RNA–Protein interactions for RNA: ENSMUST00000187655.1

Gm28449-201, mousemouse

TSL 3 BASIC

Gene Gm28449, Length 506 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28449-201ENSMUST00000187655 Chic1Q8CBW7 227 aa28.71■■■□□ 2.19
Gm28449-201ENSMUST00000187655 Mapk8ip2Q9ERE9 830 aa28.09■■■□□ 2.09
Gm28449-201ENSMUST00000187655 Phf23Q8BSN5 401 aa25.67■■□□□ 1.7
Gm28449-201ENSMUST00000187655 Plppr3Q7TPB0 716 aa24.66■■□□□ 1.54
Gm28449-201ENSMUST00000187655 Gab3Q8BSM5 595 aa24.59■■□□□ 1.53
Gm28449-201ENSMUST00000187655 Senp3Q9EP97 568 aaKnown RBP23.49■■□□□ 1.35
Gm28449-201ENSMUST00000187655 Kcna4Q61423 654 aa22.26■■□□□ 1.15
Gm28449-201ENSMUST00000187655 Fam163aQ8CAA5 168 aa20.89■□□□□ 0.93
Gm28449-201ENSMUST00000187655 Hoxd11P23813 323 aa20.85■□□□□ 0.93
Gm28449-201ENSMUST00000187655 Trap1aP19473 224 aa20.76■□□□□ 0.91
Gm28449-201ENSMUST00000187655 Znf219Q6IQX8 726 aa20.08■□□□□ 0.81
Gm28449-201ENSMUST00000187655 Dmrt2Q8BG36 561 aa19.92■□□□□ 0.78
Gm28449-201ENSMUST00000187655 Chrna2Q91X60 512 aa19.7■□□□□ 0.74
Gm28449-201ENSMUST00000187655 Rsph4aQ8BYM7 716 aa19.56■□□□□ 0.72
Gm28449-201ENSMUST00000187655 ArsiQ32KI9 573 aa19.33■□□□□ 0.68
Gm28449-201ENSMUST00000187655 Rimbp2Q80U40 1072 aa19.26■□□□□ 0.67
Gm28449-201ENSMUST00000187655 Ppargc1bQ8VHJ7 1014 aa19.26■□□□□ 0.67
Gm28449-201ENSMUST00000187655 Dnajc5bQ9CQ94 199 aa19.24■□□□□ 0.67
Gm28449-201ENSMUST00000187655 Slc4a1apE9PX68 744 aa19.05■□□□□ 0.64
Gm28449-201ENSMUST00000187655 Akt1s1Q9D1F4 257 aa19■□□□□ 0.63
Gm28449-201ENSMUST00000187655 Atf5O70191 283 aa18.91■□□□□ 0.62
Gm28449-201ENSMUST00000187655 Hs6st3Q9QYK4 470 aa18.88■□□□□ 0.61
Gm28449-201ENSMUST00000187655 Ppp4r2Q0VGB7 417 aa18.83■□□□□ 0.6
Gm28449-201ENSMUST00000187655 Slc34a2Q9DBP0 697 aa18.61■□□□□ 0.57
Gm28449-201ENSMUST00000187655 1700123L14RikQ3V2K7 440 aa18.22■□□□□ 0.51
Gm28449-201ENSMUST00000187655 Sox12Q04890 314 aa18.18■□□□□ 0.5
Gm28449-201ENSMUST00000187655 Bach1P97302 739 aa18.15■□□□□ 0.5
Gm28449-201ENSMUST00000187655 WdpcpQ8C456 722 aa17.7■□□□□ 0.42
Gm28449-201ENSMUST00000187655 C1qtnf12Q8R2Z0 308 aa17.43■□□□□ 0.38
Gm28449-201ENSMUST00000187655 Znf704Q9ERQ3 566 aa17.35■□□□□ 0.37
Gm28449-201ENSMUST00000187655 Cdca7Q9D0M2 382 aa17.31■□□□□ 0.36
Gm28449-201ENSMUST00000187655 Slc4a5E9Q3M5 1116 aa17.3■□□□□ 0.36
Gm28449-201ENSMUST00000187655 Ifnlr1Q8CGK5 535 aa17.29■□□□□ 0.36
Gm28449-201ENSMUST00000187655 Fam71e1A1L3C1 212 aa17.24■□□□□ 0.35
Gm28449-201ENSMUST00000187655 Nlrp6Q91WS2 869 aa17.23■□□□□ 0.35
Gm28449-201ENSMUST00000187655 Egfem1Q8C088 590 aa17.22■□□□□ 0.35
Gm28449-201ENSMUST00000187655 G430095P16RikE9Q913 147 aa17.15■□□□□ 0.34
Gm28449-201ENSMUST00000187655 Zbtb7aO88939 569 aaKnown RBP17.15■□□□□ 0.34
Gm28449-201ENSMUST00000187655 Grwd1Q810D6 446 aaKnown RBP17.15■□□□□ 0.34
Gm28449-201ENSMUST00000187655 GapdhsQ64467 440 aa17.06■□□□□ 0.32
Gm28449-201ENSMUST00000187655 Rnf216P58283 853 aa16.95■□□□□ 0.3
Gm28449-201ENSMUST00000187655 Zbtb12Q9Z150 459 aa16.95■□□□□ 0.3
Gm28449-201ENSMUST00000187655 Riok3Q9DBU3 519 aaKnown RBP16.93■□□□□ 0.3
Gm28449-201ENSMUST00000187655 Trim41Q5NCC3 630 aa16.92■□□□□ 0.3
Gm28449-201ENSMUST00000187655 Npm2Q80W85 207 aa16.92■□□□□ 0.3
Gm28449-201ENSMUST00000187655 AcrbpQ3V140 540 aa16.84■□□□□ 0.29
Gm28449-201ENSMUST00000187655 Ms4a5Q810P8 197 aa16.8■□□□□ 0.28
Gm28449-201ENSMUST00000187655 MyclP10166 368 aa16.77■□□□□ 0.28
Gm28449-201ENSMUST00000187655 Pde4cQ3UEI1 686 aa16.76■□□□□ 0.27
Gm28449-201ENSMUST00000187655 Abcb7Q61102 752 aaKnown RBP16.74■□□□□ 0.27
Gm28449-201ENSMUST00000187655 Gtpbp6Q3U6U5 514 aa16.71■□□□□ 0.27
Gm28449-201ENSMUST00000187655 Ube2uB1AUC4 352 aa16.61■□□□□ 0.25
Gm28449-201ENSMUST00000187655 Prm3Q62100 101 aa16.6■□□□□ 0.25
Gm28449-201ENSMUST00000187655 Nkx1-1G3UXB3 402 aa16.52■□□□□ 0.24
Gm28449-201ENSMUST00000187655 Rtn4Q99P72 1162 aaKnown RBP16.43■□□□□ 0.22
Gm28449-201ENSMUST00000187655 Styxl1Q9DAR2 321 aa16.36■□□□□ 0.21
Gm28449-201ENSMUST00000187655 Fbln2P37889 1221 aa16.29■□□□□ 0.2
Gm28449-201ENSMUST00000187655 Znf703P0CL69 594 aa16.16■□□□□ 0.18
Gm28449-201ENSMUST00000187655 Tshz2Q68FE9 1030 aa16.16■□□□□ 0.18
Gm28449-201ENSMUST00000187655 Ildr2B5TVM2 661 aa16.15■□□□□ 0.18
Gm28449-201ENSMUST00000187655 Npm3Q9CPP0 175 aaKnown RBP16.15■□□□□ 0.18
Gm28449-201ENSMUST00000187655 Kcnn1Q9EQR3 537 aa16.14■□□□□ 0.17
Gm28449-201ENSMUST00000187655 MpndQ3TV65 487 aa16.06■□□□□ 0.16
Gm28449-201ENSMUST00000187655 Prr29B1ARI9 187 aa16.02■□□□□ 0.16
Gm28449-201ENSMUST00000187655 Skida1Q80YR3 822 aa16.02■□□□□ 0.16
Gm28449-201ENSMUST00000187655 Cacnb1Q8R3Z5 597 aa15.97■□□□□ 0.15
Gm28449-201ENSMUST00000187655 Clcn6O35454 870 aa15.91■□□□□ 0.14
Gm28449-201ENSMUST00000187655 Pitpnm1O35954 1243 aa15.88■□□□□ 0.13
Gm28449-201ENSMUST00000187655 Kank3Q9Z1P7 791 aa15.78■□□□□ 0.12
Gm28449-201ENSMUST00000187655 Pip4p2Q9CZX7 257 aa15.75■□□□□ 0.11
Gm28449-201ENSMUST00000187655 Trim35Q8C006 501 aa15.73■□□□□ 0.11
Gm28449-201ENSMUST00000187655 Tcf3P15806 651 aa15.71■□□□□ 0.11
Gm28449-201ENSMUST00000187655 Ppp1r37Q8BKR5 712 aa15.63■□□□□ 0.09
Gm28449-201ENSMUST00000187655 Lrrc43Q3V0L5 667 aa15.58■□□□□ 0.08
Gm28449-201ENSMUST00000187655 Cadps2Q8BYR5 1297 aa15.55■□□□□ 0.08
Gm28449-201ENSMUST00000187655 Nyap1Q6PFX7 833 aa15.47■□□□□ 0.07
Gm28449-201ENSMUST00000187655 Jarid2Q62315 1234 aa15.46■□□□□ 0.07
Gm28449-201ENSMUST00000187655 Hnrnpul2Q00PI9 745 aaKnown RBP15.32■□□□□ 0.04
Gm28449-201ENSMUST00000187655 SnphQ80U23 495 aa15.24■□□□□ 0.03
Gm28449-201ENSMUST00000187655 Ehmt2Q9Z148 1263 aaKnown RBP15.23■□□□□ 0.03
Gm28449-201ENSMUST00000187655 Ecm2Q5FW85 670 aa15.22■□□□□ 0.03
Gm28449-201ENSMUST00000187655 Dok7Q18PE0 504 aa15.18■□□□□ 0.02
Gm28449-201ENSMUST00000187655 Sra1Q80VJ2 232 aa15.17■□□□□ 0.02
Gm28449-201ENSMUST00000187655 MycnP03966 462 aaKnown RBP15.06■□□□□ 0
Gm28449-201ENSMUST00000187655 Hdac5Q9Z2V6 1113 aa14.91□□□□□ -0.02
Gm28449-201ENSMUST00000187655 Foxp4Q9DBY0 795 aaKnown RBP14.9□□□□□ -0.02
Gm28449-201ENSMUST00000187655 Pde4dQ01063 747 aa14.83□□□□□ -0.04
Gm28449-201ENSMUST00000187655 Spock2Q9ER58 423 aa14.81□□□□□ -0.04
Gm28449-201ENSMUST00000187655 Repin1Q5U4E2 545 aa14.8□□□□□ -0.04
Gm28449-201ENSMUST00000187655 Zbtb7bQ64321 544 aa14.8□□□□□ -0.04
Gm28449-201ENSMUST00000187655 Fam117bQ3U3E2 584 aa14.79□□□□□ -0.04
Gm28449-201ENSMUST00000187655 PygbQ8CI94 843 aaKnown RBP14.75□□□□□ -0.05
Gm28449-201ENSMUST00000187655 ArntlQ9WTL8 632 aa14.75□□□□□ -0.05
Gm28449-201ENSMUST00000187655 Prdm10Q3UTQ7 1184 aa14.74□□□□□ -0.05
Gm28449-201ENSMUST00000187655 Gjc2Q8BQU6 440 aa14.74□□□□□ -0.05
Gm28449-201ENSMUST00000187655 CrebzfQ91ZR3 358 aa14.74□□□□□ -0.05
Gm28449-201ENSMUST00000187655 Gm13697A2AK42 830 aa14.72□□□□□ -0.05
Gm28449-201ENSMUST00000187655 Pdap1Q3UHX2 181 aaKnown RBP14.71□□□□□ -0.05
Gm28449-201ENSMUST00000187655 Atad2Q8CDM1 1040 aa14.68□□□□□ -0.06
Gm28449-201ENSMUST00000187655 Zranb1Q7M760 708 aa14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms