RNA–Protein interactions for RNA: ENST00000343317.10

TFEB-202, Transcript of transcription factor EB, humanhuman

TSL 2

Gene TFEB, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFEB-202ENST00000343317 NISCHQ9Y2I1 1504 aa35.25■■■■□ 3.23
TFEB-202ENST00000343317 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
TFEB-202ENST00000343317 SUPT5HO00267 1087 aaKnown RBP30.17■■■□□ 2.42
TFEB-202ENST00000343317 ZCCHC6Q5VYS8 1495 aaKnown RBP29.9■■■□□ 2.38
TFEB-202ENST00000343317 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
TFEB-202ENST00000343317 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
TFEB-202ENST00000343317 CHIC1Q5VXU3 224 aa29.55■■■□□ 2.32
TFEB-202ENST00000343317 HRCP23327 699 aa29.43■■■□□ 2.3
TFEB-202ENST00000343317 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
TFEB-202ENST00000343317 PCGF6Q9BYE7 350 aa29.14■■■□□ 2.25
TFEB-202ENST00000343317 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
TFEB-202ENST00000343317 PPARGC1BQ86YN6 1023 aaKnown RBP28.83■■■□□ 2.21
TFEB-202ENST00000343317 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
TFEB-202ENST00000343317 TRIM26Q12899 539 aaPredicted RBP28.41■■■□□ 2.14
TFEB-202ENST00000343317 ABCC9O60706 1549 aa28.28■■■□□ 2.12
TFEB-202ENST00000343317 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
TFEB-202ENST00000343317 TRIM41Q8WV44 630 aa28.01■■■□□ 2.07
TFEB-202ENST00000343317 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
TFEB-202ENST00000343317 ZEB1P37275 1124 aaPredicted RBP27.93■■■□□ 2.06
TFEB-202ENST00000343317 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
TFEB-202ENST00000343317 FAM9AQ8IZU1 332 aaPredicted RBP27.87■■■□□ 2.05
TFEB-202ENST00000343317 EHMT2Q96KQ7 1210 aa27.68■■■□□ 2.02
TFEB-202ENST00000343317 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
TFEB-202ENST00000343317 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
TFEB-202ENST00000343317 SCAF1Q9H7N4 1312 aaKnown RBP27.46■■□□□ 1.99
TFEB-202ENST00000343317 WIZO95785 1651 aa27.33■■□□□ 1.97
TFEB-202ENST00000343317 NACADO15069 1562 aa27.32■■□□□ 1.96
TFEB-202ENST00000343317 PELP1Q8IZL8 1130 aaKnown RBP27.3■■□□□ 1.96
TFEB-202ENST00000343317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
TFEB-202ENST00000343317 CCER1Q8TC90 406 aaPredicted RBP27.15■■□□□ 1.94
TFEB-202ENST00000343317 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
TFEB-202ENST00000343317 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.93
TFEB-202ENST00000343317 ACIN1Q9UKV3 1341 aaKnown RBP27■■□□□ 1.91
TFEB-202ENST00000343317 NEUROD1Q13562 356 aa26.96■■□□□ 1.91
TFEB-202ENST00000343317 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
TFEB-202ENST00000343317 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
TFEB-202ENST00000343317 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
TFEB-202ENST00000343317 DIEXFQ68CQ4 756 aaKnown RBP26.89■■□□□ 1.9
TFEB-202ENST00000343317 TTBK1Q5TCY1 1321 aaPredicted RBP26.89■■□□□ 1.9
TFEB-202ENST00000343317 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
TFEB-202ENST00000343317 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
TFEB-202ENST00000343317 SOGA1O94964 1423 aa26.81■■□□□ 1.88
TFEB-202ENST00000343317 TNIKQ9UKE5 1360 aa26.77■■□□□ 1.88
TFEB-202ENST00000343317 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
TFEB-202ENST00000343317 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
TFEB-202ENST00000343317 GTF3C3Q9Y5Q9 886 aa26.72■■□□□ 1.87
TFEB-202ENST00000343317 CENPBP07199 599 aaPredicted RBP26.69■■□□□ 1.86
TFEB-202ENST00000343317 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
TFEB-202ENST00000343317 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
TFEB-202ENST00000343317 UBTFP17480 764 aaKnown RBP26.62■■□□□ 1.85
TFEB-202ENST00000343317 EEA1Q15075 1411 aa26.61■■□□□ 1.85
TFEB-202ENST00000343317 ZNF316A6NFI3 1004 aaPredicted RBP26.56■■□□□ 1.84
TFEB-202ENST00000343317 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
TFEB-202ENST00000343317 UNC13AQ9UPW8 1703 aa26.4■■□□□ 1.82
TFEB-202ENST00000343317 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
TFEB-202ENST00000343317 YTHDC1Q96MU7 727 aaKnown RBP26.32■■□□□ 1.8
TFEB-202ENST00000343317 MIER1Q8N108 512 aa26.3■■□□□ 1.8
TFEB-202ENST00000343317 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
TFEB-202ENST00000343317 CLIP1P30622 1438 aa26.25■■□□□ 1.79
TFEB-202ENST00000343317 SYNJ1O43426 1573 aa26.24■■□□□ 1.79
TFEB-202ENST00000343317 KIF21BO75037 1637 aa26.23■■□□□ 1.79
TFEB-202ENST00000343317 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
TFEB-202ENST00000343317 VPS8Q8N3P4 1428 aa26.19■■□□□ 1.78
TFEB-202ENST00000343317 PEG3Q9GZU2 1588 aa26.15■■□□□ 1.78
TFEB-202ENST00000343317 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
TFEB-202ENST00000343317 RAPGEF2Q9Y4G8 1499 aa26.1■■□□□ 1.77
TFEB-202ENST00000343317 BAZ1BQ9UIG0 1483 aaKnown RBP26.08■■□□□ 1.76
TFEB-202ENST00000343317 APLP2Q06481 763 aa26.07■■□□□ 1.76
TFEB-202ENST00000343317 RANGAP1P46060 587 aaPredicted RBP26.04■■□□□ 1.76
TFEB-202ENST00000343317 MYT1Q01538 1121 aa26■■□□□ 1.75
TFEB-202ENST00000343317 ATAD2BQ9ULI0 1458 aa25.97■■□□□ 1.75
TFEB-202ENST00000343317 DHX57Q6P158 1386 aaKnown RBP25.88■■□□□ 1.73
TFEB-202ENST00000343317 CLSPNQ9HAW4 1339 aa25.85■■□□□ 1.73
TFEB-202ENST00000343317 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
TFEB-202ENST00000343317 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
TFEB-202ENST00000343317 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
TFEB-202ENST00000343317 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
TFEB-202ENST00000343317 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
TFEB-202ENST00000343317 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
TFEB-202ENST00000343317 RRBP1Q9P2E9 1410 aaKnown RBP25.66■■□□□ 1.7
TFEB-202ENST00000343317 SUPT16HQ9Y5B9 1047 aaKnown RBP25.62■■□□□ 1.69
TFEB-202ENST00000343317 CUX2O14529 1486 aa25.57■■□□□ 1.68
TFEB-202ENST00000343317 CCNB3Q8WWL7 1395 aa25.53■■□□□ 1.68
TFEB-202ENST00000343317 CUX1P39880 1505 aa25.53■■□□□ 1.68
TFEB-202ENST00000343317 KIF27Q86VH2 1401 aa25.5■■□□□ 1.67
TFEB-202ENST00000343317 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
TFEB-202ENST00000343317 ITGAEP38570 1179 aa25.47■■□□□ 1.67
TFEB-202ENST00000343317 KCNH8Q96L42 1107 aa25.4■■□□□ 1.66
TFEB-202ENST00000343317 RAB3GAP2Q9H2M9 1393 aa25.39■■□□□ 1.66
TFEB-202ENST00000343317 MAPKBP1O60336 1514 aa25.36■■□□□ 1.65
TFEB-202ENST00000343317 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
TFEB-202ENST00000343317 TSHZ2Q9NRE2 1034 aa25.33■■□□□ 1.65
TFEB-202ENST00000343317 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
TFEB-202ENST00000343317 CFTRP13569 1480 aa25.3■■□□□ 1.64
TFEB-202ENST00000343317 IGF1RP08069 1367 aa25.25■■□□□ 1.63
TFEB-202ENST00000343317 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
TFEB-202ENST00000343317 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
TFEB-202ENST00000343317 MAP3K1Q13233 1512 aa25.21■■□□□ 1.63
TFEB-202ENST00000343317 SIN3AQ96ST3 1273 aa25.21■■□□□ 1.63
TFEB-202ENST00000343317 PHLDB1Q86UU1 1377 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms