RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
FNDC1-202ENST00000329629 NISCHQ9Y2I1 1504 aa23.34■■□□□ 1.33
FNDC1-202ENST00000329629 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
FNDC1-202ENST00000329629 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
FNDC1-202ENST00000329629 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
FNDC1-202ENST00000329629 SHROOM4Q9ULL8 1493 aa22.49■■□□□ 1.19
FNDC1-202ENST00000329629 ERICH6Q7L0X2 663 aa22.01■■□□□ 1.11
FNDC1-202ENST00000329629 APLP2Q06481 763 aa21.93■■□□□ 1.1
FNDC1-202ENST00000329629 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
FNDC1-202ENST00000329629 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
FNDC1-202ENST00000329629 CENPBP07199 599 aaPredicted RBP21.72■■□□□ 1.07
FNDC1-202ENST00000329629 CCER1Q8TC90 406 aaPredicted RBP21.7■■□□□ 1.06
FNDC1-202ENST00000329629 FAM9AQ8IZU1 332 aaPredicted RBP21.67■■□□□ 1.06
FNDC1-202ENST00000329629 YTHDC1Q96MU7 727 aaKnown RBP21.39■■□□□ 1.01
FNDC1-202ENST00000329629 RANGAP1P46060 587 aaPredicted RBP21.38■■□□□ 1.01
FNDC1-202ENST00000329629 MYT1Q01538 1121 aa21.38■■□□□ 1.01
FNDC1-202ENST00000329629 ZEB1P37275 1124 aaPredicted RBP21.37■■□□□ 1.01
FNDC1-202ENST00000329629 NEFLP07196 543 aa21.3■■□□□ 1
FNDC1-202ENST00000329629 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
FNDC1-202ENST00000329629 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
FNDC1-202ENST00000329629 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
FNDC1-202ENST00000329629 DAXXQ9UER7 740 aaPredicted RBP20.86■□□□□ 0.93
FNDC1-202ENST00000329629 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
FNDC1-202ENST00000329629 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
FNDC1-202ENST00000329629 HRCP23327 699 aa20.58■□□□□ 0.89
FNDC1-202ENST00000329629 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
FNDC1-202ENST00000329629 ABCC9O60706 1549 aa20.55■□□□□ 0.88
FNDC1-202ENST00000329629 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
FNDC1-202ENST00000329629 MYT1LQ9UL68 1186 aa20.5■□□□□ 0.87
FNDC1-202ENST00000329629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
FNDC1-202ENST00000329629 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
FNDC1-202ENST00000329629 ITGAEP38570 1179 aa20.48■□□□□ 0.87
FNDC1-202ENST00000329629 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
FNDC1-202ENST00000329629 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
FNDC1-202ENST00000329629 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
FNDC1-202ENST00000329629 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
FNDC1-202ENST00000329629 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
FNDC1-202ENST00000329629 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
FNDC1-202ENST00000329629 DIEXFQ68CQ4 756 aaKnown RBP20.15■□□□□ 0.82
FNDC1-202ENST00000329629 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
FNDC1-202ENST00000329629 BCANQ96GW7 911 aa20.12■□□□□ 0.81
FNDC1-202ENST00000329629 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
FNDC1-202ENST00000329629 FBLN2P98095 1184 aa19.9■□□□□ 0.78
FNDC1-202ENST00000329629 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
FNDC1-202ENST00000329629 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
FNDC1-202ENST00000329629 FAM50AQ14320 339 aaKnown RBP19.8■□□□□ 0.76
FNDC1-202ENST00000329629 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
FNDC1-202ENST00000329629 BCL11AQ9H165 835 aa19.76■□□□□ 0.75
FNDC1-202ENST00000329629 ZBTB47Q9UFB7 747 aaPredicted RBP19.72■□□□□ 0.75
FNDC1-202ENST00000329629 ANP32CO43423 234 aa19.72■□□□□ 0.75
FNDC1-202ENST00000329629 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
FNDC1-202ENST00000329629 EIF5BO60841 1220 aaKnown RBP19.64■□□□□ 0.73
FNDC1-202ENST00000329629 CANXP27824 592 aaKnown RBP19.63■□□□□ 0.73
FNDC1-202ENST00000329629 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
FNDC1-202ENST00000329629 ANP32AP39687 249 aaKnown RBP19.59■□□□□ 0.73
FNDC1-202ENST00000329629 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
FNDC1-202ENST00000329629 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
FNDC1-202ENST00000329629 ACIN1Q9UKV3 1341 aaKnown RBP19.52■□□□□ 0.72
FNDC1-202ENST00000329629 ARID3CA6NKF2 412 aa19.46■□□□□ 0.71
FNDC1-202ENST00000329629 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
FNDC1-202ENST00000329629 ANP32BQ92688 251 aaKnown RBP19.38■□□□□ 0.69
FNDC1-202ENST00000329629 FKBP8Q14318 412 aa19.35■□□□□ 0.69
FNDC1-202ENST00000329629 NEFMP07197 916 aa19.32■□□□□ 0.68
FNDC1-202ENST00000329629 ZNF777Q9ULD5 760 aaPredicted RBP19.31■□□□□ 0.68
FNDC1-202ENST00000329629 GLIPR1L2Q4G1C9 344 aa19.29■□□□□ 0.68
FNDC1-202ENST00000329629 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
FNDC1-202ENST00000329629 HSP90AA1P07900 732 aaKnown RBP19.29■□□□□ 0.68
FNDC1-202ENST00000329629 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
FNDC1-202ENST00000329629 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
FNDC1-202ENST00000329629 NBR1Q14596 966 aa19.27■□□□□ 0.68
FNDC1-202ENST00000329629 ESF1Q9H501 851 aaKnown RBP19.27■□□□□ 0.68
FNDC1-202ENST00000329629 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
FNDC1-202ENST00000329629 ARXQ96QS3 562 aa19.23■□□□□ 0.67
FNDC1-202ENST00000329629 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
FNDC1-202ENST00000329629 UPF2Q9HAU5 1272 aaKnown RBP19.15■□□□□ 0.66
FNDC1-202ENST00000329629 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
FNDC1-202ENST00000329629 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.65
FNDC1-202ENST00000329629 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
FNDC1-202ENST00000329629 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
FNDC1-202ENST00000329629 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.65
FNDC1-202ENST00000329629 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
FNDC1-202ENST00000329629 CHGAP10645 457 aaKnown RBP19.03■□□□□ 0.64
FNDC1-202ENST00000329629 CCDC136Q96JN2 1154 aa19.01■□□□□ 0.63
FNDC1-202ENST00000329629 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
FNDC1-202ENST00000329629 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
FNDC1-202ENST00000329629 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
FNDC1-202ENST00000329629 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.89■□□□□ 0.61
FNDC1-202ENST00000329629 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
FNDC1-202ENST00000329629 NACADO15069 1562 aa18.89■□□□□ 0.61
FNDC1-202ENST00000329629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
FNDC1-202ENST00000329629 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
FNDC1-202ENST00000329629 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
FNDC1-202ENST00000329629 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
FNDC1-202ENST00000329629 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
FNDC1-202ENST00000329629 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
FNDC1-202ENST00000329629 BAZ1BQ9UIG0 1483 aaKnown RBP18.79■□□□□ 0.6
FNDC1-202ENST00000329629 WDR43Q15061 677 aaKnown RBP eCLIP18.79■□□□□ 0.6
FNDC1-202ENST00000329629 TRIM44Q96DX7 344 aaPredicted RBP18.77■□□□□ 0.6
FNDC1-202ENST00000329629 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
FNDC1-202ENST00000329629 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms