RNA–Protein interactions for RNA: ENSMUST00000185633.6

Xrn1-202, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 10,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-202ENSMUST00000185633 Gm35339A0A140LHH9 1649 aa8.58□□□□□ -1.04
Xrn1-202ENSMUST00000185633 Ccdc180J3QNE4 1664 aa7.84□□□□□ -1.16
Xrn1-202ENSMUST00000185633 Abcc9P70170 1546 aa7.82□□□□□ -1.16
Xrn1-202ENSMUST00000185633 NischQ80TM9 1593 aa7.68□□□□□ -1.18
Xrn1-202ENSMUST00000185633 Rtl1Q7M732 1744 aa7.65□□□□□ -1.19
Xrn1-202ENSMUST00000185633 Dcaf1Q80TR8 1506 aa7.63□□□□□ -1.19
Xrn1-202ENSMUST00000185633 Abcc8B2RUS7 1588 aa7.54□□□□□ -1.2
Xrn1-202ENSMUST00000185633 Dnajc5bQ9CQ94 199 aa7.3□□□□□ -1.24
Xrn1-202ENSMUST00000185633 Crybg2B7ZCC2 1516 aa7.19□□□□□ -1.26
Xrn1-202ENSMUST00000185633 ScribQ80U72 1612 aa7.09□□□□□ -1.27
Xrn1-202ENSMUST00000185633 Zcchc6Q5BLK4 1491 aaKnown RBP6.99□□□□□ -1.29
Xrn1-202ENSMUST00000185633 Smarca2Q6DIC0 1577 aa6.98□□□□□ -1.29
Xrn1-202ENSMUST00000185633 Baz1aO88379 1555 aa6.86□□□□□ -1.31
Xrn1-202ENSMUST00000185633 Baz1bQ9Z277 1479 aa6.79□□□□□ -1.32
Xrn1-202ENSMUST00000185633 NacadQ5SWP3 1504 aa6.78□□□□□ -1.32
Xrn1-202ENSMUST00000185633 Gpatch8A2A6A1 1505 aa6.74□□□□□ -1.33
Xrn1-202ENSMUST00000185633 Cngb1E1AZ71 1325 aa6.73□□□□□ -1.33
Xrn1-202ENSMUST00000185633 Kdm5dQ62240 1548 aa6.72□□□□□ -1.33
Xrn1-202ENSMUST00000185633 Rb1cc1Q9ESK9 1588 aa6.71□□□□□ -1.34
Xrn1-202ENSMUST00000185633 Sycp2Q9CUU3 1500 aa6.68□□□□□ -1.34
Xrn1-202ENSMUST00000185633 Pelp1Q9DBD5 1123 aaKnown RBP6.67□□□□□ -1.34
Xrn1-202ENSMUST00000185633 Rpgrip1Q9EPQ2 1331 aa6.67□□□□□ -1.34
Xrn1-202ENSMUST00000185633 Las1lA2BE28 776 aaKnown RBP6.65□□□□□ -1.34
Xrn1-202ENSMUST00000185633 BicraF8VPZ9 1578 aa6.61□□□□□ -1.35
Xrn1-202ENSMUST00000185633 Top2bQ64511 1612 aa6.54□□□□□ -1.36
Xrn1-202ENSMUST00000185633 Trim41Q5NCC3 630 aa6.49□□□□□ -1.37
Xrn1-202ENSMUST00000185633 Cttnbp2B9EJA2 1648 aa6.47□□□□□ -1.37
Xrn1-202ENSMUST00000185633 Eif4g1Q6NZJ6 1600 aaKnown RBP6.46□□□□□ -1.37
Xrn1-202ENSMUST00000185633 Rhox8Q6VSS7 320 aa6.46□□□□□ -1.37
Xrn1-202ENSMUST00000185633 TnnQ80Z71 1560 aa6.46□□□□□ -1.38
Xrn1-202ENSMUST00000185633 Cecr2E9Q2Z1 1453 aa6.4□□□□□ -1.39
Xrn1-202ENSMUST00000185633 4930567H17RikQ3V0K5 233 aa6.37□□□□□ -1.39
Xrn1-202ENSMUST00000185633 Amer1Q7TS75 1132 aa6.37□□□□□ -1.39
Xrn1-202ENSMUST00000185633 Smarca4Q3TKT4 1613 aaKnown RBP6.36□□□□□ -1.39
Xrn1-202ENSMUST00000185633 Wdr66E9Q743 1299 aa6.34□□□□□ -1.39
Xrn1-202ENSMUST00000185633 Kif21aQ9QXL2 1672 aa6.32□□□□□ -1.4
Xrn1-202ENSMUST00000185633 SynmQ70IV5 1561 aa6.31□□□□□ -1.4
Xrn1-202ENSMUST00000185633 Thoc2B1AZI6 1594 aaKnown RBP6.25□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Myt1Q8CFC2 1127 aa6.24□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Cc2d2aQ8CFW7 1633 aa6.24□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Brd4Q9ESU6 1400 aaKnown RBP6.23□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Erich3F6QRE9 1637 aa6.22□□□□□ -1.41
Xrn1-202ENSMUST00000185633 CftrP26361 1476 aa6.22□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Unc13aQ4KUS2 1712 aa6.22□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Cep164Q5DU05 1446 aa6.22□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Map3k1P53349 1493 aa6.22□□□□□ -1.41
Xrn1-202ENSMUST00000185633 Lamc3Q9R0B6 1581 aa6.2□□□□□ -1.42
Xrn1-202ENSMUST00000185633 HrcG5E8J6 738 aa6.2□□□□□ -1.42
Xrn1-202ENSMUST00000185633 Top2aQ01320 1528 aaKnown RBP6.2□□□□□ -1.42
Xrn1-202ENSMUST00000185633 Peg3Q3URU2 1571 aa6.2□□□□□ -1.42
Xrn1-202ENSMUST00000185633 Atad2bE9Q166 1460 aaKnown RBP6.18□□□□□ -1.42
Xrn1-202ENSMUST00000185633 Fam135aQ6NS59 1506 aa6.18□□□□□ -1.42
Xrn1-202ENSMUST00000185633 Ccdc136Q3TVA9 1136 aa6.18□□□□□ -1.42
Xrn1-202ENSMUST00000185633 TchhA0A0B4J1F9 1599 aa6.18□□□□□ -1.42
Xrn1-202ENSMUST00000185633 CenpbP27790 599 aa6.17□□□□□ -1.42
Xrn1-202ENSMUST00000185633 Synj1Q8CHC4 1574 aa6.15□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Pprc1Q6NZN1 1644 aa6.15□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Wdr62Q3U3T8 1523 aa6.13□□□□□ -1.43
Xrn1-202ENSMUST00000185633 EprsQ8CGC7 1512 aaKnown RBP6.13□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Ccdc18Q640L5 1455 aa6.13□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Dnajc5P60904 198 aa6.12□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Iqgap2Q3UQ44 1575 aa6.12□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Golga3P55937 1487 aa6.12□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Frmpd1A2AKB4 1549 aa6.11□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Ehmt2Q9Z148 1263 aaKnown RBP6.11□□□□□ -1.43
Xrn1-202ENSMUST00000185633 AqrQ8CFQ3 1481 aaKnown RBP6.11□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Pcdh10E9PXQ7 1057 aa6.1□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Dnajc5gQ8C632 165 aa6.1□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Cfap65Q3V0B4 1847 aa6.09□□□□□ -1.43
Xrn1-202ENSMUST00000185633 NrkQ9R0G8 1455 aa6.09□□□□□ -1.43
Xrn1-202ENSMUST00000185633 Fhod3Q76LL6 1578 aa6.08□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Fmn1Q05860 1466 aa6.08□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Pbrm1Q8BSQ9 1634 aaKnown RBP6.08□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Ubl4bQ9CQ84 188 aa6.06□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Rapgef2Q8CHG7 1496 aa6.04□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Pds5bQ4VA53 1446 aaKnown RBP6.04□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Lmo7E9PYF4 1699 aaKnown RBP6.03□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Camsap1A2AHC3 1581 aa6.03□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Il27Q8K3I6 234 aa6.03□□□□□ -1.44
Xrn1-202ENSMUST00000185633 Pdcd11Q6NS46 1862 aaKnown RBP6.02□□□□□ -1.45
Xrn1-202ENSMUST00000185633 Kif21bQ9QXL1 1668 aa6.01□□□□□ -1.45
Xrn1-202ENSMUST00000185633 Neurl4Q5NCX5 1563 aa6□□□□□ -1.45
Xrn1-202ENSMUST00000185633 Stra8P70278 393 aa5.99□□□□□ -1.45
Xrn1-202ENSMUST00000185633 Kdm5bQ80Y84 1544 aa5.97□□□□□ -1.45
Xrn1-202ENSMUST00000185633 Camsap2Q8C1B1 1461 aa5.96□□□□□ -1.45
Xrn1-202ENSMUST00000185633 Kiaa1210E9Q0C6 1637 aa5.96□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Ercc6F8VPZ5 1481 aa5.96□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Adamts12Q811B3 1600 aa5.94□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Cul7Q8VE73 1689 aa5.94□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Setbp1Q9Z180 1582 aa5.94□□□□□ -1.46
Xrn1-202ENSMUST00000185633 4933416C03RikQ3V063 378 aa5.93□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Ttbk1Q6PCN3 1308 aa5.92□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Gcc2Q8CHG3 1679 aa5.92□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Abca5Q8K448 1642 aa5.91□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Ythdc1E9Q5K9 736 aaKnown RBP5.91□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Rtl5Q5DTT4 599 aa5.91□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Plppr3Q7TPB0 716 aa5.9□□□□□ -1.46
Xrn1-202ENSMUST00000185633 Setd1bQ8CFT2 1985 aa5.89□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Polr1aO35134 1717 aaKnown RBP5.89□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Phldb1Q6PDH0 1371 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms