RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
TRPM3-201ENST00000354500 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.01
TRPM3-201ENST00000354500 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
TRPM3-201ENST00000354500 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
TRPM3-201ENST00000354500 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
TRPM3-201ENST00000354500 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
TRPM3-201ENST00000354500 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
TRPM3-201ENST00000354500 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
TRPM3-201ENST00000354500 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
TRPM3-201ENST00000354500 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
TRPM3-201ENST00000354500 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
TRPM3-201ENST00000354500 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
TRPM3-201ENST00000354500 APLP2Q06481 763 aa19■□□□□ 0.63
TRPM3-201ENST00000354500 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
TRPM3-201ENST00000354500 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
TRPM3-201ENST00000354500 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
TRPM3-201ENST00000354500 HRCP23327 699 aa18.74■□□□□ 0.59
TRPM3-201ENST00000354500 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.58
TRPM3-201ENST00000354500 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
TRPM3-201ENST00000354500 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
TRPM3-201ENST00000354500 YTHDC1Q96MU7 727 aaKnown RBP18.59■□□□□ 0.57
TRPM3-201ENST00000354500 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
TRPM3-201ENST00000354500 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
TRPM3-201ENST00000354500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
TRPM3-201ENST00000354500 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
TRPM3-201ENST00000354500 ITGAEP38570 1179 aa18.35■□□□□ 0.53
TRPM3-201ENST00000354500 ABCC9O60706 1549 aa18.35■□□□□ 0.53
TRPM3-201ENST00000354500 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.53
TRPM3-201ENST00000354500 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
TRPM3-201ENST00000354500 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
TRPM3-201ENST00000354500 NEFLP07196 543 aa17.88■□□□□ 0.45
TRPM3-201ENST00000354500 POLR3GLQ9BT43 218 aa17.86■□□□□ 0.45
TRPM3-201ENST00000354500 ERICH6Q7L0X2 663 aa17.83■□□□□ 0.44
TRPM3-201ENST00000354500 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
TRPM3-201ENST00000354500 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
TRPM3-201ENST00000354500 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
TRPM3-201ENST00000354500 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
TRPM3-201ENST00000354500 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
TRPM3-201ENST00000354500 NEUROD1Q13562 356 aa17.72■□□□□ 0.43
TRPM3-201ENST00000354500 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
TRPM3-201ENST00000354500 P3H3Q8IVL6 736 aa17.65■□□□□ 0.42
TRPM3-201ENST00000354500 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
TRPM3-201ENST00000354500 BCANQ96GW7 911 aa17.6■□□□□ 0.41
TRPM3-201ENST00000354500 FBLN2P98095 1184 aa17.57■□□□□ 0.4
TRPM3-201ENST00000354500 ZNF316A6NFI3 1004 aaPredicted RBP17.55■□□□□ 0.4
TRPM3-201ENST00000354500 ARID3CA6NKF2 412 aa17.55■□□□□ 0.4
TRPM3-201ENST00000354500 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
TRPM3-201ENST00000354500 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
TRPM3-201ENST00000354500 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
TRPM3-201ENST00000354500 ZNF326Q5BKZ1 582 aaKnown RBP17.4■□□□□ 0.38
TRPM3-201ENST00000354500 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
TRPM3-201ENST00000354500 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
TRPM3-201ENST00000354500 ANP32CO43423 234 aa17.25■□□□□ 0.35
TRPM3-201ENST00000354500 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
TRPM3-201ENST00000354500 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
TRPM3-201ENST00000354500 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
TRPM3-201ENST00000354500 MIER1Q8N108 512 aa17.21■□□□□ 0.35
TRPM3-201ENST00000354500 MYT1Q01538 1121 aa17.2■□□□□ 0.34
TRPM3-201ENST00000354500 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
TRPM3-201ENST00000354500 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
TRPM3-201ENST00000354500 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
TRPM3-201ENST00000354500 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
TRPM3-201ENST00000354500 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.33
TRPM3-201ENST00000354500 FKBP8Q14318 412 aa17.07■□□□□ 0.32
TRPM3-201ENST00000354500 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
TRPM3-201ENST00000354500 CLIP1P30622 1438 aa17.05■□□□□ 0.32
TRPM3-201ENST00000354500 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
TRPM3-201ENST00000354500 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRPM3-201ENST00000354500 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
TRPM3-201ENST00000354500 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
TRPM3-201ENST00000354500 SENP3-EIF4A1A0A087X0R7 540 aa16.96■□□□□ 0.31
TRPM3-201ENST00000354500 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.3
TRPM3-201ENST00000354500 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
TRPM3-201ENST00000354500 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
TRPM3-201ENST00000354500 SOGA1O94964 1423 aa16.92■□□□□ 0.3
TRPM3-201ENST00000354500 WRNQ14191 1432 aaPredicted RBP eCLIP16.9■□□□□ 0.3
TRPM3-201ENST00000354500 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
TRPM3-201ENST00000354500 BCL11AQ9H165 835 aa16.88■□□□□ 0.29
TRPM3-201ENST00000354500 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
TRPM3-201ENST00000354500 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
TRPM3-201ENST00000354500 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
TRPM3-201ENST00000354500 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.29
TRPM3-201ENST00000354500 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
TRPM3-201ENST00000354500 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
TRPM3-201ENST00000354500 KDM2AQ9Y2K7 1162 aa16.81■□□□□ 0.28
TRPM3-201ENST00000354500 MTUS2Q5JR59 1369 aa16.81■□□□□ 0.28
TRPM3-201ENST00000354500 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
TRPM3-201ENST00000354500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRPM3-201ENST00000354500 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
TRPM3-201ENST00000354500 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
TRPM3-201ENST00000354500 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
TRPM3-201ENST00000354500 CHGAP10645 457 aaKnown RBP16.74■□□□□ 0.27
TRPM3-201ENST00000354500 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
TRPM3-201ENST00000354500 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
TRPM3-201ENST00000354500 KANK4Q5T7N3 995 aaPredicted RBP16.72■□□□□ 0.27
TRPM3-201ENST00000354500 EEA1Q15075 1411 aa16.72■□□□□ 0.27
TRPM3-201ENST00000354500 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
TRPM3-201ENST00000354500 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
TRPM3-201ENST00000354500 NACADO15069 1562 aa16.67■□□□□ 0.26
TRPM3-201ENST00000354500 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms