RNA–Protein interactions for RNA: ENST00000260604.8

PNPT1-201, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-201ENST00000260604 NISCHQ9Y2I1 1504 aa17.23■□□□□ 0.35
PNPT1-201ENST00000260604 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
PNPT1-201ENST00000260604 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
PNPT1-201ENST00000260604 SUPT5HO00267 1087 aaKnown RBP15.63■□□□□ 0.09
PNPT1-201ENST00000260604 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
PNPT1-201ENST00000260604 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
PNPT1-201ENST00000260604 CHIC1Q5VXU3 224 aa14.65□□□□□ -0.06
PNPT1-201ENST00000260604 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
PNPT1-201ENST00000260604 LOC105371045A0A1W2PR82 267 aa14.58□□□□□ -0.07
PNPT1-201ENST00000260604 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
PNPT1-201ENST00000260604 PPARGC1BQ86YN6 1023 aaKnown RBP14.36□□□□□ -0.11
PNPT1-201ENST00000260604 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
PNPT1-201ENST00000260604 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
PNPT1-201ENST00000260604 TTBK1Q5TCY1 1321 aaPredicted RBP14.3□□□□□ -0.12
PNPT1-201ENST00000260604 HRCP23327 699 aa14.26□□□□□ -0.13
PNPT1-201ENST00000260604 ABCC9O60706 1549 aa14.16□□□□□ -0.14
PNPT1-201ENST00000260604 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
PNPT1-201ENST00000260604 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.17
PNPT1-201ENST00000260604 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
PNPT1-201ENST00000260604 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
PNPT1-201ENST00000260604 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
PNPT1-201ENST00000260604 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
PNPT1-201ENST00000260604 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
PNPT1-201ENST00000260604 CCER1Q8TC90 406 aaPredicted RBP13.82□□□□□ -0.2
PNPT1-201ENST00000260604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
PNPT1-201ENST00000260604 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
PNPT1-201ENST00000260604 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
PNPT1-201ENST00000260604 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
PNPT1-201ENST00000260604 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
PNPT1-201ENST00000260604 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
PNPT1-201ENST00000260604 APLP2Q06481 763 aa13.57□□□□□ -0.24
PNPT1-201ENST00000260604 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
PNPT1-201ENST00000260604 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.24
PNPT1-201ENST00000260604 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
PNPT1-201ENST00000260604 WIZO95785 1651 aa13.43□□□□□ -0.26
PNPT1-201ENST00000260604 ITGAEP38570 1179 aa13.43□□□□□ -0.26
PNPT1-201ENST00000260604 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
PNPT1-201ENST00000260604 NACADO15069 1562 aa13.38□□□□□ -0.27
PNPT1-201ENST00000260604 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
PNPT1-201ENST00000260604 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
PNPT1-201ENST00000260604 SOGA1O94964 1423 aa13.35□□□□□ -0.27
PNPT1-201ENST00000260604 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
PNPT1-201ENST00000260604 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
PNPT1-201ENST00000260604 CEP162Q5TB80 1403 aa13.26□□□□□ -0.29
PNPT1-201ENST00000260604 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
PNPT1-201ENST00000260604 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
PNPT1-201ENST00000260604 BAZ1AQ9NRL2 1556 aaPredicted RBP13.23□□□□□ -0.29
PNPT1-201ENST00000260604 NEUROD1Q13562 356 aa13.2□□□□□ -0.3
PNPT1-201ENST00000260604 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
PNPT1-201ENST00000260604 P3H3Q8IVL6 736 aa13.18□□□□□ -0.3
PNPT1-201ENST00000260604 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
PNPT1-201ENST00000260604 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
PNPT1-201ENST00000260604 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
PNPT1-201ENST00000260604 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
PNPT1-201ENST00000260604 CLIP1P30622 1438 aa13.08□□□□□ -0.32
PNPT1-201ENST00000260604 FAM50AQ14320 339 aaKnown RBP13.06□□□□□ -0.32
PNPT1-201ENST00000260604 MIER1Q8N108 512 aa13.05□□□□□ -0.32
PNPT1-201ENST00000260604 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
PNPT1-201ENST00000260604 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
PNPT1-201ENST00000260604 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
PNPT1-201ENST00000260604 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.32
PNPT1-201ENST00000260604 SMARCA2P51531 1590 aa13□□□□□ -0.33
PNPT1-201ENST00000260604 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
PNPT1-201ENST00000260604 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
PNPT1-201ENST00000260604 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
PNPT1-201ENST00000260604 EEA1Q15075 1411 aa12.93□□□□□ -0.34
PNPT1-201ENST00000260604 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
PNPT1-201ENST00000260604 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
PNPT1-201ENST00000260604 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
PNPT1-201ENST00000260604 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.35
PNPT1-201ENST00000260604 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
PNPT1-201ENST00000260604 BCANQ96GW7 911 aa12.85□□□□□ -0.35
PNPT1-201ENST00000260604 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
PNPT1-201ENST00000260604 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
PNPT1-201ENST00000260604 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
PNPT1-201ENST00000260604 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
PNPT1-201ENST00000260604 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.37
PNPT1-201ENST00000260604 KIF27Q86VH2 1401 aa12.76□□□□□ -0.37
PNPT1-201ENST00000260604 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
PNPT1-201ENST00000260604 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
PNPT1-201ENST00000260604 POLR3GLQ9BT43 218 aa12.74□□□□□ -0.37
PNPT1-201ENST00000260604 CUX2O14529 1486 aa12.73□□□□□ -0.37
PNPT1-201ENST00000260604 TRIM52Q96A61 297 aa12.73□□□□□ -0.37
PNPT1-201ENST00000260604 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.37
PNPT1-201ENST00000260604 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
PNPT1-201ENST00000260604 FBLN2P98095 1184 aa12.67□□□□□ -0.38
PNPT1-201ENST00000260604 CARMIL1Q5VZK9 1371 aa12.67□□□□□ -0.38
PNPT1-201ENST00000260604 CCNB3Q8WWL7 1395 aa12.67□□□□□ -0.38
PNPT1-201ENST00000260604 KIF21BO75037 1637 aa12.66□□□□□ -0.38
PNPT1-201ENST00000260604 DHX57Q6P158 1386 aaKnown RBP12.64□□□□□ -0.39
PNPT1-201ENST00000260604 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
PNPT1-201ENST00000260604 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
PNPT1-201ENST00000260604 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
PNPT1-201ENST00000260604 NEFLP07196 543 aa12.61□□□□□ -0.39
PNPT1-201ENST00000260604 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
PNPT1-201ENST00000260604 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
PNPT1-201ENST00000260604 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
PNPT1-201ENST00000260604 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
PNPT1-201ENST00000260604 IGF1RP08069 1367 aa12.58□□□□□ -0.4
PNPT1-201ENST00000260604 MTUS2Q5JR59 1369 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms