RNA–Protein interactions for RNA: ENSMUST00000211887.1

Cnot1-203, Transcript of CCR4-NOT transcription complex subunit 1, mousemouse

TSL 1 (best) BASIC

Gene Cnot1, Length 8,364 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot1-203ENSMUST00000211887 Cngb1E1AZ71 1325 aa10.73□□□□□ -0.69
Cnot1-203ENSMUST00000211887 Rpgrip1Q9EPQ2 1331 aa10.72□□□□□ -0.69
Cnot1-203ENSMUST00000211887 Pelp1Q9DBD5 1123 aaKnown RBP10.57□□□□□ -0.72
Cnot1-203ENSMUST00000211887 Las1lA2BE28 776 aaKnown RBP10.53□□□□□ -0.72
Cnot1-203ENSMUST00000211887 Wdr66E9Q743 1299 aa10.22□□□□□ -0.77
Cnot1-203ENSMUST00000211887 Myt1Q8CFC2 1127 aa10.04□□□□□ -0.8
Cnot1-203ENSMUST00000211887 4930567H17RikQ3V0K5 233 aa9.98□□□□□ -0.81
Cnot1-203ENSMUST00000211887 Rhox8Q6VSS7 320 aa9.96□□□□□ -0.81
Cnot1-203ENSMUST00000211887 Rtl1Q7M732 1744 aa9.89□□□□□ -0.83
Cnot1-203ENSMUST00000211887 Amer1Q7TS75 1132 aa9.73□□□□□ -0.85
Cnot1-203ENSMUST00000211887 Stra8P70278 393 aa9.72□□□□□ -0.85
Cnot1-203ENSMUST00000211887 CenpbP27790 599 aa9.69□□□□□ -0.86
Cnot1-203ENSMUST00000211887 Rtl5Q5DTT4 599 aa9.51□□□□□ -0.89
Cnot1-203ENSMUST00000211887 Ccdc180J3QNE4 1664 aa9.42□□□□□ -0.9
Cnot1-203ENSMUST00000211887 Zeb1Q64318 1117 aa9.34□□□□□ -0.92
Cnot1-203ENSMUST00000211887 Tnnt3Q9QZ47 272 aa9.3□□□□□ -0.92
Cnot1-203ENSMUST00000211887 NefmP08553 848 aa9.28□□□□□ -0.92
Cnot1-203ENSMUST00000211887 Ythdc1E9Q5K9 736 aaKnown RBP9.21□□□□□ -0.94
Cnot1-203ENSMUST00000211887 4933416C03RikQ3V063 378 aa9.16□□□□□ -0.94
Cnot1-203ENSMUST00000211887 NeflP08551 543 aa9.16□□□□□ -0.94
Cnot1-203ENSMUST00000211887 Anp32bQ9EST5 272 aaKnown RBP9.14□□□□□ -0.95
Cnot1-203ENSMUST00000211887 Ube2uB1AUC4 352 aa9.14□□□□□ -0.95
Cnot1-203ENSMUST00000211887 DiexfQ8BTT6 772 aaKnown RBP9.11□□□□□ -0.95
Cnot1-203ENSMUST00000211887 Ccdc9Q8VC31 543 aaKnown RBP9.07□□□□□ -0.96
Cnot1-203ENSMUST00000211887 Neurod1Q60867 357 aa9.04□□□□□ -0.96
Cnot1-203ENSMUST00000211887 Acin1Q9JIX8 1338 aaKnown RBP9.03□□□□□ -0.96
Cnot1-203ENSMUST00000211887 Myt1lP97500 1187 aa9.03□□□□□ -0.96
Cnot1-203ENSMUST00000211887 Cdk11bP24788 784 aaKnown RBP8.99□□□□□ -0.97
Cnot1-203ENSMUST00000211887 Trim41Q5NCC3 630 aa8.97□□□□□ -0.97
Cnot1-203ENSMUST00000211887 NrdcQ8BHG1 1161 aa8.93□□□□□ -0.98
Cnot1-203ENSMUST00000211887 HrcG5E8J6 738 aa8.91□□□□□ -0.98
Cnot1-203ENSMUST00000211887 Ttbk1Q6PCN3 1308 aa8.91□□□□□ -0.98
Cnot1-203ENSMUST00000211887 Esf1Q3V1V3 845 aaKnown RBP8.86□□□□□ -0.99
Cnot1-203ENSMUST00000211887 Npm2Q80W85 207 aa8.81□□□□□ -1
Cnot1-203ENSMUST00000211887 Eif5bQ05D44 1216 aaKnown RBP8.78□□□□□ -1
Cnot1-203ENSMUST00000211887 Ehmt2Q9Z148 1263 aaKnown RBP8.77□□□□□ -1.01
Cnot1-203ENSMUST00000211887 Supt5hO55201 1082 aaKnown RBP8.76□□□□□ -1.01
Cnot1-203ENSMUST00000211887 Anp32aO35381 247 aa8.76□□□□□ -1.01
Cnot1-203ENSMUST00000211887 Nop58Q6DFW4 536 aaKnown RBP8.76□□□□□ -1.01
Cnot1-203ENSMUST00000211887 CatipB9EKE5 520 aa8.74□□□□□ -1.01
Cnot1-203ENSMUST00000211887 Hdac5Q9Z2V6 1113 aa8.72□□□□□ -1.01
Cnot1-203ENSMUST00000211887 DaxxO35613 739 aa8.69□□□□□ -1.02
Cnot1-203ENSMUST00000211887 Adam1bQ8R534 806 aa8.68□□□□□ -1.02
Cnot1-203ENSMUST00000211887 Pcgf6Q99NA9 353 aa8.67□□□□□ -1.02
Cnot1-203ENSMUST00000211887 Upf2A2AT37 1269 aaKnown RBP8.65□□□□□ -1.02
Cnot1-203ENSMUST00000211887 Slc24a1Q91WD8 1130 aa8.63□□□□□ -1.03
Cnot1-203ENSMUST00000211887 Polr3glQ8R0C0 218 aa8.61□□□□□ -1.03
Cnot1-203ENSMUST00000211887 NclP09405 707 aaKnown RBP8.58□□□□□ -1.04
Cnot1-203ENSMUST00000211887 Trim44Q9QXA7 346 aa8.55□□□□□ -1.04
Cnot1-203ENSMUST00000211887 Ccdc136Q3TVA9 1136 aa8.55□□□□□ -1.04
Cnot1-203ENSMUST00000211887 Hsp90aa1P07901 733 aaKnown RBP8.53□□□□□ -1.04
Cnot1-203ENSMUST00000211887 TonslQ6NZL6 1363 aa8.51□□□□□ -1.05
Cnot1-203ENSMUST00000211887 UbtfP25976 765 aaKnown RBP8.5□□□□□ -1.05
Cnot1-203ENSMUST00000211887 Aplp2Q06335 707 aa8.5□□□□□ -1.05
Cnot1-203ENSMUST00000211887 ClspnQ80YR7 1315 aa8.48□□□□□ -1.05
Cnot1-203ENSMUST00000211887 Gab3Q8BSM5 595 aa8.46□□□□□ -1.05
Cnot1-203ENSMUST00000211887 Htatsf1Q8BGC0 757 aa8.46□□□□□ -1.06
Cnot1-203ENSMUST00000211887 Calcoco2A2A6M5 331 aa8.46□□□□□ -1.06
Cnot1-203ENSMUST00000211887 NischQ80TM9 1593 aa8.44□□□□□ -1.06
Cnot1-203ENSMUST00000211887 Tnnt2P50752 301 aa8.43□□□□□ -1.06
Cnot1-203ENSMUST00000211887 Os9Q8K2C7 672 aa8.41□□□□□ -1.06
Cnot1-203ENSMUST00000211887 Anks4bQ8K3X6 423 aa8.4□□□□□ -1.06
Cnot1-203ENSMUST00000211887 Map7d2A2AG50 781 aa8.4□□□□□ -1.07
Cnot1-203ENSMUST00000211887 SetQ9EQU5 289 aaKnown RBP8.39□□□□□ -1.07
Cnot1-203ENSMUST00000211887 4933402E13RikQ9D4D2 429 aa8.36□□□□□ -1.07
Cnot1-203ENSMUST00000211887 PtmsQ9D0J8 101 aaKnown RBP8.36□□□□□ -1.07
Cnot1-203ENSMUST00000211887 Bcl11aQ9QYE3 773 aa8.36□□□□□ -1.07
Cnot1-203ENSMUST00000211887 Ccer2J3QPU5 274 aa8.35□□□□□ -1.07
Cnot1-203ENSMUST00000211887 Rangap1P46061 589 aaKnown RBP8.35□□□□□ -1.07
Cnot1-203ENSMUST00000211887 Ccdc27Q3V036 639 aa8.34□□□□□ -1.07
Cnot1-203ENSMUST00000211887 Gm973E9Q295 1059 aa8.33□□□□□ -1.08
Cnot1-203ENSMUST00000211887 AU015836B2RUM3 263 aa8.32□□□□□ -1.08
Cnot1-203ENSMUST00000211887 Lmod3E9QA62 571 aa8.31□□□□□ -1.08
Cnot1-203ENSMUST00000211887 Chmp4bQ9D8B3 224 aaKnown RBP8.3□□□□□ -1.08
Cnot1-203ENSMUST00000211887 Fam50aQ9WV03 339 aaKnown RBP8.29□□□□□ -1.08
Cnot1-203ENSMUST00000211887 Calr4Q3TQS0 420 aa8.28□□□□□ -1.08
Cnot1-203ENSMUST00000211887 Nlrp6Q91WS2 869 aa8.27□□□□□ -1.09
Cnot1-203ENSMUST00000211887 Dusp9Q7TNL7 452 aa8.27□□□□□ -1.09
Cnot1-203ENSMUST00000211887 CalrP14211 416 aaKnown RBP8.27□□□□□ -1.09
Cnot1-203ENSMUST00000211887 Zfp777B9EKF4 885 aa8.26□□□□□ -1.09
Cnot1-203ENSMUST00000211887 Ppm1gQ61074 542 aa8.25□□□□□ -1.09
Cnot1-203ENSMUST00000211887 Wdr43Q6ZQL4 677 aaKnown RBP8.24□□□□□ -1.09
Cnot1-203ENSMUST00000211887 Mak16Q8BGS0 296 aaKnown RBP8.24□□□□□ -1.09
Cnot1-203ENSMUST00000211887 Irx3P81067 507 aa8.23□□□□□ -1.09
Cnot1-203ENSMUST00000211887 PnnO35691 725 aaKnown RBP8.22□□□□□ -1.09
Cnot1-203ENSMUST00000211887 Znf326O88291 580 aa8.22□□□□□ -1.09
Cnot1-203ENSMUST00000211887 PtmaP26350 111 aa8.21□□□□□ -1.09
Cnot1-203ENSMUST00000211887 DekQ7TNV0 380 aaKnown RBP8.21□□□□□ -1.1
Cnot1-203ENSMUST00000211887 MsnP26041 577 aaKnown RBP8.2□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Mbd3Q9Z2D8 285 aaKnown RBP8.19□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Map7O88735 730 aa8.18□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Hsp90b1P08113 802 aaKnown RBP8.18□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Pde3bQ61409 1100 aa8.17□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Dcaf1Q80TR8 1506 aa8.17□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Cald1E9QA15 768 aaKnown RBP8.16□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Casc1Q6TDU8 730 aa8.16□□□□□ -1.1
Cnot1-203ENSMUST00000211887 RdxP26043 583 aaKnown RBP8.15□□□□□ -1.1
Cnot1-203ENSMUST00000211887 Wwc2Q6NXJ0 1187 aa8.14□□□□□ -1.11
Cnot1-203ENSMUST00000211887 Rrp12Q6P5B0 1295 aaKnown RBP8.14□□□□□ -1.11
Cnot1-203ENSMUST00000211887 Ddrgk1Q80WW9 315 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms