RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
COL22A1-202ENST00000341807 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
COL22A1-202ENST00000341807 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.26
COL22A1-202ENST00000341807 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
COL22A1-202ENST00000341807 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
COL22A1-202ENST00000341807 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
COL22A1-202ENST00000341807 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
COL22A1-202ENST00000341807 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
COL22A1-202ENST00000341807 HRCP23327 699 aa21.59■■□□□ 1.05
COL22A1-202ENST00000341807 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
COL22A1-202ENST00000341807 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
COL22A1-202ENST00000341807 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
COL22A1-202ENST00000341807 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
COL22A1-202ENST00000341807 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
COL22A1-202ENST00000341807 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
COL22A1-202ENST00000341807 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
COL22A1-202ENST00000341807 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
COL22A1-202ENST00000341807 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
COL22A1-202ENST00000341807 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
COL22A1-202ENST00000341807 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
COL22A1-202ENST00000341807 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
COL22A1-202ENST00000341807 ABCC9O60706 1549 aa20.62■□□□□ 0.89
COL22A1-202ENST00000341807 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
COL22A1-202ENST00000341807 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
COL22A1-202ENST00000341807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
COL22A1-202ENST00000341807 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
COL22A1-202ENST00000341807 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
COL22A1-202ENST00000341807 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
COL22A1-202ENST00000341807 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
COL22A1-202ENST00000341807 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
COL22A1-202ENST00000341807 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
COL22A1-202ENST00000341807 WIZO95785 1651 aa20.08■□□□□ 0.8
COL22A1-202ENST00000341807 NACADO15069 1562 aa20.05■□□□□ 0.8
COL22A1-202ENST00000341807 DIEXFQ68CQ4 756 aaKnown RBP20■□□□□ 0.79
COL22A1-202ENST00000341807 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
COL22A1-202ENST00000341807 YTHDC1Q96MU7 727 aaKnown RBP19.94■□□□□ 0.78
COL22A1-202ENST00000341807 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
COL22A1-202ENST00000341807 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
COL22A1-202ENST00000341807 CENPBP07199 599 aaPredicted RBP19.9■□□□□ 0.78
COL22A1-202ENST00000341807 APLP2Q06481 763 aa19.9■□□□□ 0.78
COL22A1-202ENST00000341807 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
COL22A1-202ENST00000341807 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
COL22A1-202ENST00000341807 SOGA1O94964 1423 aa19.86■□□□□ 0.77
COL22A1-202ENST00000341807 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
COL22A1-202ENST00000341807 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
COL22A1-202ENST00000341807 CEP162Q5TB80 1403 aa19.84■□□□□ 0.77
COL22A1-202ENST00000341807 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.76
COL22A1-202ENST00000341807 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
COL22A1-202ENST00000341807 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
COL22A1-202ENST00000341807 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
COL22A1-202ENST00000341807 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
COL22A1-202ENST00000341807 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
COL22A1-202ENST00000341807 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
COL22A1-202ENST00000341807 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
COL22A1-202ENST00000341807 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
COL22A1-202ENST00000341807 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
COL22A1-202ENST00000341807 ITGAEP38570 1179 aa19.53■□□□□ 0.72
COL22A1-202ENST00000341807 EEA1Q15075 1411 aa19.52■□□□□ 0.71
COL22A1-202ENST00000341807 MIER1Q8N108 512 aa19.51■□□□□ 0.71
COL22A1-202ENST00000341807 CLIP1P30622 1438 aa19.5■□□□□ 0.71
COL22A1-202ENST00000341807 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
COL22A1-202ENST00000341807 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
COL22A1-202ENST00000341807 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
COL22A1-202ENST00000341807 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
COL22A1-202ENST00000341807 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
COL22A1-202ENST00000341807 VPS8Q8N3P4 1428 aa19.27■□□□□ 0.68
COL22A1-202ENST00000341807 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
COL22A1-202ENST00000341807 SYNJ1O43426 1573 aa19.22■□□□□ 0.67
COL22A1-202ENST00000341807 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
COL22A1-202ENST00000341807 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
COL22A1-202ENST00000341807 P3H3Q8IVL6 736 aa19.14■□□□□ 0.66
COL22A1-202ENST00000341807 FAM50AQ14320 339 aaKnown RBP19.12■□□□□ 0.65
COL22A1-202ENST00000341807 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
COL22A1-202ENST00000341807 KIF21BO75037 1637 aa19.05■□□□□ 0.64
COL22A1-202ENST00000341807 DHX57Q6P158 1386 aaKnown RBP19.01■□□□□ 0.63
COL22A1-202ENST00000341807 BCANQ96GW7 911 aa18.98■□□□□ 0.63
COL22A1-202ENST00000341807 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
COL22A1-202ENST00000341807 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
COL22A1-202ENST00000341807 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
COL22A1-202ENST00000341807 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
COL22A1-202ENST00000341807 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
COL22A1-202ENST00000341807 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
COL22A1-202ENST00000341807 ARAP1Q96P48 1450 aa18.89■□□□□ 0.62
COL22A1-202ENST00000341807 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
COL22A1-202ENST00000341807 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
COL22A1-202ENST00000341807 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
COL22A1-202ENST00000341807 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
COL22A1-202ENST00000341807 MYT1Q01538 1121 aa18.83■□□□□ 0.61
COL22A1-202ENST00000341807 TOP2BQ02880 1626 aa18.83■□□□□ 0.61
COL22A1-202ENST00000341807 CUX2O14529 1486 aa18.83■□□□□ 0.6
COL22A1-202ENST00000341807 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
COL22A1-202ENST00000341807 CUX1P39880 1505 aa18.76■□□□□ 0.59
COL22A1-202ENST00000341807 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
COL22A1-202ENST00000341807 NEFLP07196 543 aa18.76■□□□□ 0.59
COL22A1-202ENST00000341807 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
COL22A1-202ENST00000341807 FKBP8Q14318 412 aa18.75■□□□□ 0.59
COL22A1-202ENST00000341807 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
COL22A1-202ENST00000341807 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
COL22A1-202ENST00000341807 IGF1RP08069 1367 aa18.71■□□□□ 0.59
COL22A1-202ENST00000341807 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms