RNA–Protein interactions for RNA: ENST00000338548.4

PSMD10-202, Transcript of proteasome 26S subunit, non-ATPase 10, humanhuman

TSL 2

Gene PSMD10, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD10-202ENST00000338548 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
PSMD10-202ENST00000338548 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
PSMD10-202ENST00000338548 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
PSMD10-202ENST00000338548 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
PSMD10-202ENST00000338548 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
PSMD10-202ENST00000338548 FOXD1Q16676 465 aa14.12□□□□□ -0.15
PSMD10-202ENST00000338548 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
PSMD10-202ENST00000338548 ADRA2BP18089 450 aa13.67□□□□□ -0.22
PSMD10-202ENST00000338548 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
PSMD10-202ENST00000338548 NISCHQ9Y2I1 1504 aa13.01□□□□□ -0.33
PSMD10-202ENST00000338548 MSH5O43196 834 aa12.92□□□□□ -0.34
PSMD10-202ENST00000338548 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
PSMD10-202ENST00000338548 KCNA4P22459 653 aa12.54□□□□□ -0.4
PSMD10-202ENST00000338548 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
PSMD10-202ENST00000338548 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
PSMD10-202ENST00000338548 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
PSMD10-202ENST00000338548 ABCC9O60706 1549 aa12.29□□□□□ -0.44
PSMD10-202ENST00000338548 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.45
PSMD10-202ENST00000338548 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.45
PSMD10-202ENST00000338548 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
PSMD10-202ENST00000338548 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
PSMD10-202ENST00000338548 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
PSMD10-202ENST00000338548 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
PSMD10-202ENST00000338548 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
PSMD10-202ENST00000338548 EHMT2Q96KQ7 1210 aa11.74□□□□□ -0.53
PSMD10-202ENST00000338548 CCDC180Q9P1Z9 1646 aa11.67□□□□□ -0.54
PSMD10-202ENST00000338548 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
PSMD10-202ENST00000338548 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
PSMD10-202ENST00000338548 ZBTB22O15209 634 aa11.57□□□□□ -0.56
PSMD10-202ENST00000338548 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
PSMD10-202ENST00000338548 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
PSMD10-202ENST00000338548 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
PSMD10-202ENST00000338548 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
PSMD10-202ENST00000338548 RB1CC1Q8TDY2 1594 aa11.38□□□□□ -0.59
PSMD10-202ENST00000338548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSMD10-202ENST00000338548 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
PSMD10-202ENST00000338548 MYCNP04198 464 aaPredicted RBP11.24□□□□□ -0.61
PSMD10-202ENST00000338548 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
PSMD10-202ENST00000338548 NACADO15069 1562 aa11.22□□□□□ -0.61
PSMD10-202ENST00000338548 DNAJC5Q9H3Z4 198 aa11.22□□□□□ -0.61
PSMD10-202ENST00000338548 BICRAQ9NZM4 1560 aa11.12□□□□□ -0.63
PSMD10-202ENST00000338548 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
PSMD10-202ENST00000338548 CECR2Q9BXF3 1484 aa11.08□□□□□ -0.64
PSMD10-202ENST00000338548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.04□□□□□ -0.64
PSMD10-202ENST00000338548 HNRNPUL2Q1KMD3 747 aaKnown RBP11.04□□□□□ -0.64
PSMD10-202ENST00000338548 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
PSMD10-202ENST00000338548 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
PSMD10-202ENST00000338548 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
PSMD10-202ENST00000338548 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
PSMD10-202ENST00000338548 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
PSMD10-202ENST00000338548 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
PSMD10-202ENST00000338548 MYO15BQ96JP2 1530 aa10.93□□□□□ -0.66
PSMD10-202ENST00000338548 SPINK5Q9NQ38 1064 aaPredicted RBP10.89□□□□□ -0.67
PSMD10-202ENST00000338548 APLP2Q06481 763 aa10.88□□□□□ -0.67
PSMD10-202ENST00000338548 EIF4G1Q04637 1599 aaKnown RBP10.87□□□□□ -0.67
PSMD10-202ENST00000338548 SHROOM4Q9ULL8 1493 aa10.85□□□□□ -0.67
PSMD10-202ENST00000338548 CAPN15O75808 1086 aa10.8□□□□□ -0.68
PSMD10-202ENST00000338548 TRHP20396 242 aaPredicted RBP10.79□□□□□ -0.68
PSMD10-202ENST00000338548 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
PSMD10-202ENST00000338548 SCRIBQ14160 1630 aa10.75□□□□□ -0.69
PSMD10-202ENST00000338548 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
PSMD10-202ENST00000338548 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
PSMD10-202ENST00000338548 CUX2O14529 1486 aa10.66□□□□□ -0.7
PSMD10-202ENST00000338548 DCAF1Q9Y4B6 1507 aa10.65□□□□□ -0.7
PSMD10-202ENST00000338548 ABCB7O75027 752 aa10.64□□□□□ -0.71
PSMD10-202ENST00000338548 POLA2Q14181 598 aa10.64□□□□□ -0.71
PSMD10-202ENST00000338548 DSG3P32926 999 aa10.62□□□□□ -0.71
PSMD10-202ENST00000338548 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
PSMD10-202ENST00000338548 ERCC6Q03468 1493 aa10.59□□□□□ -0.71
PSMD10-202ENST00000338548 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
PSMD10-202ENST00000338548 NESP48681 1621 aa10.45□□□□□ -0.74
PSMD10-202ENST00000338548 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
PSMD10-202ENST00000338548 FBLN2P98095 1184 aa10.44□□□□□ -0.74
PSMD10-202ENST00000338548 FKBP8Q14318 412 aa10.43□□□□□ -0.74
PSMD10-202ENST00000338548 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
PSMD10-202ENST00000338548 ATAD2BQ9ULI0 1458 aa10.37□□□□□ -0.75
PSMD10-202ENST00000338548 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
PSMD10-202ENST00000338548 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
PSMD10-202ENST00000338548 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
PSMD10-202ENST00000338548 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
PSMD10-202ENST00000338548 HMGXB3Q12766 1538 aa10.25□□□□□ -0.77
PSMD10-202ENST00000338548 PDS5BQ9NTI5 1447 aa10.22□□□□□ -0.77
PSMD10-202ENST00000338548 BAZ1BQ9UIG0 1483 aaKnown RBP10.22□□□□□ -0.77
PSMD10-202ENST00000338548 SMARCA4P51532 1647 aa10.18□□□□□ -0.78
PSMD10-202ENST00000338548 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
PSMD10-202ENST00000338548 SPDYE2BA6NHP3 402 aa10.17□□□□□ -0.78
PSMD10-202ENST00000338548 SPDYE6P0CI01 402 aa10.17□□□□□ -0.78
PSMD10-202ENST00000338548 SPDYE2Q495Y8 402 aa10.17□□□□□ -0.78
PSMD10-202ENST00000338548 PROM2Q8N271 834 aa10.16□□□□□ -0.78
PSMD10-202ENST00000338548 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
PSMD10-202ENST00000338548 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
PSMD10-202ENST00000338548 SSUH2Q9Y2M2 353 aa10.14□□□□□ -0.79
PSMD10-202ENST00000338548 MRC2Q9UBG0 1479 aa10.14□□□□□ -0.79
PSMD10-202ENST00000338548 KIF21AQ7Z4S6 1674 aa10.13□□□□□ -0.79
PSMD10-202ENST00000338548 WDR62O43379 1518 aa10.1□□□□□ -0.79
PSMD10-202ENST00000338548 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
PSMD10-202ENST00000338548 PEG3Q9GZU2 1588 aa10.06□□□□□ -0.8
PSMD10-202ENST00000338548 MROH2BQ7Z745 1585 aa10.05□□□□□ -0.8
PSMD10-202ENST00000338548 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
PSMD10-202ENST00000338548 CYB5RLQ6IPT4 315 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms