RNA–Protein interactions for RNA: ENSMUST00000188272.1

Gm28878-201, mousemouse

TSL 5 BASIC

Gene Gm28878, Length 2,167 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28878-201ENSMUST00000188272 Chic1Q8CBW7 227 aa16.53■□□□□ 0.24
Gm28878-201ENSMUST00000188272 Mapk8ip2Q9ERE9 830 aa16.45■□□□□ 0.22
Gm28878-201ENSMUST00000188272 NischQ80TM9 1593 aa15.96■□□□□ 0.15
Gm28878-201ENSMUST00000188272 Gm35339A0A140LHH9 1649 aa15.88■□□□□ 0.13
Gm28878-201ENSMUST00000188272 Abcc9P70170 1546 aa15.48■□□□□ 0.07
Gm28878-201ENSMUST00000188272 Abcc8B2RUS7 1588 aa15.26■□□□□ 0.03
Gm28878-201ENSMUST00000188272 Phf23Q8BSN5 401 aa15.02□□□□□ -0.01
Gm28878-201ENSMUST00000188272 Rpgrip1Q9EPQ2 1331 aa14.42□□□□□ -0.1
Gm28878-201ENSMUST00000188272 Rhox8Q6VSS7 320 aa14.4□□□□□ -0.1
Gm28878-201ENSMUST00000188272 ScribQ80U72 1612 aa14.36□□□□□ -0.11
Gm28878-201ENSMUST00000188272 Dcaf1Q80TR8 1506 aa14.23□□□□□ -0.13
Gm28878-201ENSMUST00000188272 Plppr3Q7TPB0 716 aa14.16□□□□□ -0.14
Gm28878-201ENSMUST00000188272 Gab3Q8BSM5 595 aa14.16□□□□□ -0.14
Gm28878-201ENSMUST00000188272 Kdm5dQ62240 1548 aa14.03□□□□□ -0.16
Gm28878-201ENSMUST00000188272 NacadQ5SWP3 1504 aa14.02□□□□□ -0.16
Gm28878-201ENSMUST00000188272 Rb1cc1Q9ESK9 1588 aa13.94□□□□□ -0.18
Gm28878-201ENSMUST00000188272 Rtl1Q7M732 1744 aa13.93□□□□□ -0.18
Gm28878-201ENSMUST00000188272 Pcgf6Q99NA9 353 aa13.9□□□□□ -0.18
Gm28878-201ENSMUST00000188272 Ccdc180J3QNE4 1664 aa13.86□□□□□ -0.19
Gm28878-201ENSMUST00000188272 Baz1aO88379 1555 aa13.8□□□□□ -0.2
Gm28878-201ENSMUST00000188272 Sycp2Q9CUU3 1500 aa13.71□□□□□ -0.21
Gm28878-201ENSMUST00000188272 Acin1Q9JIX8 1338 aaKnown RBP13.71□□□□□ -0.22
Gm28878-201ENSMUST00000188272 Crybg2B7ZCC2 1516 aa13.7□□□□□ -0.22
Gm28878-201ENSMUST00000188272 Senp3Q9EP97 568 aaKnown RBP13.62□□□□□ -0.23
Gm28878-201ENSMUST00000188272 Zcchc6Q5BLK4 1491 aaKnown RBP13.5□□□□□ -0.25
Gm28878-201ENSMUST00000188272 Myt1Q8CFC2 1127 aa13.5□□□□□ -0.25
Gm28878-201ENSMUST00000188272 Smarca2Q6DIC0 1577 aa13.44□□□□□ -0.26
Gm28878-201ENSMUST00000188272 BicraF8VPZ9 1578 aa13.43□□□□□ -0.26
Gm28878-201ENSMUST00000188272 Ccdc136Q3TVA9 1136 aa13.4□□□□□ -0.26
Gm28878-201ENSMUST00000188272 Las1lA2BE28 776 aaKnown RBP13.39□□□□□ -0.27
Gm28878-201ENSMUST00000188272 DiexfQ8BTT6 772 aaKnown RBP13.39□□□□□ -0.27
Gm28878-201ENSMUST00000188272 CenpbP27790 599 aa13.35□□□□□ -0.27
Gm28878-201ENSMUST00000188272 Neurod1Q60867 357 aa13.34□□□□□ -0.27
Gm28878-201ENSMUST00000188272 Trim41Q5NCC3 630 aa13.24□□□□□ -0.29
Gm28878-201ENSMUST00000188272 1700123L14RikQ3V2K7 440 aa13.2□□□□□ -0.3
Gm28878-201ENSMUST00000188272 Cecr2E9Q2Z1 1453 aa13.19□□□□□ -0.3
Gm28878-201ENSMUST00000188272 Supt5hO55201 1082 aaKnown RBP13.14□□□□□ -0.31
Gm28878-201ENSMUST00000188272 Bcl11aQ9QYE3 773 aa13.14□□□□□ -0.31
Gm28878-201ENSMUST00000188272 Brd4Q9ESU6 1400 aaKnown RBP13.13□□□□□ -0.31
Gm28878-201ENSMUST00000188272 HrcG5E8J6 738 aa13.08□□□□□ -0.31
Gm28878-201ENSMUST00000188272 Smarca4Q3TKT4 1613 aaKnown RBP13.04□□□□□ -0.32
Gm28878-201ENSMUST00000188272 Synj1Q8CHC4 1574 aa13.01□□□□□ -0.33
Gm28878-201ENSMUST00000188272 CftrP26361 1476 aa13□□□□□ -0.33
Gm28878-201ENSMUST00000188272 Pds5bQ4VA53 1446 aaKnown RBP12.96□□□□□ -0.33
Gm28878-201ENSMUST00000188272 Atad2bE9Q166 1460 aaKnown RBP12.95□□□□□ -0.34
Gm28878-201ENSMUST00000188272 Cttnbp2B9EJA2 1648 aa12.94□□□□□ -0.34
Gm28878-201ENSMUST00000188272 Kcna4Q61423 654 aa12.9□□□□□ -0.34
Gm28878-201ENSMUST00000188272 Csrnp3P59055 597 aa12.89□□□□□ -0.35
Gm28878-201ENSMUST00000188272 Anks4bQ8K3X6 423 aa12.88□□□□□ -0.35
Gm28878-201ENSMUST00000188272 Iqgap2Q3UQ44 1575 aa12.88□□□□□ -0.35
Gm28878-201ENSMUST00000188272 Esf1Q3V1V3 845 aaKnown RBP12.87□□□□□ -0.35
Gm28878-201ENSMUST00000188272 Ehmt2Q9Z148 1263 aaKnown RBP12.87□□□□□ -0.35
Gm28878-201ENSMUST00000188272 Golga3P55937 1487 aa12.87□□□□□ -0.35
Gm28878-201ENSMUST00000188272 Aplp2Q06335 707 aa12.86□□□□□ -0.35
Gm28878-201ENSMUST00000188272 Cngb1E1AZ71 1325 aa12.84□□□□□ -0.35
Gm28878-201ENSMUST00000188272 PrkcshO08795 521 aa12.81□□□□□ -0.36
Gm28878-201ENSMUST00000188272 Top2bQ64511 1612 aa12.76□□□□□ -0.37
Gm28878-201ENSMUST00000188272 Cep164Q5DU05 1446 aa12.74□□□□□ -0.37
Gm28878-201ENSMUST00000188272 Amer1Q7TS75 1132 aa12.71□□□□□ -0.37
Gm28878-201ENSMUST00000188272 Rsf1E9PWW9 1441 aaKnown RBP12.7□□□□□ -0.38
Gm28878-201ENSMUST00000188272 Frmpd1A2AKB4 1549 aa12.69□□□□□ -0.38
Gm28878-201ENSMUST00000188272 Wdr62Q3U3T8 1523 aa12.68□□□□□ -0.38
Gm28878-201ENSMUST00000188272 Ercc6F8VPZ5 1481 aa12.67□□□□□ -0.38
Gm28878-201ENSMUST00000188272 Ccdc88bQ4QRL3 1481 aa12.67□□□□□ -0.38
Gm28878-201ENSMUST00000188272 Fmn1Q05860 1466 aa12.6□□□□□ -0.39
Gm28878-201ENSMUST00000188272 Cc2d2aQ8CFW7 1633 aa12.59□□□□□ -0.39
Gm28878-201ENSMUST00000188272 Thoc2B1AZI6 1594 aaKnown RBP12.59□□□□□ -0.39
Gm28878-201ENSMUST00000188272 Phldb1Q6PDH0 1371 aaKnown RBP12.52□□□□□ -0.41
Gm28878-201ENSMUST00000188272 Unc13aQ4KUS2 1712 aa12.51□□□□□ -0.41
Gm28878-201ENSMUST00000188272 Sall2Q9QX96 1004 aa12.49□□□□□ -0.41
Gm28878-201ENSMUST00000188272 TnnQ80Z71 1560 aa12.48□□□□□ -0.41
Gm28878-201ENSMUST00000188272 Ifnlr1Q8CGK5 535 aa12.48□□□□□ -0.41
Gm28878-201ENSMUST00000188272 Lamc3Q9R0B6 1581 aa12.48□□□□□ -0.41
Gm28878-201ENSMUST00000188272 Top2aQ01320 1528 aaKnown RBP12.45□□□□□ -0.42
Gm28878-201ENSMUST00000188272 Kif15Q6P9L6 1387 aa12.44□□□□□ -0.42
Gm28878-201ENSMUST00000188272 Fam135aQ6NS59 1506 aa12.42□□□□□ -0.42
Gm28878-201ENSMUST00000188272 Ubl4bQ9CQ84 188 aa12.42□□□□□ -0.42
Gm28878-201ENSMUST00000188272 Gm38655A0A286YDK6 273 aa12.37□□□□□ -0.43
Gm28878-201ENSMUST00000188272 Fam71e1A1L3C1 212 aa12.37□□□□□ -0.43
Gm28878-201ENSMUST00000188272 Zeb1Q64318 1117 aa12.37□□□□□ -0.43
Gm28878-201ENSMUST00000188272 Rapgef2Q8CHG7 1496 aa12.34□□□□□ -0.43
Gm28878-201ENSMUST00000188272 Ccdc18Q640L5 1455 aa12.31□□□□□ -0.44
Gm28878-201ENSMUST00000188272 Cux2P70298 1426 aa12.3□□□□□ -0.44
Gm28878-201ENSMUST00000188272 Baz1bQ9Z277 1479 aa12.3□□□□□ -0.44
Gm28878-201ENSMUST00000188272 Camsap1A2AHC3 1581 aa12.3□□□□□ -0.44
Gm28878-201ENSMUST00000188272 Il27Q8K3I6 234 aa12.3□□□□□ -0.44
Gm28878-201ENSMUST00000188272 Cdk11bP24788 784 aaKnown RBP12.29□□□□□ -0.44
Gm28878-201ENSMUST00000188272 Dnajc5bQ9CQ94 199 aa12.29□□□□□ -0.44
Gm28878-201ENSMUST00000188272 Npm1Q61937 292 aaKnown RBP12.26□□□□□ -0.45
Gm28878-201ENSMUST00000188272 Fam163aQ8CAA5 168 aa12.25□□□□□ -0.45
Gm28878-201ENSMUST00000188272 Cep162Q6ZQ06 1403 aa12.25□□□□□ -0.45
Gm28878-201ENSMUST00000188272 NefmP08553 848 aa12.25□□□□□ -0.45
Gm28878-201ENSMUST00000188272 Npm2Q80W85 207 aa12.25□□□□□ -0.45
Gm28878-201ENSMUST00000188272 NrkQ9R0G8 1455 aa12.24□□□□□ -0.45
Gm28878-201ENSMUST00000188272 Fgd1P52734 960 aa12.21□□□□□ -0.45
Gm28878-201ENSMUST00000188272 Grin2bQ01097 1482 aa12.21□□□□□ -0.46
Gm28878-201ENSMUST00000188272 Nop58Q6DFW4 536 aaKnown RBP12.2□□□□□ -0.46
Gm28878-201ENSMUST00000188272 PtprkP35822 1457 aa12.2□□□□□ -0.46
Gm28878-201ENSMUST00000188272 Hdac5Q9Z2V6 1113 aa12.19□□□□□ -0.46
Gm28878-201ENSMUST00000188272 Shroom4Q1W617 1475 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms