RNA–Protein interactions for RNA: ENST00000360547.9

IL16-202, Transcript of interleukin 16, humanhuman

TSL 2

Gene IL16, Length 5,120 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IL16-202ENST00000360547 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
IL16-202ENST00000360547 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
IL16-202ENST00000360547 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
IL16-202ENST00000360547 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
IL16-202ENST00000360547 ABCC9O60706 1549 aa18.42■□□□□ 0.54
IL16-202ENST00000360547 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.54
IL16-202ENST00000360547 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
IL16-202ENST00000360547 ZCCHC6Q5VYS8 1495 aaKnown RBP18.06■□□□□ 0.48
IL16-202ENST00000360547 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
IL16-202ENST00000360547 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
IL16-202ENST00000360547 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
IL16-202ENST00000360547 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
IL16-202ENST00000360547 SCRIBQ14160 1630 aa17.7■□□□□ 0.42
IL16-202ENST00000360547 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
IL16-202ENST00000360547 APLP2Q06481 763 aa17.6■□□□□ 0.41
IL16-202ENST00000360547 NACADO15069 1562 aa17.59■□□□□ 0.41
IL16-202ENST00000360547 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.39
IL16-202ENST00000360547 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
IL16-202ENST00000360547 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
IL16-202ENST00000360547 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
IL16-202ENST00000360547 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
IL16-202ENST00000360547 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
IL16-202ENST00000360547 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
IL16-202ENST00000360547 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
IL16-202ENST00000360547 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
IL16-202ENST00000360547 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
IL16-202ENST00000360547 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
IL16-202ENST00000360547 MYT1Q01538 1121 aa17.13■□□□□ 0.33
IL16-202ENST00000360547 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
IL16-202ENST00000360547 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
IL16-202ENST00000360547 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
IL16-202ENST00000360547 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
IL16-202ENST00000360547 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
IL16-202ENST00000360547 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
IL16-202ENST00000360547 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
IL16-202ENST00000360547 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
IL16-202ENST00000360547 NEFLP07196 543 aa16.79■□□□□ 0.28
IL16-202ENST00000360547 HRCP23327 699 aa16.79■□□□□ 0.28
IL16-202ENST00000360547 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
IL16-202ENST00000360547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.27
IL16-202ENST00000360547 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.27
IL16-202ENST00000360547 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
IL16-202ENST00000360547 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
IL16-202ENST00000360547 FBLN2P98095 1184 aa16.64■□□□□ 0.25
IL16-202ENST00000360547 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
IL16-202ENST00000360547 ITGAEP38570 1179 aa16.57■□□□□ 0.24
IL16-202ENST00000360547 YTHDC1Q96MU7 727 aaKnown RBP16.54■□□□□ 0.24
IL16-202ENST00000360547 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
IL16-202ENST00000360547 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
IL16-202ENST00000360547 WIZO95785 1651 aa16.53■□□□□ 0.24
IL16-202ENST00000360547 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.24
IL16-202ENST00000360547 DAXXQ9UER7 740 aaPredicted RBP16.5■□□□□ 0.23
IL16-202ENST00000360547 EEA1Q15075 1411 aa16.49■□□□□ 0.23
IL16-202ENST00000360547 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
IL16-202ENST00000360547 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
IL16-202ENST00000360547 P3H3Q8IVL6 736 aa16.44■□□□□ 0.22
IL16-202ENST00000360547 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
IL16-202ENST00000360547 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
IL16-202ENST00000360547 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
IL16-202ENST00000360547 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
IL16-202ENST00000360547 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
IL16-202ENST00000360547 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
IL16-202ENST00000360547 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
IL16-202ENST00000360547 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
IL16-202ENST00000360547 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
IL16-202ENST00000360547 CLIP1P30622 1438 aa16.25■□□□□ 0.19
IL16-202ENST00000360547 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
IL16-202ENST00000360547 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
IL16-202ENST00000360547 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
IL16-202ENST00000360547 NCAPD3P42695 1498 aa16.21■□□□□ 0.18
IL16-202ENST00000360547 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
IL16-202ENST00000360547 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
IL16-202ENST00000360547 CUX2O14529 1486 aa16.18■□□□□ 0.18
IL16-202ENST00000360547 SOGA1O94964 1423 aa16.18■□□□□ 0.18
IL16-202ENST00000360547 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
IL16-202ENST00000360547 BICRAQ9NZM4 1560 aa16.12■□□□□ 0.17
IL16-202ENST00000360547 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
IL16-202ENST00000360547 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
IL16-202ENST00000360547 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
IL16-202ENST00000360547 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
IL16-202ENST00000360547 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
IL16-202ENST00000360547 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
IL16-202ENST00000360547 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
IL16-202ENST00000360547 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
IL16-202ENST00000360547 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
IL16-202ENST00000360547 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
IL16-202ENST00000360547 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
IL16-202ENST00000360547 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
IL16-202ENST00000360547 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
IL16-202ENST00000360547 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
IL16-202ENST00000360547 FHAD1B1AJZ9 1412 aa15.92■□□□□ 0.14
IL16-202ENST00000360547 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
IL16-202ENST00000360547 CFTRP13569 1480 aa15.9■□□□□ 0.14
IL16-202ENST00000360547 PLEKHD1A6NEE1 506 aa15.9■□□□□ 0.14
IL16-202ENST00000360547 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
IL16-202ENST00000360547 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
IL16-202ENST00000360547 TSPY4P0CV99 314 aa15.83■□□□□ 0.12
IL16-202ENST00000360547 TSPY10P0CW01 314 aa15.83■□□□□ 0.12
IL16-202ENST00000360547 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
IL16-202ENST00000360547 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms