RNA–Protein interactions for RNA: ENSMUST00000199534.4

Ldb2-207, Transcript of LIM domain-binding protein 2, mousemouse

TSL 1 (best) BASIC

Gene Ldb2, Length 2,541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2-207ENSMUST00000199534 NischQ80TM9 1593 aa16.94■□□□□ 0.3
Ldb2-207ENSMUST00000199534 Gm35339A0A140LHH9 1649 aa16.61■□□□□ 0.25
Ldb2-207ENSMUST00000199534 Abcc9P70170 1546 aa16.45■□□□□ 0.22
Ldb2-207ENSMUST00000199534 Abcc8B2RUS7 1588 aa16.08■□□□□ 0.16
Ldb2-207ENSMUST00000199534 Rhox8Q6VSS7 320 aa15.78■□□□□ 0.12
Ldb2-207ENSMUST00000199534 Rtl1Q7M732 1744 aa15.51■□□□□ 0.07
Ldb2-207ENSMUST00000199534 Ccdc180J3QNE4 1664 aa15.26■□□□□ 0.03
Ldb2-207ENSMUST00000199534 Zcchc6Q5BLK4 1491 aaKnown RBP14.99□□□□□ -0.01
Ldb2-207ENSMUST00000199534 ScribQ80U72 1612 aa14.98□□□□□ -0.01
Ldb2-207ENSMUST00000199534 Dcaf1Q80TR8 1506 aa14.97□□□□□ -0.01
Ldb2-207ENSMUST00000199534 Rb1cc1Q9ESK9 1588 aa14.85□□□□□ -0.03
Ldb2-207ENSMUST00000199534 Kdm5dQ62240 1548 aa14.71□□□□□ -0.05
Ldb2-207ENSMUST00000199534 Baz1aO88379 1555 aa14.67□□□□□ -0.06
Ldb2-207ENSMUST00000199534 Ccdc136Q3TVA9 1136 aa14.64□□□□□ -0.07
Ldb2-207ENSMUST00000199534 NacadQ5SWP3 1504 aa14.56□□□□□ -0.08
Ldb2-207ENSMUST00000199534 HrcG5E8J6 738 aa14.54□□□□□ -0.08
Ldb2-207ENSMUST00000199534 Rpgrip1Q9EPQ2 1331 aa14.42□□□□□ -0.1
Ldb2-207ENSMUST00000199534 Crybg2B7ZCC2 1516 aa14.36□□□□□ -0.11
Ldb2-207ENSMUST00000199534 Smarca2Q6DIC0 1577 aa14.34□□□□□ -0.11
Ldb2-207ENSMUST00000199534 Trim41Q5NCC3 630 aa14.3□□□□□ -0.12
Ldb2-207ENSMUST00000199534 Ehmt2Q9Z148 1263 aaKnown RBP14.3□□□□□ -0.12
Ldb2-207ENSMUST00000199534 Acin1Q9JIX8 1338 aaKnown RBP14.27□□□□□ -0.12
Ldb2-207ENSMUST00000199534 Sycp2Q9CUU3 1500 aa14.26□□□□□ -0.13
Ldb2-207ENSMUST00000199534 Cep164Q5DU05 1446 aa14.11□□□□□ -0.15
Ldb2-207ENSMUST00000199534 Cecr2E9Q2Z1 1453 aa14.02□□□□□ -0.16
Ldb2-207ENSMUST00000199534 Cngb1E1AZ71 1325 aa13.99□□□□□ -0.17
Ldb2-207ENSMUST00000199534 Brd4Q9ESU6 1400 aaKnown RBP13.99□□□□□ -0.17
Ldb2-207ENSMUST00000199534 Chic1Q8CBW7 227 aa13.95□□□□□ -0.18
Ldb2-207ENSMUST00000199534 Rsf1E9PWW9 1441 aaKnown RBP13.95□□□□□ -0.18
Ldb2-207ENSMUST00000199534 BicraF8VPZ9 1578 aa13.95□□□□□ -0.18
Ldb2-207ENSMUST00000199534 Synj1Q8CHC4 1574 aa13.91□□□□□ -0.18
Ldb2-207ENSMUST00000199534 Golga3P55937 1487 aa13.88□□□□□ -0.19
Ldb2-207ENSMUST00000199534 Gab3Q8BSM5 595 aa13.86□□□□□ -0.19
Ldb2-207ENSMUST00000199534 Ccdc88bQ4QRL3 1481 aa13.85□□□□□ -0.19
Ldb2-207ENSMUST00000199534 CftrP26361 1476 aa13.79□□□□□ -0.2
Ldb2-207ENSMUST00000199534 Esf1Q3V1V3 845 aaKnown RBP13.76□□□□□ -0.21
Ldb2-207ENSMUST00000199534 Top2bQ64511 1612 aa13.72□□□□□ -0.21
Ldb2-207ENSMUST00000199534 Cttnbp2B9EJA2 1648 aa13.71□□□□□ -0.21
Ldb2-207ENSMUST00000199534 Pcgf6Q99NA9 353 aa13.69□□□□□ -0.22
Ldb2-207ENSMUST00000199534 Smarca4Q3TKT4 1613 aaKnown RBP13.65□□□□□ -0.22
Ldb2-207ENSMUST00000199534 Cc2d2aQ8CFW7 1633 aa13.61□□□□□ -0.23
Ldb2-207ENSMUST00000199534 Mier1Q5UAK0 511 aa13.51□□□□□ -0.25
Ldb2-207ENSMUST00000199534 Supt5hO55201 1082 aaKnown RBP13.51□□□□□ -0.25
Ldb2-207ENSMUST00000199534 Fmn1Q05860 1466 aa13.49□□□□□ -0.25
Ldb2-207ENSMUST00000199534 Rapgef2Q8CHG7 1496 aa13.47□□□□□ -0.25
Ldb2-207ENSMUST00000199534 Iqgap2Q3UQ44 1575 aa13.47□□□□□ -0.25
Ldb2-207ENSMUST00000199534 Top2aQ01320 1528 aaKnown RBP13.45□□□□□ -0.26
Ldb2-207ENSMUST00000199534 NefmP08553 848 aa13.43□□□□□ -0.26
Ldb2-207ENSMUST00000199534 Pds5bQ4VA53 1446 aaKnown RBP13.4□□□□□ -0.26
Ldb2-207ENSMUST00000199534 Zeb1Q64318 1117 aa13.39□□□□□ -0.27
Ldb2-207ENSMUST00000199534 Atad2bE9Q166 1460 aaKnown RBP13.37□□□□□ -0.27
Ldb2-207ENSMUST00000199534 Cep162Q6ZQ06 1403 aa13.36□□□□□ -0.27
Ldb2-207ENSMUST00000199534 Myt1lP97500 1187 aa13.34□□□□□ -0.27
Ldb2-207ENSMUST00000199534 UbtfP25976 765 aaKnown RBP13.34□□□□□ -0.27
Ldb2-207ENSMUST00000199534 Npm2Q80W85 207 aa13.29□□□□□ -0.28
Ldb2-207ENSMUST00000199534 TnnQ80Z71 1560 aa13.25□□□□□ -0.29
Ldb2-207ENSMUST00000199534 Eif4g1Q6NZJ6 1600 aaKnown RBP13.24□□□□□ -0.29
Ldb2-207ENSMUST00000199534 Frmpd1A2AKB4 1549 aa13.21□□□□□ -0.3
Ldb2-207ENSMUST00000199534 Sall2Q9QX96 1004 aa13.19□□□□□ -0.3
Ldb2-207ENSMUST00000199534 Clip1Q922J3 1391 aa13.19□□□□□ -0.3
Ldb2-207ENSMUST00000199534 Wdr62Q3U3T8 1523 aa13.18□□□□□ -0.3
Ldb2-207ENSMUST00000199534 Thoc2B1AZI6 1594 aaKnown RBP13.16□□□□□ -0.3
Ldb2-207ENSMUST00000199534 Plekhg3Q4VAC9 1341 aa13.15□□□□□ -0.3
Ldb2-207ENSMUST00000199534 PtprkP35822 1457 aa13.13□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Arhgap35Q91YM2 1499 aa13.13□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Lamc3Q9R0B6 1581 aa13.13□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Neurod1Q60867 357 aa13.11□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Il27Q8K3I6 234 aa13.11□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Ercc6F8VPZ5 1481 aa13.11□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Kif15Q6P9L6 1387 aa13.1□□□□□ -0.31
Ldb2-207ENSMUST00000199534 NrkQ9R0G8 1455 aa13.09□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Las1lA2BE28 776 aaKnown RBP13.09□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Unc13aQ4KUS2 1712 aa13.09□□□□□ -0.31
Ldb2-207ENSMUST00000199534 Aebp2Q9Z248 504 aaKnown RBP13.06□□□□□ -0.32
Ldb2-207ENSMUST00000199534 Ncapd3Q6ZQK0 1506 aa13.05□□□□□ -0.32
Ldb2-207ENSMUST00000199534 Wdr66E9Q743 1299 aa13.04□□□□□ -0.32
Ldb2-207ENSMUST00000199534 Camsap1A2AHC3 1581 aa13.04□□□□□ -0.32
Ldb2-207ENSMUST00000199534 Shroom4Q1W617 1475 aa13.04□□□□□ -0.32
Ldb2-207ENSMUST00000199534 Arap1Q4LDD4 1452 aa13.03□□□□□ -0.32
Ldb2-207ENSMUST00000199534 Eea1Q8BL66 1411 aa13.02□□□□□ -0.33
Ldb2-207ENSMUST00000199534 Ap3b1Q9Z1T1 1105 aa13.01□□□□□ -0.33
Ldb2-207ENSMUST00000199534 Baz1bQ9Z277 1479 aa13□□□□□ -0.33
Ldb2-207ENSMUST00000199534 TonslQ6NZL6 1363 aa12.98□□□□□ -0.33
Ldb2-207ENSMUST00000199534 Setd5Q5XJV7 1441 aa12.98□□□□□ -0.33
Ldb2-207ENSMUST00000199534 Map3k1P53349 1493 aa12.97□□□□□ -0.33
Ldb2-207ENSMUST00000199534 Arhgef5E9Q7D5 1581 aa12.97□□□□□ -0.33
Ldb2-207ENSMUST00000199534 Grin2bQ01097 1482 aa12.96□□□□□ -0.33
Ldb2-207ENSMUST00000199534 Ccdc18Q640L5 1455 aa12.95□□□□□ -0.34
Ldb2-207ENSMUST00000199534 Fam135aQ6NS59 1506 aa12.94□□□□□ -0.34
Ldb2-207ENSMUST00000199534 ClspnQ80YR7 1315 aa12.94□□□□□ -0.34
Ldb2-207ENSMUST00000199534 Mroh2bQ7M6Y6 1581 aa12.92□□□□□ -0.34
Ldb2-207ENSMUST00000199534 Ppargc1bQ8VHJ7 1014 aa12.92□□□□□ -0.34
Ldb2-207ENSMUST00000199534 Tiam1Q60610 1591 aa12.88□□□□□ -0.35
Ldb2-207ENSMUST00000199534 Phldb1Q6PDH0 1371 aaKnown RBP12.88□□□□□ -0.35
Ldb2-207ENSMUST00000199534 Ankrd26Q811D2 1581 aa12.87□□□□□ -0.35
Ldb2-207ENSMUST00000199534 Erich3F6QRE9 1637 aa12.86□□□□□ -0.35
Ldb2-207ENSMUST00000199534 Kdm5bQ80Y84 1544 aa12.86□□□□□ -0.35
Ldb2-207ENSMUST00000199534 Cux2P70298 1426 aa12.86□□□□□ -0.35
Ldb2-207ENSMUST00000199534 AqrQ8CFQ3 1481 aaKnown RBP12.85□□□□□ -0.35
Ldb2-207ENSMUST00000199534 Naip1Q9QWK5 1403 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms