RNA–Protein interactions for RNA: ENSMUST00000223060.1

Lpcat1-208, Transcript of Lysophosphatidylcholine acyltransferase 1, mousemouse

TSL 1 (best) BASIC

Gene Lpcat1, Length 2,141 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lpcat1-208ENSMUST00000223060 Gm35339A0A140LHH9 1649 aa26.48■■□□□ 1.83
Lpcat1-208ENSMUST00000223060 NischQ80TM9 1593 aa26.44■■□□□ 1.82
Lpcat1-208ENSMUST00000223060 Abcc9P70170 1546 aa25.75■■□□□ 1.71
Lpcat1-208ENSMUST00000223060 Abcc8B2RUS7 1588 aa25.36■■□□□ 1.65
Lpcat1-208ENSMUST00000223060 Rtl1Q7M732 1744 aa24.84■■□□□ 1.57
Lpcat1-208ENSMUST00000223060 Rpgrip1Q9EPQ2 1331 aa24.74■■□□□ 1.55
Lpcat1-208ENSMUST00000223060 Ccdc180J3QNE4 1664 aa24.56■■□□□ 1.52
Lpcat1-208ENSMUST00000223060 Rhox8Q6VSS7 320 aa24.47■■□□□ 1.51
Lpcat1-208ENSMUST00000223060 ScribQ80U72 1612 aa24.44■■□□□ 1.5
Lpcat1-208ENSMUST00000223060 Acin1Q9JIX8 1338 aaKnown RBP23.98■■□□□ 1.43
Lpcat1-208ENSMUST00000223060 Zcchc6Q5BLK4 1491 aaKnown RBP23.76■■□□□ 1.39
Lpcat1-208ENSMUST00000223060 NacadQ5SWP3 1504 aa23.71■■□□□ 1.39
Lpcat1-208ENSMUST00000223060 Dcaf1Q80TR8 1506 aa23.67■■□□□ 1.38
Lpcat1-208ENSMUST00000223060 Kdm5dQ62240 1548 aa23.65■■□□□ 1.38
Lpcat1-208ENSMUST00000223060 Pcgf6Q99NA9 353 aa23.44■■□□□ 1.34
Lpcat1-208ENSMUST00000223060 HrcG5E8J6 738 aa23.34■■□□□ 1.33
Lpcat1-208ENSMUST00000223060 Ehmt2Q9Z148 1263 aaKnown RBP23.3■■□□□ 1.32
Lpcat1-208ENSMUST00000223060 Sycp2Q9CUU3 1500 aa23.24■■□□□ 1.31
Lpcat1-208ENSMUST00000223060 Rb1cc1Q9ESK9 1588 aa23.17■■□□□ 1.3
Lpcat1-208ENSMUST00000223060 Baz1aO88379 1555 aa22.98■■□□□ 1.27
Lpcat1-208ENSMUST00000223060 Trim41Q5NCC3 630 aa22.92■■□□□ 1.26
Lpcat1-208ENSMUST00000223060 BicraF8VPZ9 1578 aa22.92■■□□□ 1.26
Lpcat1-208ENSMUST00000223060 Supt5hO55201 1082 aaKnown RBP22.79■■□□□ 1.24
Lpcat1-208ENSMUST00000223060 Crybg2B7ZCC2 1516 aa22.71■■□□□ 1.23
Lpcat1-208ENSMUST00000223060 Ccdc136Q3TVA9 1136 aa22.62■■□□□ 1.21
Lpcat1-208ENSMUST00000223060 Neurod1Q60867 357 aa22.57■■□□□ 1.2
Lpcat1-208ENSMUST00000223060 Dnajc5bQ9CQ94 199 aa22.48■■□□□ 1.19
Lpcat1-208ENSMUST00000223060 Smarca2Q6DIC0 1577 aa22.47■■□□□ 1.19
Lpcat1-208ENSMUST00000223060 Cep164Q5DU05 1446 aa22.38■■□□□ 1.17
Lpcat1-208ENSMUST00000223060 Las1lA2BE28 776 aaKnown RBP22.34■■□□□ 1.17
Lpcat1-208ENSMUST00000223060 Pds5bQ4VA53 1446 aaKnown RBP22.32■■□□□ 1.16
Lpcat1-208ENSMUST00000223060 NefmP08553 848 aa22.15■■□□□ 1.14
Lpcat1-208ENSMUST00000223060 Zeb1Q64318 1117 aa22.12■■□□□ 1.13
Lpcat1-208ENSMUST00000223060 Atad2bE9Q166 1460 aaKnown RBP22.09■■□□□ 1.13
Lpcat1-208ENSMUST00000223060 Thoc2B1AZI6 1594 aaKnown RBP22.07■■□□□ 1.12
Lpcat1-208ENSMUST00000223060 Cngb1E1AZ71 1325 aa22.03■■□□□ 1.12
Lpcat1-208ENSMUST00000223060 Anks4bQ8K3X6 423 aa22.01■■□□□ 1.11
Lpcat1-208ENSMUST00000223060 Brd4Q9ESU6 1400 aaKnown RBP22.01■■□□□ 1.11
Lpcat1-208ENSMUST00000223060 Sall2Q9QX96 1004 aa22■■□□□ 1.11
Lpcat1-208ENSMUST00000223060 1700123L14RikQ3V2K7 440 aa21.97■■□□□ 1.11
Lpcat1-208ENSMUST00000223060 Mier1Q5UAK0 511 aa21.92■■□□□ 1.1
Lpcat1-208ENSMUST00000223060 Smarca4Q3TKT4 1613 aaKnown RBP21.87■■□□□ 1.09
Lpcat1-208ENSMUST00000223060 Cecr2E9Q2Z1 1453 aa21.86■■□□□ 1.09
Lpcat1-208ENSMUST00000223060 Ercc6F8VPZ5 1481 aa21.83■■□□□ 1.09
Lpcat1-208ENSMUST00000223060 Csrnp3P59055 597 aa21.82■■□□□ 1.08
Lpcat1-208ENSMUST00000223060 Rsf1E9PWW9 1441 aaKnown RBP21.79■■□□□ 1.08
Lpcat1-208ENSMUST00000223060 Golga3P55937 1487 aa21.78■■□□□ 1.08
Lpcat1-208ENSMUST00000223060 Cc2d2aQ8CFW7 1633 aa21.76■■□□□ 1.07
Lpcat1-208ENSMUST00000223060 Iqgap2Q3UQ44 1575 aa21.76■■□□□ 1.07
Lpcat1-208ENSMUST00000223060 Chic1Q8CBW7 227 aa21.74■■□□□ 1.07
Lpcat1-208ENSMUST00000223060 Myt1Q8CFC2 1127 aa21.73■■□□□ 1.07
Lpcat1-208ENSMUST00000223060 Gab3Q8BSM5 595 aa21.69■■□□□ 1.06
Lpcat1-208ENSMUST00000223060 Aplp2Q06335 707 aa21.64■■□□□ 1.05
Lpcat1-208ENSMUST00000223060 CenpbP27790 599 aa21.62■■□□□ 1.05
Lpcat1-208ENSMUST00000223060 Synj1Q8CHC4 1574 aa21.62■■□□□ 1.05
Lpcat1-208ENSMUST00000223060 Frmpd1A2AKB4 1549 aa21.58■■□□□ 1.05
Lpcat1-208ENSMUST00000223060 Wdr62Q3U3T8 1523 aa21.57■■□□□ 1.04
Lpcat1-208ENSMUST00000223060 Fam135aQ6NS59 1506 aa21.57■■□□□ 1.04
Lpcat1-208ENSMUST00000223060 Ccdc88bQ4QRL3 1481 aa21.55■■□□□ 1.04
Lpcat1-208ENSMUST00000223060 CftrP26361 1476 aa21.54■■□□□ 1.04
Lpcat1-208ENSMUST00000223060 Cdk11bP24788 784 aaKnown RBP21.53■■□□□ 1.04
Lpcat1-208ENSMUST00000223060 Top2bQ64511 1612 aa21.5■■□□□ 1.03
Lpcat1-208ENSMUST00000223060 Phldb1Q6PDH0 1371 aaKnown RBP21.5■■□□□ 1.03
Lpcat1-208ENSMUST00000223060 Aebp2Q9Z248 504 aaKnown RBP21.5■■□□□ 1.03
Lpcat1-208ENSMUST00000223060 Cttnbp2B9EJA2 1648 aa21.47■■□□□ 1.03
Lpcat1-208ENSMUST00000223060 Nop58Q6DFW4 536 aaKnown RBP21.46■■□□□ 1.03
Lpcat1-208ENSMUST00000223060 Wdr66E9Q743 1299 aa21.46■■□□□ 1.03
Lpcat1-208ENSMUST00000223060 ClspnQ80YR7 1315 aa21.45■■□□□ 1.03
Lpcat1-208ENSMUST00000223060 Ubl4bQ9CQ84 188 aa21.38■■□□□ 1.01
Lpcat1-208ENSMUST00000223060 Esf1Q3V1V3 845 aaKnown RBP21.32■■□□□ 1
Lpcat1-208ENSMUST00000223060 Baz1bQ9Z277 1479 aa21.3■■□□□ 1
Lpcat1-208ENSMUST00000223060 UbtfP25976 765 aaKnown RBP21.25■□□□□ 0.99
Lpcat1-208ENSMUST00000223060 Fmn1Q05860 1466 aa21.21■□□□□ 0.99
Lpcat1-208ENSMUST00000223060 Unc13aQ4KUS2 1712 aa21.19■□□□□ 0.98
Lpcat1-208ENSMUST00000223060 Rapgef2Q8CHG7 1496 aa21.18■□□□□ 0.98
Lpcat1-208ENSMUST00000223060 Mrc2Q64449 1479 aa21.12■□□□□ 0.97
Lpcat1-208ENSMUST00000223060 Top2aQ01320 1528 aaKnown RBP21.12■□□□□ 0.97
Lpcat1-208ENSMUST00000223060 TonslQ6NZL6 1363 aa21.1■□□□□ 0.97
Lpcat1-208ENSMUST00000223060 Ppargc1bQ8VHJ7 1014 aa21.1■□□□□ 0.97
Lpcat1-208ENSMUST00000223060 Gm38655A0A286YDK6 273 aa21.1■□□□□ 0.97
Lpcat1-208ENSMUST00000223060 Cep162Q6ZQ06 1403 aa20.96■□□□□ 0.95
Lpcat1-208ENSMUST00000223060 DiexfQ8BTT6 772 aaKnown RBP20.92■□□□□ 0.94
Lpcat1-208ENSMUST00000223060 Tnnt3Q9QZ47 272 aa20.87■□□□□ 0.93
Lpcat1-208ENSMUST00000223060 Fam71e1A1L3C1 212 aa20.86■□□□□ 0.93
Lpcat1-208ENSMUST00000223060 Kif15Q6P9L6 1387 aa20.85■□□□□ 0.93
Lpcat1-208ENSMUST00000223060 Cux2P70298 1426 aa20.83■□□□□ 0.93
Lpcat1-208ENSMUST00000223060 Eif4g1Q6NZJ6 1600 aaKnown RBP20.8■□□□□ 0.92
Lpcat1-208ENSMUST00000223060 Ncapd3Q6ZQK0 1506 aa20.8■□□□□ 0.92
Lpcat1-208ENSMUST00000223060 Hnrnpul2Q00PI9 745 aaKnown RBP20.8■□□□□ 0.92
Lpcat1-208ENSMUST00000223060 TnnQ80Z71 1560 aa20.78■□□□□ 0.92
Lpcat1-208ENSMUST00000223060 Bcl11aQ9QYE3 773 aa20.78■□□□□ 0.92
Lpcat1-208ENSMUST00000223060 SafbD3YXK2 937 aaKnown RBP20.74■□□□□ 0.91
Lpcat1-208ENSMUST00000223060 Myt1lP97500 1187 aa20.71■□□□□ 0.91
Lpcat1-208ENSMUST00000223060 Lamc3Q9R0B6 1581 aa20.68■□□□□ 0.9
Lpcat1-208ENSMUST00000223060 Npm1Q61937 292 aaKnown RBP20.68■□□□□ 0.9
Lpcat1-208ENSMUST00000223060 Mapk8ip2Q9ERE9 830 aa20.68■□□□□ 0.9
Lpcat1-208ENSMUST00000223060 Npm2Q80W85 207 aa20.67■□□□□ 0.9
Lpcat1-208ENSMUST00000223060 Clip1Q922J3 1391 aa20.66■□□□□ 0.9
Lpcat1-208ENSMUST00000223060 Lrriq1Q0P5X1 1673 aa20.62■□□□□ 0.89
Lpcat1-208ENSMUST00000223060 Plekhg3Q4VAC9 1341 aa20.62■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms