RNA–Protein interactions for RNA: ENSMUST00000191514.6

Gm28840-208, mousemouse

TSL 1 (best) BASIC

Gene Gm28840, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28840-208ENSMUST00000191514 Chic1Q8CBW7 227 aa44.85■■■■■ 4.77
Gm28840-208ENSMUST00000191514 Mapk8ip2Q9ERE9 830 aa43.89■■■■■ 4.62
Gm28840-208ENSMUST00000191514 Phf23Q8BSN5 401 aa40.32■■■■■ 4.05
Gm28840-208ENSMUST00000191514 Plppr3Q7TPB0 716 aa38.71■■■■□ 3.79
Gm28840-208ENSMUST00000191514 Gab3Q8BSM5 595 aa38.52■■■■□ 3.76
Gm28840-208ENSMUST00000191514 Senp3Q9EP97 568 aaKnown RBP36.89■■■■□ 3.5
Gm28840-208ENSMUST00000191514 Kcna4Q61423 654 aa35.22■■■■□ 3.23
Gm28840-208ENSMUST00000191514 Hoxd11P23813 323 aa32.6■■■□□ 2.81
Gm28840-208ENSMUST00000191514 Fam163aQ8CAA5 168 aa32.59■■■□□ 2.81
Gm28840-208ENSMUST00000191514 Trap1aP19473 224 aa32.5■■■□□ 2.79
Gm28840-208ENSMUST00000191514 Dmrt2Q8BG36 561 aa31.46■■■□□ 2.63
Gm28840-208ENSMUST00000191514 Znf219Q6IQX8 726 aa31.33■■■□□ 2.61
Gm28840-208ENSMUST00000191514 Chrna2Q91X60 512 aa30.82■■■□□ 2.52
Gm28840-208ENSMUST00000191514 Ppargc1bQ8VHJ7 1014 aa30.69■■■□□ 2.5
Gm28840-208ENSMUST00000191514 Rsph4aQ8BYM7 716 aa30.57■■■□□ 2.48
Gm28840-208ENSMUST00000191514 Rimbp2Q80U40 1072 aa30.21■■■□□ 2.43
Gm28840-208ENSMUST00000191514 ArsiQ32KI9 573 aa30.05■■■□□ 2.4
Gm28840-208ENSMUST00000191514 Slc4a1apE9PX68 744 aa30.01■■■□□ 2.39
Gm28840-208ENSMUST00000191514 Dnajc5bQ9CQ94 199 aa30.01■■■□□ 2.39
Gm28840-208ENSMUST00000191514 Atf5O70191 283 aa29.97■■■□□ 2.39
Gm28840-208ENSMUST00000191514 Akt1s1Q9D1F4 257 aa29.64■■■□□ 2.34
Gm28840-208ENSMUST00000191514 Hs6st3Q9QYK4 470 aa29.61■■■□□ 2.33
Gm28840-208ENSMUST00000191514 Ppp4r2Q0VGB7 417 aa29.59■■■□□ 2.33
Gm28840-208ENSMUST00000191514 Slc34a2Q9DBP0 697 aa29.04■■■□□ 2.24
Gm28840-208ENSMUST00000191514 1700123L14RikQ3V2K7 440 aa28.75■■■□□ 2.19
Gm28840-208ENSMUST00000191514 Bach1P97302 739 aa28.63■■■□□ 2.17
Gm28840-208ENSMUST00000191514 Sox12Q04890 314 aa28.37■■■□□ 2.13
Gm28840-208ENSMUST00000191514 WdpcpQ8C456 722 aa27.83■■■□□ 2.05
Gm28840-208ENSMUST00000191514 C1qtnf12Q8R2Z0 308 aa27.41■■□□□ 1.98
Gm28840-208ENSMUST00000191514 Fam71e1A1L3C1 212 aa27.37■■□□□ 1.97
Gm28840-208ENSMUST00000191514 Cdca7Q9D0M2 382 aa27.34■■□□□ 1.97
Gm28840-208ENSMUST00000191514 Nlrp6Q91WS2 869 aa27.23■■□□□ 1.95
Gm28840-208ENSMUST00000191514 Znf704Q9ERQ3 566 aa27.01■■□□□ 1.91
Gm28840-208ENSMUST00000191514 Egfem1Q8C088 590 aa26.96■■□□□ 1.91
Gm28840-208ENSMUST00000191514 Ifnlr1Q8CGK5 535 aa26.96■■□□□ 1.91
Gm28840-208ENSMUST00000191514 G430095P16RikE9Q913 147 aa26.93■■□□□ 1.9
Gm28840-208ENSMUST00000191514 Zbtb7aO88939 569 aaKnown RBP26.92■■□□□ 1.9
Gm28840-208ENSMUST00000191514 Slc4a5E9Q3M5 1116 aa26.9■■□□□ 1.9
Gm28840-208ENSMUST00000191514 Grwd1Q810D6 446 aaKnown RBP26.81■■□□□ 1.88
Gm28840-208ENSMUST00000191514 Riok3Q9DBU3 519 aaKnown RBP26.71■■□□□ 1.87
Gm28840-208ENSMUST00000191514 Ms4a5Q810P8 197 aa26.66■■□□□ 1.86
Gm28840-208ENSMUST00000191514 AcrbpQ3V140 540 aa26.65■■□□□ 1.86
Gm28840-208ENSMUST00000191514 Pde4cQ3UEI1 686 aa26.61■■□□□ 1.85
Gm28840-208ENSMUST00000191514 Npm2Q80W85 207 aa26.54■■□□□ 1.84
Gm28840-208ENSMUST00000191514 Ube2uB1AUC4 352 aa26.53■■□□□ 1.84
Gm28840-208ENSMUST00000191514 Trim41Q5NCC3 630 aa26.46■■□□□ 1.83
Gm28840-208ENSMUST00000191514 Zbtb12Q9Z150 459 aa26.42■■□□□ 1.82
Gm28840-208ENSMUST00000191514 MyclP10166 368 aa26.41■■□□□ 1.82
Gm28840-208ENSMUST00000191514 Rnf216P58283 853 aa26.38■■□□□ 1.81
Gm28840-208ENSMUST00000191514 Abcb7Q61102 752 aaKnown RBP26.38■■□□□ 1.81
Gm28840-208ENSMUST00000191514 GapdhsQ64467 440 aa26.32■■□□□ 1.8
Gm28840-208ENSMUST00000191514 Gtpbp6Q3U6U5 514 aa26.17■■□□□ 1.78
Gm28840-208ENSMUST00000191514 Prm3Q62100 101 aa26.15■■□□□ 1.78
Gm28840-208ENSMUST00000191514 Nkx1-1G3UXB3 402 aa25.94■■□□□ 1.74
Gm28840-208ENSMUST00000191514 Rtn4Q99P72 1162 aaKnown RBP25.91■■□□□ 1.74
Gm28840-208ENSMUST00000191514 Styxl1Q9DAR2 321 aa25.86■■□□□ 1.73
Gm28840-208ENSMUST00000191514 Tshz2Q68FE9 1030 aa25.75■■□□□ 1.71
Gm28840-208ENSMUST00000191514 Fbln2P37889 1221 aa25.63■■□□□ 1.69
Gm28840-208ENSMUST00000191514 Npm3Q9CPP0 175 aaKnown RBP25.45■■□□□ 1.66
Gm28840-208ENSMUST00000191514 MpndQ3TV65 487 aa25.35■■□□□ 1.65
Gm28840-208ENSMUST00000191514 Znf703P0CL69 594 aa25.13■■□□□ 1.61
Gm28840-208ENSMUST00000191514 Ildr2B5TVM2 661 aa25.12■■□□□ 1.61
Gm28840-208ENSMUST00000191514 Kcnn1Q9EQR3 537 aa25.09■■□□□ 1.61
Gm28840-208ENSMUST00000191514 Skida1Q80YR3 822 aa25.07■■□□□ 1.6
Gm28840-208ENSMUST00000191514 Prr29B1ARI9 187 aa24.96■■□□□ 1.59
Gm28840-208ENSMUST00000191514 Pitpnm1O35954 1243 aa24.92■■□□□ 1.58
Gm28840-208ENSMUST00000191514 Tcf3P15806 651 aa24.83■■□□□ 1.57
Gm28840-208ENSMUST00000191514 Cacnb1Q8R3Z5 597 aa24.8■■□□□ 1.56
Gm28840-208ENSMUST00000191514 Ppp1r37Q8BKR5 712 aa24.76■■□□□ 1.55
Gm28840-208ENSMUST00000191514 Trim35Q8C006 501 aa24.74■■□□□ 1.55
Gm28840-208ENSMUST00000191514 Pip4p2Q9CZX7 257 aa24.66■■□□□ 1.54
Gm28840-208ENSMUST00000191514 Kank3Q9Z1P7 791 aa24.66■■□□□ 1.54
Gm28840-208ENSMUST00000191514 Clcn6O35454 870 aa24.55■■□□□ 1.52
Gm28840-208ENSMUST00000191514 Lrrc43Q3V0L5 667 aa24.51■■□□□ 1.51
Gm28840-208ENSMUST00000191514 Ehmt2Q9Z148 1263 aaKnown RBP24.5■■□□□ 1.51
Gm28840-208ENSMUST00000191514 Jarid2Q62315 1234 aa24.4■■□□□ 1.5
Gm28840-208ENSMUST00000191514 Cadps2Q8BYR5 1297 aa24.37■■□□□ 1.49
Gm28840-208ENSMUST00000191514 Ecm2Q5FW85 670 aa24.26■■□□□ 1.47
Gm28840-208ENSMUST00000191514 Nyap1Q6PFX7 833 aa24.25■■□□□ 1.47
Gm28840-208ENSMUST00000191514 Sra1Q80VJ2 232 aa23.9■■□□□ 1.42
Gm28840-208ENSMUST00000191514 Hnrnpul2Q00PI9 745 aaKnown RBP23.87■■□□□ 1.41
Gm28840-208ENSMUST00000191514 SnphQ80U23 495 aa23.83■■□□□ 1.41
Gm28840-208ENSMUST00000191514 MycnP03966 462 aaKnown RBP23.71■■□□□ 1.39
Gm28840-208ENSMUST00000191514 Dok7Q18PE0 504 aa23.71■■□□□ 1.39
Gm28840-208ENSMUST00000191514 Prdm10Q3UTQ7 1184 aa23.61■■□□□ 1.37
Gm28840-208ENSMUST00000191514 Pde4dQ01063 747 aa23.48■■□□□ 1.35
Gm28840-208ENSMUST00000191514 Repin1Q5U4E2 545 aa23.48■■□□□ 1.35
Gm28840-208ENSMUST00000191514 Hdac5Q9Z2V6 1113 aa23.47■■□□□ 1.35
Gm28840-208ENSMUST00000191514 Fam117bQ3U3E2 584 aa23.42■■□□□ 1.34
Gm28840-208ENSMUST00000191514 Spock2Q9ER58 423 aa23.39■■□□□ 1.33
Gm28840-208ENSMUST00000191514 Zbtb7bQ64321 544 aa23.32■■□□□ 1.32
Gm28840-208ENSMUST00000191514 Ppp6r1Q7TSI3 856 aa23.32■■□□□ 1.32
Gm28840-208ENSMUST00000191514 PygbQ8CI94 843 aaKnown RBP23.28■■□□□ 1.32
Gm28840-208ENSMUST00000191514 CrebzfQ91ZR3 358 aa23.28■■□□□ 1.32
Gm28840-208ENSMUST00000191514 Foxp4Q9DBY0 795 aaKnown RBP23.24■■□□□ 1.31
Gm28840-208ENSMUST00000191514 Atad2Q8CDM1 1040 aa23.17■■□□□ 1.3
Gm28840-208ENSMUST00000191514 Pdap1Q3UHX2 181 aaKnown RBP23.14■■□□□ 1.29
Gm28840-208ENSMUST00000191514 Gm13697A2AK42 830 aa23.12■■□□□ 1.29
Gm28840-208ENSMUST00000191514 Ferd3lQ923Z4 168 aa23.03■■□□□ 1.28
Gm28840-208ENSMUST00000191514 ArntlQ9WTL8 632 aa23.02■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms