RNA–Protein interactions for RNA: ENSMUST00000190424.6

Gm28074-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28074, Length 1,497 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28074-201ENSMUST00000190424 Chic1Q8CBW7 227 aa22.87■■□□□ 1.25
Gm28074-201ENSMUST00000190424 Mapk8ip2Q9ERE9 830 aa22.35■■□□□ 1.17
Gm28074-201ENSMUST00000190424 Phf23Q8BSN5 401 aa20.57■□□□□ 0.88
Gm28074-201ENSMUST00000190424 Plppr3Q7TPB0 716 aa19.79■□□□□ 0.76
Gm28074-201ENSMUST00000190424 Gab3Q8BSM5 595 aa19.68■□□□□ 0.74
Gm28074-201ENSMUST00000190424 Senp3Q9EP97 568 aaKnown RBP18.85■□□□□ 0.61
Gm28074-201ENSMUST00000190424 Kcna4Q61423 654 aa18.01■□□□□ 0.47
Gm28074-201ENSMUST00000190424 Trap1aP19473 224 aa16.63■□□□□ 0.25
Gm28074-201ENSMUST00000190424 Hoxd11P23813 323 aa16.63■□□□□ 0.25
Gm28074-201ENSMUST00000190424 Fam163aQ8CAA5 168 aa16.61■□□□□ 0.25
Gm28074-201ENSMUST00000190424 Dmrt2Q8BG36 561 aa16.1■□□□□ 0.17
Gm28074-201ENSMUST00000190424 Znf219Q6IQX8 726 aa15.98■□□□□ 0.15
Gm28074-201ENSMUST00000190424 Ppargc1bQ8VHJ7 1014 aa15.76■□□□□ 0.11
Gm28074-201ENSMUST00000190424 Chrna2Q91X60 512 aa15.75■□□□□ 0.11
Gm28074-201ENSMUST00000190424 Rsph4aQ8BYM7 716 aa15.64■□□□□ 0.09
Gm28074-201ENSMUST00000190424 Rimbp2Q80U40 1072 aa15.42■□□□□ 0.06
Gm28074-201ENSMUST00000190424 Slc4a1apE9PX68 744 aa15.4■□□□□ 0.06
Gm28074-201ENSMUST00000190424 Dnajc5bQ9CQ94 199 aa15.33■□□□□ 0.05
Gm28074-201ENSMUST00000190424 ArsiQ32KI9 573 aa15.33■□□□□ 0.04
Gm28074-201ENSMUST00000190424 Atf5O70191 283 aa15.31■□□□□ 0.04
Gm28074-201ENSMUST00000190424 Ppp4r2Q0VGB7 417 aa15.18■□□□□ 0.02
Gm28074-201ENSMUST00000190424 Hs6st3Q9QYK4 470 aa15.14■□□□□ 0.01
Gm28074-201ENSMUST00000190424 Akt1s1Q9D1F4 257 aa15.13■□□□□ 0.01
Gm28074-201ENSMUST00000190424 Slc34a2Q9DBP0 697 aa14.84□□□□□ -0.03
Gm28074-201ENSMUST00000190424 1700123L14RikQ3V2K7 440 aa14.76□□□□□ -0.05
Gm28074-201ENSMUST00000190424 Bach1P97302 739 aa14.63□□□□□ -0.07
Gm28074-201ENSMUST00000190424 Sox12Q04890 314 aa14.52□□□□□ -0.08
Gm28074-201ENSMUST00000190424 WdpcpQ8C456 722 aa14.26□□□□□ -0.13
Gm28074-201ENSMUST00000190424 Fam71e1A1L3C1 212 aa14.09□□□□□ -0.15
Gm28074-201ENSMUST00000190424 Cdca7Q9D0M2 382 aa14.05□□□□□ -0.16
Gm28074-201ENSMUST00000190424 C1qtnf12Q8R2Z0 308 aa14.03□□□□□ -0.16
Gm28074-201ENSMUST00000190424 Nlrp6Q91WS2 869 aa13.99□□□□□ -0.17
Gm28074-201ENSMUST00000190424 GapdhsQ64467 440 aa13.94□□□□□ -0.18
Gm28074-201ENSMUST00000190424 Ifnlr1Q8CGK5 535 aa13.82□□□□□ -0.2
Gm28074-201ENSMUST00000190424 Egfem1Q8C088 590 aa13.79□□□□□ -0.2
Gm28074-201ENSMUST00000190424 G430095P16RikE9Q913 147 aa13.78□□□□□ -0.2
Gm28074-201ENSMUST00000190424 Znf704Q9ERQ3 566 aa13.77□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Zbtb7aO88939 569 aaKnown RBP13.76□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Grwd1Q810D6 446 aaKnown RBP13.72□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Ube2uB1AUC4 352 aa13.71□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Slc4a5E9Q3M5 1116 aa13.7□□□□□ -0.22
Gm28074-201ENSMUST00000190424 AcrbpQ3V140 540 aa13.69□□□□□ -0.22
Gm28074-201ENSMUST00000190424 Riok3Q9DBU3 519 aaKnown RBP13.69□□□□□ -0.22
Gm28074-201ENSMUST00000190424 Pde4cQ3UEI1 686 aa13.67□□□□□ -0.22
Gm28074-201ENSMUST00000190424 Npm2Q80W85 207 aa13.63□□□□□ -0.23
Gm28074-201ENSMUST00000190424 Ms4a5Q810P8 197 aa13.61□□□□□ -0.23
Gm28074-201ENSMUST00000190424 MyclP10166 368 aa13.57□□□□□ -0.24
Gm28074-201ENSMUST00000190424 Trim41Q5NCC3 630 aa13.56□□□□□ -0.24
Gm28074-201ENSMUST00000190424 Zbtb12Q9Z150 459 aa13.51□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Rnf216P58283 853 aa13.49□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Prm3Q62100 101 aa13.48□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Abcb7Q61102 752 aaKnown RBP13.47□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Gtpbp6Q3U6U5 514 aa13.41□□□□□ -0.26
Gm28074-201ENSMUST00000190424 Rtn4Q99P72 1162 aaKnown RBP13.34□□□□□ -0.27
Gm28074-201ENSMUST00000190424 Styxl1Q9DAR2 321 aa13.29□□□□□ -0.28
Gm28074-201ENSMUST00000190424 Nkx1-1G3UXB3 402 aa13.28□□□□□ -0.28
Gm28074-201ENSMUST00000190424 Tshz2Q68FE9 1030 aa13.24□□□□□ -0.29
Gm28074-201ENSMUST00000190424 Fbln2P37889 1221 aa13.15□□□□□ -0.3
Gm28074-201ENSMUST00000190424 Npm3Q9CPP0 175 aaKnown RBP13.03□□□□□ -0.32
Gm28074-201ENSMUST00000190424 MpndQ3TV65 487 aa13□□□□□ -0.33
Gm28074-201ENSMUST00000190424 Skida1Q80YR3 822 aa12.9□□□□□ -0.34
Gm28074-201ENSMUST00000190424 Kcnn1Q9EQR3 537 aa12.82□□□□□ -0.36
Gm28074-201ENSMUST00000190424 Znf703P0CL69 594 aa12.79□□□□□ -0.36
Gm28074-201ENSMUST00000190424 Ildr2B5TVM2 661 aa12.78□□□□□ -0.36
Gm28074-201ENSMUST00000190424 Prr29B1ARI9 187 aa12.75□□□□□ -0.37
Gm28074-201ENSMUST00000190424 Tcf3P15806 651 aa12.74□□□□□ -0.37
Gm28074-201ENSMUST00000190424 Pitpnm1O35954 1243 aa12.71□□□□□ -0.38
Gm28074-201ENSMUST00000190424 Ppp1r37Q8BKR5 712 aa12.68□□□□□ -0.38
Gm28074-201ENSMUST00000190424 Ehmt2Q9Z148 1263 aaKnown RBP12.66□□□□□ -0.38
Gm28074-201ENSMUST00000190424 Cacnb1Q8R3Z5 597 aa12.64□□□□□ -0.39
Gm28074-201ENSMUST00000190424 Trim35Q8C006 501 aa12.61□□□□□ -0.39
Gm28074-201ENSMUST00000190424 Kank3Q9Z1P7 791 aa12.57□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Clcn6O35454 870 aa12.56□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Pip4p2Q9CZX7 257 aa12.56□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Lrrc43Q3V0L5 667 aa12.54□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Ecm2Q5FW85 670 aa12.51□□□□□ -0.41
Gm28074-201ENSMUST00000190424 Jarid2Q62315 1234 aa12.51□□□□□ -0.41
Gm28074-201ENSMUST00000190424 Cadps2Q8BYR5 1297 aa12.45□□□□□ -0.42
Gm28074-201ENSMUST00000190424 Nyap1Q6PFX7 833 aa12.4□□□□□ -0.43
Gm28074-201ENSMUST00000190424 Hnrnpul2Q00PI9 745 aaKnown RBP12.25□□□□□ -0.45
Gm28074-201ENSMUST00000190424 Sra1Q80VJ2 232 aa12.22□□□□□ -0.45
Gm28074-201ENSMUST00000190424 SnphQ80U23 495 aa12.2□□□□□ -0.46
Gm28074-201ENSMUST00000190424 MycnP03966 462 aaKnown RBP12.17□□□□□ -0.46
Gm28074-201ENSMUST00000190424 Prdm10Q3UTQ7 1184 aa12.17□□□□□ -0.46
Gm28074-201ENSMUST00000190424 Dok7Q18PE0 504 aa12.11□□□□□ -0.47
Gm28074-201ENSMUST00000190424 Hdac5Q9Z2V6 1113 aa12.08□□□□□ -0.47
Gm28074-201ENSMUST00000190424 Pde4dQ01063 747 aa12.05□□□□□ -0.48
Gm28074-201ENSMUST00000190424 Spock2Q9ER58 423 aa12.03□□□□□ -0.48
Gm28074-201ENSMUST00000190424 Repin1Q5U4E2 545 aa12.02□□□□□ -0.48
Gm28074-201ENSMUST00000190424 Fam117bQ3U3E2 584 aa12.01□□□□□ -0.49
Gm28074-201ENSMUST00000190424 Ppp6r1Q7TSI3 856 aa11.99□□□□□ -0.49
Gm28074-201ENSMUST00000190424 Zbtb7bQ64321 544 aa11.96□□□□□ -0.49
Gm28074-201ENSMUST00000190424 Gm13697A2AK42 830 aa11.93□□□□□ -0.5
Gm28074-201ENSMUST00000190424 PygbQ8CI94 843 aaKnown RBP11.93□□□□□ -0.5
Gm28074-201ENSMUST00000190424 CrebzfQ91ZR3 358 aa11.89□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Atad2Q8CDM1 1040 aa11.88□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Pdap1Q3UHX2 181 aaKnown RBP11.86□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Foxp4Q9DBY0 795 aaKnown RBP11.86□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Ferd3lQ923Z4 168 aa11.83□□□□□ -0.52
Gm28074-201ENSMUST00000190424 Chrm1P12657 460 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms