RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
LDLRAD4-202ENST00000361303 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
LDLRAD4-202ENST00000361303 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.38
LDLRAD4-202ENST00000361303 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
LDLRAD4-202ENST00000361303 APLP2Q06481 763 aa17.08■□□□□ 0.32
LDLRAD4-202ENST00000361303 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
LDLRAD4-202ENST00000361303 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
LDLRAD4-202ENST00000361303 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
LDLRAD4-202ENST00000361303 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
LDLRAD4-202ENST00000361303 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD4-202ENST00000361303 TTBK1Q5TCY1 1321 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD4-202ENST00000361303 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
LDLRAD4-202ENST00000361303 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
LDLRAD4-202ENST00000361303 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
LDLRAD4-202ENST00000361303 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
LDLRAD4-202ENST00000361303 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
LDLRAD4-202ENST00000361303 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
LDLRAD4-202ENST00000361303 CENPBP07199 599 aaPredicted RBP16.1■□□□□ 0.17
LDLRAD4-202ENST00000361303 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
LDLRAD4-202ENST00000361303 NEFLP07196 543 aa15.97■□□□□ 0.15
LDLRAD4-202ENST00000361303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
LDLRAD4-202ENST00000361303 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
LDLRAD4-202ENST00000361303 DAXXQ9UER7 740 aaPredicted RBP15.65■□□□□ 0.1
LDLRAD4-202ENST00000361303 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
LDLRAD4-202ENST00000361303 ITGAEP38570 1179 aa15.59■□□□□ 0.09
LDLRAD4-202ENST00000361303 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
LDLRAD4-202ENST00000361303 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
LDLRAD4-202ENST00000361303 YTHDC1Q96MU7 727 aaKnown RBP15.55■□□□□ 0.08
LDLRAD4-202ENST00000361303 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
LDLRAD4-202ENST00000361303 PPARGC1BQ86YN6 1023 aaKnown RBP15.48■□□□□ 0.07
LDLRAD4-202ENST00000361303 ABCC9O60706 1549 aa15.36■□□□□ 0.05
LDLRAD4-202ENST00000361303 MYT1Q01538 1121 aa15.33■□□□□ 0.04
LDLRAD4-202ENST00000361303 FAM50AQ14320 339 aaKnown RBP15.29■□□□□ 0.04
LDLRAD4-202ENST00000361303 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
LDLRAD4-202ENST00000361303 TRIM52Q96A61 297 aa15.27■□□□□ 0.04
LDLRAD4-202ENST00000361303 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.03
LDLRAD4-202ENST00000361303 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
LDLRAD4-202ENST00000361303 FBLN2P98095 1184 aa15.24■□□□□ 0.03
LDLRAD4-202ENST00000361303 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
LDLRAD4-202ENST00000361303 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
LDLRAD4-202ENST00000361303 BCANQ96GW7 911 aa15.17■□□□□ 0.02
LDLRAD4-202ENST00000361303 NEFMP07197 916 aa15.14■□□□□ 0.01
LDLRAD4-202ENST00000361303 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
LDLRAD4-202ENST00000361303 HRCP23327 699 aa15.1■□□□□ 0.01
LDLRAD4-202ENST00000361303 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
LDLRAD4-202ENST00000361303 SLC24A1O60721 1099 aa15.08■□□□□ 0
LDLRAD4-202ENST00000361303 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ 0
LDLRAD4-202ENST00000361303 ZNF326Q5BKZ1 582 aaKnown RBP15.03■□□□□ -0
LDLRAD4-202ENST00000361303 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
LDLRAD4-202ENST00000361303 NEUROD1Q13562 356 aa15.02■□□□□ -0
LDLRAD4-202ENST00000361303 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
LDLRAD4-202ENST00000361303 CANXP27824 592 aaKnown RBP14.97□□□□□ -0.01
LDLRAD4-202ENST00000361303 ANP32CO43423 234 aa14.96□□□□□ -0.01
LDLRAD4-202ENST00000361303 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
LDLRAD4-202ENST00000361303 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
LDLRAD4-202ENST00000361303 ZNF777Q9ULD5 760 aaPredicted RBP14.87□□□□□ -0.03
LDLRAD4-202ENST00000361303 ARID3CA6NKF2 412 aa14.8□□□□□ -0.04
LDLRAD4-202ENST00000361303 P3H3Q8IVL6 736 aa14.8□□□□□ -0.04
LDLRAD4-202ENST00000361303 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
LDLRAD4-202ENST00000361303 CHGAP10645 457 aaKnown RBP14.75□□□□□ -0.05
LDLRAD4-202ENST00000361303 BCL11AQ9H165 835 aa14.74□□□□□ -0.05
LDLRAD4-202ENST00000361303 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
LDLRAD4-202ENST00000361303 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
LDLRAD4-202ENST00000361303 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
LDLRAD4-202ENST00000361303 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
LDLRAD4-202ENST00000361303 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
LDLRAD4-202ENST00000361303 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
LDLRAD4-202ENST00000361303 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
LDLRAD4-202ENST00000361303 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
LDLRAD4-202ENST00000361303 ANP32AP39687 249 aaKnown RBP14.57□□□□□ -0.08
LDLRAD4-202ENST00000361303 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
LDLRAD4-202ENST00000361303 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
LDLRAD4-202ENST00000361303 ANP32BQ92688 251 aaKnown RBP14.56□□□□□ -0.08
LDLRAD4-202ENST00000361303 HSP90AA1P07900 732 aaKnown RBP14.56□□□□□ -0.08
LDLRAD4-202ENST00000361303 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
LDLRAD4-202ENST00000361303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
LDLRAD4-202ENST00000361303 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.49□□□□□ -0.09
LDLRAD4-202ENST00000361303 ACIN1Q9UKV3 1341 aaKnown RBP14.48□□□□□ -0.09
LDLRAD4-202ENST00000361303 PPP1R15AO75807 674 aaPredicted RBP14.48□□□□□ -0.09
LDLRAD4-202ENST00000361303 A0A0G2JS52 829 aa14.47□□□□□ -0.09
LDLRAD4-202ENST00000361303 MTUS2Q5JR59 1369 aa14.47□□□□□ -0.09
LDLRAD4-202ENST00000361303 WDR43Q15061 677 aaKnown RBP eCLIP14.46□□□□□ -0.09
LDLRAD4-202ENST00000361303 C14orf37Q86TY3 774 aa14.46□□□□□ -0.09
LDLRAD4-202ENST00000361303 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
LDLRAD4-202ENST00000361303 HAP1P54257 671 aaPredicted RBP14.41□□□□□ -0.1
LDLRAD4-202ENST00000361303 TMC1Q8TDI8 760 aa14.41□□□□□ -0.1
LDLRAD4-202ENST00000361303 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
LDLRAD4-202ENST00000361303 CDK11BP21127 795 aaKnown RBP14.39□□□□□ -0.11
LDLRAD4-202ENST00000361303 CHIC2Q9UKJ5 165 aa14.39□□□□□ -0.11
LDLRAD4-202ENST00000361303 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
LDLRAD4-202ENST00000361303 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
LDLRAD4-202ENST00000361303 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
LDLRAD4-202ENST00000361303 PLEKHD1A6NEE1 506 aa14.36□□□□□ -0.11
LDLRAD4-202ENST00000361303 ERCC6Q03468 1493 aa14.36□□□□□ -0.11
LDLRAD4-202ENST00000361303 ZBTB7CA1YPR0 619 aa14.36□□□□□ -0.11
LDLRAD4-202ENST00000361303 KDM2AQ9Y2K7 1162 aa14.34□□□□□ -0.11
LDLRAD4-202ENST00000361303 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
LDLRAD4-202ENST00000361303 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
LDLRAD4-202ENST00000361303 FAM9BQ8IZU0 186 aa14.32□□□□□ -0.12
LDLRAD4-202ENST00000361303 CDCA8Q53HL2 280 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms