RNA–Protein interactions for RNA: ENST00000187830.2

PVR-201, Transcript of poliovirus receptor, humanhuman

TSL 2

Gene PVR, Length 3,132 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVR-201ENST00000187830 NISCHQ9Y2I1 1504 aa27.69■■■□□ 2.02
PVR-201ENST00000187830 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
PVR-201ENST00000187830 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
PVR-201ENST00000187830 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
PVR-201ENST00000187830 PCGF6Q9BYE7 350 aa23.87■■□□□ 1.41
PVR-201ENST00000187830 HRCP23327 699 aa23.77■■□□□ 1.4
PVR-201ENST00000187830 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
PVR-201ENST00000187830 MYO15BQ96JP2 1530 aa23.71■■□□□ 1.39
PVR-201ENST00000187830 PPARGC1BQ86YN6 1023 aaKnown RBP23.69■■□□□ 1.38
PVR-201ENST00000187830 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
PVR-201ENST00000187830 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
PVR-201ENST00000187830 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.3
PVR-201ENST00000187830 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
PVR-201ENST00000187830 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
PVR-201ENST00000187830 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
PVR-201ENST00000187830 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
PVR-201ENST00000187830 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
PVR-201ENST00000187830 TTBK1Q5TCY1 1321 aaPredicted RBP22.43■■□□□ 1.18
PVR-201ENST00000187830 ZEB1P37275 1124 aaPredicted RBP22.42■■□□□ 1.18
PVR-201ENST00000187830 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
PVR-201ENST00000187830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
PVR-201ENST00000187830 ABCC9O60706 1549 aa22.3■■□□□ 1.16
PVR-201ENST00000187830 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
PVR-201ENST00000187830 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
PVR-201ENST00000187830 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
PVR-201ENST00000187830 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
PVR-201ENST00000187830 PELP1Q8IZL8 1130 aaKnown RBP22.07■■□□□ 1.12
PVR-201ENST00000187830 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
PVR-201ENST00000187830 CECR2Q9BXF3 1484 aa21.92■■□□□ 1.1
PVR-201ENST00000187830 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
PVR-201ENST00000187830 ACIN1Q9UKV3 1341 aaKnown RBP21.88■■□□□ 1.09
PVR-201ENST00000187830 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
PVR-201ENST00000187830 YTHDC1Q96MU7 727 aaKnown RBP21.83■■□□□ 1.08
PVR-201ENST00000187830 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
PVR-201ENST00000187830 CENPBP07199 599 aaPredicted RBP21.72■■□□□ 1.07
PVR-201ENST00000187830 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
PVR-201ENST00000187830 RANGAP1P46060 587 aaPredicted RBP21.65■■□□□ 1.06
PVR-201ENST00000187830 WIZO95785 1651 aa21.63■■□□□ 1.05
PVR-201ENST00000187830 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
PVR-201ENST00000187830 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
PVR-201ENST00000187830 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
PVR-201ENST00000187830 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
PVR-201ENST00000187830 NACADO15069 1562 aa21.47■■□□□ 1.03
PVR-201ENST00000187830 SOGA1O94964 1423 aa21.47■■□□□ 1.03
PVR-201ENST00000187830 ZNF316A6NFI3 1004 aaPredicted RBP21.46■■□□□ 1.03
PVR-201ENST00000187830 CEP162Q5TB80 1403 aa21.46■■□□□ 1.03
PVR-201ENST00000187830 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
PVR-201ENST00000187830 MIER1Q8N108 512 aa21.4■■□□□ 1.02
PVR-201ENST00000187830 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
PVR-201ENST00000187830 APLP2Q06481 763 aa21.25■□□□□ 0.99
PVR-201ENST00000187830 MYT1Q01538 1121 aa21.24■□□□□ 0.99
PVR-201ENST00000187830 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
PVR-201ENST00000187830 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
PVR-201ENST00000187830 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
PVR-201ENST00000187830 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.96
PVR-201ENST00000187830 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
PVR-201ENST00000187830 ITGAEP38570 1179 aa21.04■□□□□ 0.96
PVR-201ENST00000187830 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
PVR-201ENST00000187830 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
PVR-201ENST00000187830 CLIP1P30622 1438 aa21.01■□□□□ 0.95
PVR-201ENST00000187830 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
PVR-201ENST00000187830 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
PVR-201ENST00000187830 EEA1Q15075 1411 aa20.92■□□□□ 0.94
PVR-201ENST00000187830 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.92
PVR-201ENST00000187830 RAPGEF2Q9Y4G8 1499 aa20.82■□□□□ 0.92
PVR-201ENST00000187830 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
PVR-201ENST00000187830 BCANQ96GW7 911 aa20.81■□□□□ 0.92
PVR-201ENST00000187830 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
PVR-201ENST00000187830 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
PVR-201ENST00000187830 BICRAQ9NZM4 1560 aa20.78■□□□□ 0.92
PVR-201ENST00000187830 KCNH8Q96L42 1107 aa20.77■□□□□ 0.92
PVR-201ENST00000187830 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
PVR-201ENST00000187830 DHX57Q6P158 1386 aaKnown RBP20.69■□□□□ 0.9
PVR-201ENST00000187830 ATP1B4Q9UN42 357 aaPredicted RBP20.65■□□□□ 0.9
PVR-201ENST00000187830 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.9
PVR-201ENST00000187830 KIF21BO75037 1637 aa20.61■□□□□ 0.89
PVR-201ENST00000187830 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.89
PVR-201ENST00000187830 TSHZ2Q9NRE2 1034 aa20.55■□□□□ 0.88
PVR-201ENST00000187830 FAM50AQ14320 339 aaKnown RBP20.52■□□□□ 0.88
PVR-201ENST00000187830 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
PVR-201ENST00000187830 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.88
PVR-201ENST00000187830 FKBP8Q14318 412 aa20.51■□□□□ 0.87
PVR-201ENST00000187830 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
PVR-201ENST00000187830 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
PVR-201ENST00000187830 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
PVR-201ENST00000187830 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.87
PVR-201ENST00000187830 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
PVR-201ENST00000187830 CCNB3Q8WWL7 1395 aa20.43■□□□□ 0.86
PVR-201ENST00000187830 RAB3GAP2Q9H2M9 1393 aa20.38■□□□□ 0.85
PVR-201ENST00000187830 NEFLP07196 543 aa20.33■□□□□ 0.85
PVR-201ENST00000187830 ANP32EQ9BTT0 268 aa20.31■□□□□ 0.84
PVR-201ENST00000187830 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
PVR-201ENST00000187830 KIF27Q86VH2 1401 aa20.26■□□□□ 0.83
PVR-201ENST00000187830 RRBP1Q9P2E9 1410 aaKnown RBP20.26■□□□□ 0.83
PVR-201ENST00000187830 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
PVR-201ENST00000187830 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
PVR-201ENST00000187830 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
PVR-201ENST00000187830 ANP32CO43423 234 aa20.22■□□□□ 0.83
PVR-201ENST00000187830 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
PVR-201ENST00000187830 SETD5Q9C0A6 1442 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms