0 268 aa17.31■□□□□ 0.36
SNX21-205ENST00000372547 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
SNX21-205ENST00000372547 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
SNX21-205ENST00000372547 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
SNX21-205ENST00000372547 FKBP8Q14318 412 aa17.23■□□□□ 0.35
SNX21-205ENST00000372547 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
SNX21-205ENST00000372547 KIF21BO75037 1637 aa17.22■□□□□ 0.35
SNX21-205ENST00000372547 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
SNX21-205ENST00000372547 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
SNX21-205ENST00000372547 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
SNX21-205ENST00000372547 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
SNX21-205ENST00000372547 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
SNX21-205ENST00000372547 NEFLP07196 543 aa17.09■□□□□ 0.33
SNX21-205ENST00000372547 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
SNX21-205ENST00000372547 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
SNX21-205ENST00000372547 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
SNX21-205ENST00000372547 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
SNX21-205ENST00000372547 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.31
SNX21-205ENST00000372547 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
SNX21-205ENST00000372547 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
SNX21-205ENST00000372547 FAM50AQ14320 339 aaKnown RBP16.96■□□□□ 0.31
SNX21-205ENST00000372547 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
SNX21-205ENST00000372547 ANP32CO43423 234 aa16.91■□□□□ 0.3
SNX21-205ENST00000372547 IRX6P78412 446 aaPredicted RBP16.91■□□□□ 0.3
SNX21-205ENST00000372547 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
SNX21-205ENST00000372547 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
SNX21-205ENST00000372547 MAPKBP1O60336 1514 aa16.88■□□□□ 0.29
SNX21-205ENST00000372547 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms