RNA–Protein interactions for RNA: ENST00000368891.9

C10orf88-201, Transcript of chromosome 10 open reading frame 88, humanhuman

TSL 2

Gene C10orf88, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C10orf88-201ENST00000368891 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
C10orf88-201ENST00000368891 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
C10orf88-201ENST00000368891 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
C10orf88-201ENST00000368891 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.56
C10orf88-201ENST00000368891 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
C10orf88-201ENST00000368891 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
C10orf88-201ENST00000368891 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
C10orf88-201ENST00000368891 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
C10orf88-201ENST00000368891 PCGF6Q9BYE7 350 aa23.67■■□□□ 1.38
C10orf88-201ENST00000368891 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
C10orf88-201ENST00000368891 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
C10orf88-201ENST00000368891 HRCP23327 699 aa23.39■■□□□ 1.34
C10orf88-201ENST00000368891 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.34
C10orf88-201ENST00000368891 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
C10orf88-201ENST00000368891 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
C10orf88-201ENST00000368891 SCRIBQ14160 1630 aa23.16■■□□□ 1.3
C10orf88-201ENST00000368891 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
C10orf88-201ENST00000368891 ABCC9O60706 1549 aa22.99■■□□□ 1.27
C10orf88-201ENST00000368891 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
C10orf88-201ENST00000368891 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
C10orf88-201ENST00000368891 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
C10orf88-201ENST00000368891 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
C10orf88-201ENST00000368891 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
C10orf88-201ENST00000368891 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
C10orf88-201ENST00000368891 WIZO95785 1651 aa22.43■■□□□ 1.18
C10orf88-201ENST00000368891 NACADO15069 1562 aa22.32■■□□□ 1.16
C10orf88-201ENST00000368891 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
C10orf88-201ENST00000368891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
C10orf88-201ENST00000368891 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
C10orf88-201ENST00000368891 ZEB1P37275 1124 aaPredicted RBP22.11■■□□□ 1.13
C10orf88-201ENST00000368891 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
C10orf88-201ENST00000368891 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
C10orf88-201ENST00000368891 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
C10orf88-201ENST00000368891 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.11
C10orf88-201ENST00000368891 SOGA1O94964 1423 aa22.01■■□□□ 1.11
C10orf88-201ENST00000368891 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
C10orf88-201ENST00000368891 RUSC2Q8N2Y8 1516 aa21.94■■□□□ 1.1
C10orf88-201ENST00000368891 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
C10orf88-201ENST00000368891 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
C10orf88-201ENST00000368891 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.08
C10orf88-201ENST00000368891 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.08
C10orf88-201ENST00000368891 CEP162Q5TB80 1403 aa21.82■■□□□ 1.08
C10orf88-201ENST00000368891 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
C10orf88-201ENST00000368891 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
C10orf88-201ENST00000368891 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
C10orf88-201ENST00000368891 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
C10orf88-201ENST00000368891 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
C10orf88-201ENST00000368891 TNIKQ9UKE5 1360 aa21.61■■□□□ 1.05
C10orf88-201ENST00000368891 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
C10orf88-201ENST00000368891 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
C10orf88-201ENST00000368891 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
C10orf88-201ENST00000368891 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
C10orf88-201ENST00000368891 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
C10orf88-201ENST00000368891 SYNJ1O43426 1573 aa21.45■■□□□ 1.02
C10orf88-201ENST00000368891 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
C10orf88-201ENST00000368891 APLP2Q06481 763 aa21.4■■□□□ 1.02
C10orf88-201ENST00000368891 CLIP1P30622 1438 aa21.39■■□□□ 1.02
C10orf88-201ENST00000368891 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
C10orf88-201ENST00000368891 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
C10orf88-201ENST00000368891 RAPGEF2Q9Y4G8 1499 aa21.37■■□□□ 1.01
C10orf88-201ENST00000368891 EEA1Q15075 1411 aa21.37■■□□□ 1.01
C10orf88-201ENST00000368891 GTF3C3Q9Y5Q9 886 aa21.36■■□□□ 1.01
C10orf88-201ENST00000368891 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
C10orf88-201ENST00000368891 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
C10orf88-201ENST00000368891 ITGAEP38570 1179 aa21.25■□□□□ 0.99
C10orf88-201ENST00000368891 MIER1Q8N108 512 aa21.23■□□□□ 0.99
C10orf88-201ENST00000368891 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
C10orf88-201ENST00000368891 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
C10orf88-201ENST00000368891 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
C10orf88-201ENST00000368891 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
C10orf88-201ENST00000368891 KIF21BO75037 1637 aa21.1■□□□□ 0.97
C10orf88-201ENST00000368891 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.96
C10orf88-201ENST00000368891 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
C10orf88-201ENST00000368891 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
C10orf88-201ENST00000368891 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
C10orf88-201ENST00000368891 CUX1P39880 1505 aa20.94■□□□□ 0.94
C10orf88-201ENST00000368891 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
C10orf88-201ENST00000368891 PELP1Q8IZL8 1130 aaKnown RBP20.88■□□□□ 0.93
C10orf88-201ENST00000368891 DHX57Q6P158 1386 aaKnown RBP20.88■□□□□ 0.93
C10orf88-201ENST00000368891 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
C10orf88-201ENST00000368891 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
C10orf88-201ENST00000368891 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
C10orf88-201ENST00000368891 CUX2O14529 1486 aa20.79■□□□□ 0.92
C10orf88-201ENST00000368891 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
C10orf88-201ENST00000368891 BIVM-ERCC5R4GMW8 1640 aa20.76■□□□□ 0.91
C10orf88-201ENST00000368891 HIRIP3Q9BW71 556 aaPredicted RBP20.75■□□□□ 0.91
C10orf88-201ENST00000368891 KCNH8Q96L42 1107 aa20.74■□□□□ 0.91
C10orf88-201ENST00000368891 CFTRP13569 1480 aa20.73■□□□□ 0.91
C10orf88-201ENST00000368891 IGF1RP08069 1367 aa20.73■□□□□ 0.91
C10orf88-201ENST00000368891 CCNB3Q8WWL7 1395 aa20.73■□□□□ 0.91
C10orf88-201ENST00000368891 SIN3AQ96ST3 1273 aa20.72■□□□□ 0.91
C10orf88-201ENST00000368891 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
C10orf88-201ENST00000368891 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
C10orf88-201ENST00000368891 HMGXB3Q12766 1538 aa20.65■□□□□ 0.9
C10orf88-201ENST00000368891 RAB3GAP2Q9H2M9 1393 aa20.65■□□□□ 0.9
C10orf88-201ENST00000368891 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
C10orf88-201ENST00000368891 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
C10orf88-201ENST00000368891 CADPSQ9ULU8 1353 aa20.6■□□□□ 0.89
C10orf88-201ENST00000368891 PHLDB1Q86UU1 1377 aa20.59■□□□□ 0.89
C10orf88-201ENST00000368891 RAD54L2Q9Y4B4 1467 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms