RNA–Protein interactions for RNA: ENSMUST00000180829.7

Ccdc136-208, Transcript of Coiled-coil domain-containing protein 136, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc136, Length 3,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc136-208ENSMUST00000180829 NischQ80TM9 1593 aa18.2■□□□□ 0.5
Ccdc136-208ENSMUST00000180829 Rhox8Q6VSS7 320 aa17.89■□□□□ 0.45
Ccdc136-208ENSMUST00000180829 Rpgrip1Q9EPQ2 1331 aa17.69■□□□□ 0.42
Ccdc136-208ENSMUST00000180829 Ehmt2Q9Z148 1263 aaKnown RBP17.61■□□□□ 0.41
Ccdc136-208ENSMUST00000180829 Abcc9P70170 1546 aa17.46■□□□□ 0.39
Ccdc136-208ENSMUST00000180829 Pcgf6Q99NA9 353 aa17.38■□□□□ 0.37
Ccdc136-208ENSMUST00000180829 Acin1Q9JIX8 1338 aaKnown RBP17.31■□□□□ 0.36
Ccdc136-208ENSMUST00000180829 Gm35339A0A140LHH9 1649 aa17.27■□□□□ 0.36
Ccdc136-208ENSMUST00000180829 Abcc8B2RUS7 1588 aa17.14■□□□□ 0.33
Ccdc136-208ENSMUST00000180829 Supt5hO55201 1082 aaKnown RBP16.93■□□□□ 0.3
Ccdc136-208ENSMUST00000180829 Neurod1Q60867 357 aa16.87■□□□□ 0.29
Ccdc136-208ENSMUST00000180829 Rtl1Q7M732 1744 aa16.71■□□□□ 0.27
Ccdc136-208ENSMUST00000180829 Ccdc180J3QNE4 1664 aa16.69■□□□□ 0.26
Ccdc136-208ENSMUST00000180829 Ccdc136Q3TVA9 1136 aa16.58■□□□□ 0.24
Ccdc136-208ENSMUST00000180829 Zeb1Q64318 1117 aa16.51■□□□□ 0.23
Ccdc136-208ENSMUST00000180829 1700123L14RikQ3V2K7 440 aa16.49■□□□□ 0.23
Ccdc136-208ENSMUST00000180829 Trim41Q5NCC3 630 aa16.48■□□□□ 0.23
Ccdc136-208ENSMUST00000180829 Las1lA2BE28 776 aaKnown RBP16.47■□□□□ 0.23
Ccdc136-208ENSMUST00000180829 Csrnp3P59055 597 aa16.42■□□□□ 0.22
Ccdc136-208ENSMUST00000180829 Cngb1E1AZ71 1325 aa16.27■□□□□ 0.19
Ccdc136-208ENSMUST00000180829 Gm38655A0A286YDK6 273 aa16.27■□□□□ 0.19
Ccdc136-208ENSMUST00000180829 CenpbP27790 599 aa16.24■□□□□ 0.19
Ccdc136-208ENSMUST00000180829 Dcaf1Q80TR8 1506 aa16.22■□□□□ 0.19
Ccdc136-208ENSMUST00000180829 Sall2Q9QX96 1004 aa16.17■□□□□ 0.18
Ccdc136-208ENSMUST00000180829 DiexfQ8BTT6 772 aaKnown RBP16.12■□□□□ 0.17
Ccdc136-208ENSMUST00000180829 Zcchc6Q5BLK4 1491 aaKnown RBP16.07■□□□□ 0.16
Ccdc136-208ENSMUST00000180829 HrcG5E8J6 738 aa16.07■□□□□ 0.16
Ccdc136-208ENSMUST00000180829 Ppargc1bQ8VHJ7 1014 aa16.06■□□□□ 0.16
Ccdc136-208ENSMUST00000180829 Anks4bQ8K3X6 423 aa16.05■□□□□ 0.16
Ccdc136-208ENSMUST00000180829 Rb1cc1Q9ESK9 1588 aa15.96■□□□□ 0.15
Ccdc136-208ENSMUST00000180829 ScribQ80U72 1612 aa15.93■□□□□ 0.14
Ccdc136-208ENSMUST00000180829 Wdr66E9Q743 1299 aa15.92■□□□□ 0.14
Ccdc136-208ENSMUST00000180829 Bcl11aQ9QYE3 773 aa15.9■□□□□ 0.14
Ccdc136-208ENSMUST00000180829 Myt1Q8CFC2 1127 aa15.88■□□□□ 0.13
Ccdc136-208ENSMUST00000180829 Aplp2Q06335 707 aa15.82■□□□□ 0.12
Ccdc136-208ENSMUST00000180829 Gab3Q8BSM5 595 aa15.8■□□□□ 0.12
Ccdc136-208ENSMUST00000180829 Mier1Q5UAK0 511 aa15.79■□□□□ 0.12
Ccdc136-208ENSMUST00000180829 Cdk11bP24788 784 aaKnown RBP15.77■□□□□ 0.12
Ccdc136-208ENSMUST00000180829 Kdm5dQ62240 1548 aa15.77■□□□□ 0.12
Ccdc136-208ENSMUST00000180829 Nop58Q6DFW4 536 aaKnown RBP15.75■□□□□ 0.11
Ccdc136-208ENSMUST00000180829 Aebp2Q9Z248 504 aaKnown RBP15.73■□□□□ 0.11
Ccdc136-208ENSMUST00000180829 NefmP08553 848 aa15.72■□□□□ 0.11
Ccdc136-208ENSMUST00000180829 PrkcshO08795 521 aa15.7■□□□□ 0.1
Ccdc136-208ENSMUST00000180829 Mapk8ip2Q9ERE9 830 aa15.69■□□□□ 0.1
Ccdc136-208ENSMUST00000180829 Ifnlr1Q8CGK5 535 aa15.67■□□□□ 0.1
Ccdc136-208ENSMUST00000180829 Fam71e1A1L3C1 212 aa15.65■□□□□ 0.1
Ccdc136-208ENSMUST00000180829 Baz1aO88379 1555 aa15.65■□□□□ 0.1
Ccdc136-208ENSMUST00000180829 NacadQ5SWP3 1504 aa15.58■□□□□ 0.08
Ccdc136-208ENSMUST00000180829 SafbD3YXK2 937 aaKnown RBP15.57■□□□□ 0.08
Ccdc136-208ENSMUST00000180829 Esf1Q3V1V3 845 aaKnown RBP15.57■□□□□ 0.08
Ccdc136-208ENSMUST00000180829 Chic1Q8CBW7 227 aa15.5■□□□□ 0.07
Ccdc136-208ENSMUST00000180829 UbtfP25976 765 aaKnown RBP15.42■□□□□ 0.06
Ccdc136-208ENSMUST00000180829 Hnrnpul2Q00PI9 745 aaKnown RBP15.4■□□□□ 0.06
Ccdc136-208ENSMUST00000180829 ClspnQ80YR7 1315 aa15.38■□□□□ 0.05
Ccdc136-208ENSMUST00000180829 Ap3b1Q9Z1T1 1105 aa15.35■□□□□ 0.05
Ccdc136-208ENSMUST00000180829 Cep164Q5DU05 1446 aa15.28■□□□□ 0.04
Ccdc136-208ENSMUST00000180829 Ttbk1Q6PCN3 1308 aa15.24■□□□□ 0.03
Ccdc136-208ENSMUST00000180829 Smarca2Q6DIC0 1577 aa15.23■□□□□ 0.03
Ccdc136-208ENSMUST00000180829 Cecr2E9Q2Z1 1453 aa15.23■□□□□ 0.03
Ccdc136-208ENSMUST00000180829 Rsf1E9PWW9 1441 aaKnown RBP15.22■□□□□ 0.03
Ccdc136-208ENSMUST00000180829 Myt1lP97500 1187 aa15.22■□□□□ 0.03
Ccdc136-208ENSMUST00000180829 Sycp2Q9CUU3 1500 aa15.22■□□□□ 0.03
Ccdc136-208ENSMUST00000180829 Amer1Q7TS75 1132 aa15.18■□□□□ 0.02
Ccdc136-208ENSMUST00000180829 Brd4Q9ESU6 1400 aaKnown RBP15.14■□□□□ 0.01
Ccdc136-208ENSMUST00000180829 Ccdc88bQ4QRL3 1481 aa15.13■□□□□ 0.01
Ccdc136-208ENSMUST00000180829 TonslQ6NZL6 1363 aa15.1■□□□□ 0.01
Ccdc136-208ENSMUST00000180829 Crybg2B7ZCC2 1516 aa15.07■□□□□ 0
Ccdc136-208ENSMUST00000180829 Npm2Q80W85 207 aa15.05■□□□□ -0
Ccdc136-208ENSMUST00000180829 Anp32aO35381 247 aa15.01□□□□□ -0.01
Ccdc136-208ENSMUST00000180829 Nolc1E9Q5C9 702 aaKnown RBP15.01□□□□□ -0.01
Ccdc136-208ENSMUST00000180829 Golga3P55937 1487 aa15□□□□□ -0.01
Ccdc136-208ENSMUST00000180829 Tnnt3Q9QZ47 272 aa14.99□□□□□ -0.01
Ccdc136-208ENSMUST00000180829 Synj1Q8CHC4 1574 aa14.97□□□□□ -0.01
Ccdc136-208ENSMUST00000180829 Il27Q8K3I6 234 aa14.96□□□□□ -0.01
Ccdc136-208ENSMUST00000180829 Hdac5Q9Z2V6 1113 aa14.95□□□□□ -0.02
Ccdc136-208ENSMUST00000180829 Eid3Q3V124 375 aa14.93□□□□□ -0.02
Ccdc136-208ENSMUST00000180829 Slc24a1Q91WD8 1130 aa14.9□□□□□ -0.02
Ccdc136-208ENSMUST00000180829 BicraF8VPZ9 1578 aa14.88□□□□□ -0.03
Ccdc136-208ENSMUST00000180829 CftrP26361 1476 aa14.87□□□□□ -0.03
Ccdc136-208ENSMUST00000180829 Plekhg3Q4VAC9 1341 aa14.81□□□□□ -0.04
Ccdc136-208ENSMUST00000180829 Supt16hQ920B9 1047 aa14.81□□□□□ -0.04
Ccdc136-208ENSMUST00000180829 Calr4Q3TQS0 420 aa14.81□□□□□ -0.04
Ccdc136-208ENSMUST00000180829 Pelp1Q9DBD5 1123 aaKnown RBP14.78□□□□□ -0.04
Ccdc136-208ENSMUST00000180829 Ppp4r2Q0VGB7 417 aa14.77□□□□□ -0.05
Ccdc136-208ENSMUST00000180829 Znf710Q3U288 666 aa14.75□□□□□ -0.05
Ccdc136-208ENSMUST00000180829 Eif5bQ05D44 1216 aaKnown RBP14.73□□□□□ -0.05
Ccdc136-208ENSMUST00000180829 Plcd4Q8K3R3 807 aa14.73□□□□□ -0.05
Ccdc136-208ENSMUST00000180829 Rtl5Q5DTT4 599 aa14.72□□□□□ -0.05
Ccdc136-208ENSMUST00000180829 Pak3Q61036 559 aa14.68□□□□□ -0.06
Ccdc136-208ENSMUST00000180829 Cc2d2aQ8CFW7 1633 aa14.64□□□□□ -0.07
Ccdc136-208ENSMUST00000180829 Gtf3c3Q3TMP1 882 aa14.63□□□□□ -0.07
Ccdc136-208ENSMUST00000180829 Upf2A2AT37 1269 aaKnown RBP14.6□□□□□ -0.07
Ccdc136-208ENSMUST00000180829 Smarca4Q3TKT4 1613 aaKnown RBP14.59□□□□□ -0.07
Ccdc136-208ENSMUST00000180829 Cttnbp2B9EJA2 1648 aa14.59□□□□□ -0.07
Ccdc136-208ENSMUST00000180829 P3h3Q8CG70 732 aa14.59□□□□□ -0.07
Ccdc136-208ENSMUST00000180829 Slc4a3P16283 1227 aa14.58□□□□□ -0.08
Ccdc136-208ENSMUST00000180829 Fgd1P52734 960 aa14.57□□□□□ -0.08
Ccdc136-208ENSMUST00000180829 Wdr43Q6ZQL4 677 aaKnown RBP14.57□□□□□ -0.08
Ccdc136-208ENSMUST00000180829 Pknox2Q8BG99 474 aa14.57□□□□□ -0.08
Ccdc136-208ENSMUST00000180829 Clip1Q922J3 1391 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms