RNA–Protein interactions for RNA: ENSMUST00000179693.1

Ctcfl-202, Transcript of Transcriptional repressor CTCFL, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ctcfl, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcfl-202ENSMUST00000179693 Gm35339A0A140LHH9 1649 aa20.68■□□□□ 0.9
Ctcfl-202ENSMUST00000179693 NischQ80TM9 1593 aa20.39■□□□□ 0.85
Ctcfl-202ENSMUST00000179693 Abcc9P70170 1546 aa19.78■□□□□ 0.76
Ctcfl-202ENSMUST00000179693 Abcc8B2RUS7 1588 aa19.67■□□□□ 0.74
Ctcfl-202ENSMUST00000179693 Rhox8Q6VSS7 320 aa19.36■□□□□ 0.69
Ctcfl-202ENSMUST00000179693 ScribQ80U72 1612 aa18.89■□□□□ 0.61
Ctcfl-202ENSMUST00000179693 Ehmt2Q9Z148 1263 aaKnown RBP18.6■□□□□ 0.57
Ctcfl-202ENSMUST00000179693 Rpgrip1Q9EPQ2 1331 aa18.35■□□□□ 0.53
Ctcfl-202ENSMUST00000179693 NacadQ5SWP3 1504 aa18.3■□□□□ 0.52
Ctcfl-202ENSMUST00000179693 Ccdc180J3QNE4 1664 aa18.3■□□□□ 0.52
Ctcfl-202ENSMUST00000179693 Kdm5dQ62240 1548 aa18.29■□□□□ 0.52
Ctcfl-202ENSMUST00000179693 Rtl1Q7M732 1744 aa18.28■□□□□ 0.52
Ctcfl-202ENSMUST00000179693 Dcaf1Q80TR8 1506 aa18.2■□□□□ 0.5
Ctcfl-202ENSMUST00000179693 Acin1Q9JIX8 1338 aaKnown RBP18.15■□□□□ 0.5
Ctcfl-202ENSMUST00000179693 Ccdc136Q3TVA9 1136 aa17.95■□□□□ 0.46
Ctcfl-202ENSMUST00000179693 Sycp2Q9CUU3 1500 aa17.94■□□□□ 0.46
Ctcfl-202ENSMUST00000179693 Pcgf6Q99NA9 353 aa17.88■□□□□ 0.45
Ctcfl-202ENSMUST00000179693 Zcchc6Q5BLK4 1491 aaKnown RBP17.87■□□□□ 0.45
Ctcfl-202ENSMUST00000179693 Rb1cc1Q9ESK9 1588 aa17.8■□□□□ 0.44
Ctcfl-202ENSMUST00000179693 BicraF8VPZ9 1578 aa17.66■□□□□ 0.42
Ctcfl-202ENSMUST00000179693 HrcG5E8J6 738 aa17.59■□□□□ 0.41
Ctcfl-202ENSMUST00000179693 Supt5hO55201 1082 aaKnown RBP17.57■□□□□ 0.4
Ctcfl-202ENSMUST00000179693 Baz1aO88379 1555 aa17.57■□□□□ 0.4
Ctcfl-202ENSMUST00000179693 Trim41Q5NCC3 630 aa17.54■□□□□ 0.4
Ctcfl-202ENSMUST00000179693 Crybg2B7ZCC2 1516 aa17.49■□□□□ 0.39
Ctcfl-202ENSMUST00000179693 Zeb1Q64318 1117 aa17.36■□□□□ 0.37
Ctcfl-202ENSMUST00000179693 Neurod1Q60867 357 aa17.27■□□□□ 0.35
Ctcfl-202ENSMUST00000179693 Gab3Q8BSM5 595 aa17.25■□□□□ 0.35
Ctcfl-202ENSMUST00000179693 Pds5bQ4VA53 1446 aaKnown RBP17.12■□□□□ 0.33
Ctcfl-202ENSMUST00000179693 Smarca2Q6DIC0 1577 aa17.08■□□□□ 0.32
Ctcfl-202ENSMUST00000179693 Cngb1E1AZ71 1325 aa17.07■□□□□ 0.32
Ctcfl-202ENSMUST00000179693 Atad2bE9Q166 1460 aaKnown RBP16.99■□□□□ 0.31
Ctcfl-202ENSMUST00000179693 Chic1Q8CBW7 227 aa16.98■□□□□ 0.31
Ctcfl-202ENSMUST00000179693 Thoc2B1AZI6 1594 aaKnown RBP16.95■□□□□ 0.3
Ctcfl-202ENSMUST00000179693 Sall2Q9QX96 1004 aa16.94■□□□□ 0.3
Ctcfl-202ENSMUST00000179693 Smarca4Q3TKT4 1613 aaKnown RBP16.94■□□□□ 0.3
Ctcfl-202ENSMUST00000179693 Mier1Q5UAK0 511 aa16.93■□□□□ 0.3
Ctcfl-202ENSMUST00000179693 Cep164Q5DU05 1446 aa16.93■□□□□ 0.3
Ctcfl-202ENSMUST00000179693 Ppargc1bQ8VHJ7 1014 aa16.89■□□□□ 0.3
Ctcfl-202ENSMUST00000179693 Cecr2E9Q2Z1 1453 aa16.89■□□□□ 0.29
Ctcfl-202ENSMUST00000179693 Iqgap2Q3UQ44 1575 aa16.82■□□□□ 0.28
Ctcfl-202ENSMUST00000179693 Wdr66E9Q743 1299 aa16.8■□□□□ 0.28
Ctcfl-202ENSMUST00000179693 Dnajc5bQ9CQ94 199 aa16.8■□□□□ 0.28
Ctcfl-202ENSMUST00000179693 Csrnp3P59055 597 aa16.78■□□□□ 0.28
Ctcfl-202ENSMUST00000179693 Ercc6F8VPZ5 1481 aa16.77■□□□□ 0.28
Ctcfl-202ENSMUST00000179693 Rsf1E9PWW9 1441 aaKnown RBP16.76■□□□□ 0.27
Ctcfl-202ENSMUST00000179693 NefmP08553 848 aa16.76■□□□□ 0.27
Ctcfl-202ENSMUST00000179693 UbtfP25976 765 aaKnown RBP16.72■□□□□ 0.27
Ctcfl-202ENSMUST00000179693 Las1lA2BE28 776 aaKnown RBP16.71■□□□□ 0.27
Ctcfl-202ENSMUST00000179693 1700123L14RikQ3V2K7 440 aa16.71■□□□□ 0.27
Ctcfl-202ENSMUST00000179693 Aebp2Q9Z248 504 aaKnown RBP16.66■□□□□ 0.26
Ctcfl-202ENSMUST00000179693 Wdr62Q3U3T8 1523 aa16.65■□□□□ 0.26
Ctcfl-202ENSMUST00000179693 Cc2d2aQ8CFW7 1633 aa16.65■□□□□ 0.26
Ctcfl-202ENSMUST00000179693 Gm38655A0A286YDK6 273 aa16.63■□□□□ 0.25
Ctcfl-202ENSMUST00000179693 Ccdc88bQ4QRL3 1481 aa16.6■□□□□ 0.25
Ctcfl-202ENSMUST00000179693 Frmpd1A2AKB4 1549 aa16.6■□□□□ 0.25
Ctcfl-202ENSMUST00000179693 Fam135aQ6NS59 1506 aa16.6■□□□□ 0.25
Ctcfl-202ENSMUST00000179693 Cttnbp2B9EJA2 1648 aa16.59■□□□□ 0.25
Ctcfl-202ENSMUST00000179693 Brd4Q9ESU6 1400 aaKnown RBP16.57■□□□□ 0.24
Ctcfl-202ENSMUST00000179693 CftrP26361 1476 aa16.56■□□□□ 0.24
Ctcfl-202ENSMUST00000179693 Synj1Q8CHC4 1574 aa16.56■□□□□ 0.24
Ctcfl-202ENSMUST00000179693 Esf1Q3V1V3 845 aaKnown RBP16.55■□□□□ 0.24
Ctcfl-202ENSMUST00000179693 Anks4bQ8K3X6 423 aa16.54■□□□□ 0.24
Ctcfl-202ENSMUST00000179693 Myt1lP97500 1187 aa16.48■□□□□ 0.23
Ctcfl-202ENSMUST00000179693 Nop58Q6DFW4 536 aaKnown RBP16.46■□□□□ 0.23
Ctcfl-202ENSMUST00000179693 Phldb1Q6PDH0 1371 aaKnown RBP16.46■□□□□ 0.23
Ctcfl-202ENSMUST00000179693 Cdk11bP24788 784 aaKnown RBP16.46■□□□□ 0.22
Ctcfl-202ENSMUST00000179693 Baz1bQ9Z277 1479 aa16.45■□□□□ 0.22
Ctcfl-202ENSMUST00000179693 Unc13aQ4KUS2 1712 aa16.44■□□□□ 0.22
Ctcfl-202ENSMUST00000179693 Ube2uB1AUC4 352 aa16.33■□□□□ 0.21
Ctcfl-202ENSMUST00000179693 Golga3P55937 1487 aa16.31■□□□□ 0.2
Ctcfl-202ENSMUST00000179693 ClspnQ80YR7 1315 aa16.3■□□□□ 0.2
Ctcfl-202ENSMUST00000179693 Ubl4bQ9CQ84 188 aa16.24■□□□□ 0.19
Ctcfl-202ENSMUST00000179693 Plekhg3Q4VAC9 1341 aa16.24■□□□□ 0.19
Ctcfl-202ENSMUST00000179693 TonslQ6NZL6 1363 aa16.22■□□□□ 0.19
Ctcfl-202ENSMUST00000179693 CenpbP27790 599 aa16.21■□□□□ 0.19
Ctcfl-202ENSMUST00000179693 DiexfQ8BTT6 772 aaKnown RBP16.2■□□□□ 0.18
Ctcfl-202ENSMUST00000179693 Mrc2Q64449 1479 aa16.18■□□□□ 0.18
Ctcfl-202ENSMUST00000179693 Aplp2Q06335 707 aa16.18■□□□□ 0.18
Ctcfl-202ENSMUST00000179693 Npm2Q80W85 207 aa16.17■□□□□ 0.18
Ctcfl-202ENSMUST00000179693 Mapk8ip2Q9ERE9 830 aa16.17■□□□□ 0.18
Ctcfl-202ENSMUST00000179693 Eid3Q3V124 375 aa16.16■□□□□ 0.18
Ctcfl-202ENSMUST00000179693 Ap3b1Q9Z1T1 1105 aa16.12■□□□□ 0.17
Ctcfl-202ENSMUST00000179693 SafbD3YXK2 937 aaKnown RBP16.1■□□□□ 0.17
Ctcfl-202ENSMUST00000179693 Lamc3Q9R0B6 1581 aa16.08■□□□□ 0.16
Ctcfl-202ENSMUST00000179693 Top2bQ64511 1612 aa16.06■□□□□ 0.16
Ctcfl-202ENSMUST00000179693 Hnrnpul2Q00PI9 745 aaKnown RBP16.03■□□□□ 0.16
Ctcfl-202ENSMUST00000179693 Kif15Q6P9L6 1387 aa16.03■□□□□ 0.16
Ctcfl-202ENSMUST00000179693 Cux2P70298 1426 aa15.99■□□□□ 0.15
Ctcfl-202ENSMUST00000179693 TnnQ80Z71 1560 aa15.97■□□□□ 0.15
Ctcfl-202ENSMUST00000179693 Clip1Q922J3 1391 aa15.96■□□□□ 0.14
Ctcfl-202ENSMUST00000179693 Fam71e1A1L3C1 212 aa15.95■□□□□ 0.14
Ctcfl-202ENSMUST00000179693 Rapgef2Q8CHG7 1496 aa15.94■□□□□ 0.14
Ctcfl-202ENSMUST00000179693 Cep162Q6ZQ06 1403 aa15.92■□□□□ 0.14
Ctcfl-202ENSMUST00000179693 Kif21aQ9QXL2 1672 aa15.88■□□□□ 0.13
Ctcfl-202ENSMUST00000179693 Fmn1Q05860 1466 aa15.85■□□□□ 0.13
Ctcfl-202ENSMUST00000179693 Ttbk1Q6PCN3 1308 aa15.84■□□□□ 0.13
Ctcfl-202ENSMUST00000179693 Lrriq1Q0P5X1 1673 aa15.83■□□□□ 0.13
Ctcfl-202ENSMUST00000179693 Il27Q8K3I6 234 aa15.82■□□□□ 0.12
Ctcfl-202ENSMUST00000179693 Myt1Q8CFC2 1127 aa15.8■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms