RNA–Protein interactions for RNA: ENST00000366706.6

OBSCN-203, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 5

Gene OBSCN, Length 2,983 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-203ENST00000366706 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
OBSCN-203ENST00000366706 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
OBSCN-203ENST00000366706 HRCP23327 699 aa25.53■■□□□ 1.68
OBSCN-203ENST00000366706 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
OBSCN-203ENST00000366706 PCGF6Q9BYE7 350 aa25.2■■□□□ 1.63
OBSCN-203ENST00000366706 PPARGC1BQ86YN6 1023 aaKnown RBP25.18■■□□□ 1.62
OBSCN-203ENST00000366706 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
OBSCN-203ENST00000366706 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
OBSCN-203ENST00000366706 PELP1Q8IZL8 1130 aaKnown RBP24.83■■□□□ 1.56
OBSCN-203ENST00000366706 DCAF8L2P0C7V8 631 aa24.48■■□□□ 1.51
OBSCN-203ENST00000366706 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.51
OBSCN-203ENST00000366706 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.48
OBSCN-203ENST00000366706 CCDC180Q9P1Z9 1646 aa24.31■■□□□ 1.48
OBSCN-203ENST00000366706 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
OBSCN-203ENST00000366706 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
OBSCN-203ENST00000366706 SCAF1Q9H7N4 1312 aaKnown RBP24.2■■□□□ 1.47
OBSCN-203ENST00000366706 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
OBSCN-203ENST00000366706 MYT1Q01538 1121 aa23.92■■□□□ 1.42
OBSCN-203ENST00000366706 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
OBSCN-203ENST00000366706 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
OBSCN-203ENST00000366706 ABCC9O60706 1549 aa23.63■■□□□ 1.37
OBSCN-203ENST00000366706 NEUROD1Q13562 356 aa23.57■■□□□ 1.36
OBSCN-203ENST00000366706 ACIN1Q9UKV3 1341 aaKnown RBP23.56■■□□□ 1.36
OBSCN-203ENST00000366706 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
OBSCN-203ENST00000366706 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.34
OBSCN-203ENST00000366706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.34
OBSCN-203ENST00000366706 CCER1Q8TC90 406 aaPredicted RBP23.32■■□□□ 1.32
OBSCN-203ENST00000366706 CENPBP07199 599 aaPredicted RBP23.29■■□□□ 1.32
OBSCN-203ENST00000366706 DIEXFQ68CQ4 756 aaKnown RBP23.26■■□□□ 1.31
OBSCN-203ENST00000366706 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
OBSCN-203ENST00000366706 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
OBSCN-203ENST00000366706 YTHDC1Q96MU7 727 aaKnown RBP23.03■■□□□ 1.28
OBSCN-203ENST00000366706 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
OBSCN-203ENST00000366706 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
OBSCN-203ENST00000366706 BCL11AQ9H165 835 aa22.8■■□□□ 1.24
OBSCN-203ENST00000366706 ZNF316A6NFI3 1004 aaPredicted RBP22.78■■□□□ 1.24
OBSCN-203ENST00000366706 NACADO15069 1562 aa22.76■■□□□ 1.23
OBSCN-203ENST00000366706 MIER1Q8N108 512 aa22.69■■□□□ 1.22
OBSCN-203ENST00000366706 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
OBSCN-203ENST00000366706 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
OBSCN-203ENST00000366706 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
OBSCN-203ENST00000366706 CEP162Q5TB80 1403 aa22.42■■□□□ 1.18
OBSCN-203ENST00000366706 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
OBSCN-203ENST00000366706 PRKCSHP14314 528 aaPredicted RBP22.39■■□□□ 1.17
OBSCN-203ENST00000366706 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
OBSCN-203ENST00000366706 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
OBSCN-203ENST00000366706 WIZO95785 1651 aa22.31■■□□□ 1.16
OBSCN-203ENST00000366706 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
OBSCN-203ENST00000366706 ANP32EQ9BTT0 268 aa22.27■■□□□ 1.16
OBSCN-203ENST00000366706 CCDC88BA6NC98 1476 aa22.26■■□□□ 1.15
OBSCN-203ENST00000366706 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
OBSCN-203ENST00000366706 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
OBSCN-203ENST00000366706 SOGA1O94964 1423 aa22.22■■□□□ 1.15
OBSCN-203ENST00000366706 TNIKQ9UKE5 1360 aa22.21■■□□□ 1.15
OBSCN-203ENST00000366706 TSHZ2Q9NRE2 1034 aa22.17■■□□□ 1.14
OBSCN-203ENST00000366706 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
OBSCN-203ENST00000366706 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
OBSCN-203ENST00000366706 RUSC2Q8N2Y8 1516 aa22.09■■□□□ 1.13
OBSCN-203ENST00000366706 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
OBSCN-203ENST00000366706 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
OBSCN-203ENST00000366706 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
OBSCN-203ENST00000366706 BCANQ96GW7 911 aa21.99■■□□□ 1.11
OBSCN-203ENST00000366706 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
OBSCN-203ENST00000366706 APLP2Q06481 763 aa21.97■■□□□ 1.11
OBSCN-203ENST00000366706 GOLGA3Q08378 1498 aa21.94■■□□□ 1.1
OBSCN-203ENST00000366706 EEA1Q15075 1411 aa21.89■■□□□ 1.09
OBSCN-203ENST00000366706 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
OBSCN-203ENST00000366706 CLIP1P30622 1438 aa21.84■■□□□ 1.09
OBSCN-203ENST00000366706 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
OBSCN-203ENST00000366706 FKBP8Q14318 412 aa21.79■■□□□ 1.08
OBSCN-203ENST00000366706 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
OBSCN-203ENST00000366706 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
OBSCN-203ENST00000366706 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
OBSCN-203ENST00000366706 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
OBSCN-203ENST00000366706 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
OBSCN-203ENST00000366706 RBM19Q9Y4C8 960 aaKnown RBP21.67■■□□□ 1.06
OBSCN-203ENST00000366706 ITGAEP38570 1179 aa21.64■■□□□ 1.06
OBSCN-203ENST00000366706 NEFLP07196 543 aa21.59■■□□□ 1.05
OBSCN-203ENST00000366706 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
OBSCN-203ENST00000366706 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
OBSCN-203ENST00000366706 KANK4Q5T7N3 995 aaPredicted RBP21.57■■□□□ 1.04
OBSCN-203ENST00000366706 KIF21BO75037 1637 aa21.54■■□□□ 1.04
OBSCN-203ENST00000366706 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
OBSCN-203ENST00000366706 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
OBSCN-203ENST00000366706 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
OBSCN-203ENST00000366706 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
OBSCN-203ENST00000366706 MSH5O43196 834 aa21.46■■□□□ 1.03
OBSCN-203ENST00000366706 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
OBSCN-203ENST00000366706 ANO8Q9HCE9 1232 aaPredicted RBP21.45■■□□□ 1.03
OBSCN-203ENST00000366706 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
OBSCN-203ENST00000366706 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
OBSCN-203ENST00000366706 CCNB3Q8WWL7 1395 aa21.32■■□□□ 1
OBSCN-203ENST00000366706 IRX6P78412 446 aaPredicted RBP21.31■■□□□ 1
OBSCN-203ENST00000366706 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
OBSCN-203ENST00000366706 RAB3GAP2Q9H2M9 1393 aa21.3■■□□□ 1
OBSCN-203ENST00000366706 ARAP1Q96P48 1450 aa21.29■■□□□ 1
OBSCN-203ENST00000366706 ANP32CO43423 234 aa21.28■■□□□ 1
OBSCN-203ENST00000366706 PPP1R15AO75807 674 aaPredicted RBP21.27■■□□□ 1
OBSCN-203ENST00000366706 PEG3Q9GZU2 1588 aa21.25■□□□□ 0.99
OBSCN-203ENST00000366706 WDR97A6NE52 1622 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms