RNA–Protein interactions for RNA: ENSMUST00000168321.7

Sema6c-213, Transcript of Semaphorin-6C, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sema6c, Length 3,553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6c-213ENSMUST00000168321 NischQ80TM9 1593 aa28.95■■■□□ 2.23
Sema6c-213ENSMUST00000168321 Gm35339A0A140LHH9 1649 aa28.34■■■□□ 2.13
Sema6c-213ENSMUST00000168321 Abcc9P70170 1546 aa28.08■■■□□ 2.09
Sema6c-213ENSMUST00000168321 Abcc8B2RUS7 1588 aa27.47■■□□□ 1.99
Sema6c-213ENSMUST00000168321 Rhox8Q6VSS7 320 aa27.02■■□□□ 1.92
Sema6c-213ENSMUST00000168321 Rtl1Q7M732 1744 aa26.41■■□□□ 1.82
Sema6c-213ENSMUST00000168321 Ccdc180J3QNE4 1664 aa25.97■■□□□ 1.75
Sema6c-213ENSMUST00000168321 ScribQ80U72 1612 aa25.59■■□□□ 1.69
Sema6c-213ENSMUST00000168321 Dcaf1Q80TR8 1506 aa25.57■■□□□ 1.68
Sema6c-213ENSMUST00000168321 Zcchc6Q5BLK4 1491 aaKnown RBP25.51■■□□□ 1.67
Sema6c-213ENSMUST00000168321 Rb1cc1Q9ESK9 1588 aa25.37■■□□□ 1.65
Sema6c-213ENSMUST00000168321 Kdm5dQ62240 1548 aa25.15■■□□□ 1.62
Sema6c-213ENSMUST00000168321 Baz1aO88379 1555 aa25.06■■□□□ 1.6
Sema6c-213ENSMUST00000168321 Ccdc136Q3TVA9 1136 aa25.06■■□□□ 1.6
Sema6c-213ENSMUST00000168321 NacadQ5SWP3 1504 aa24.93■■□□□ 1.58
Sema6c-213ENSMUST00000168321 HrcG5E8J6 738 aa24.82■■□□□ 1.56
Sema6c-213ENSMUST00000168321 Rpgrip1Q9EPQ2 1331 aa24.55■■□□□ 1.52
Sema6c-213ENSMUST00000168321 Crybg2B7ZCC2 1516 aa24.55■■□□□ 1.52
Sema6c-213ENSMUST00000168321 Smarca2Q6DIC0 1577 aa24.48■■□□□ 1.51
Sema6c-213ENSMUST00000168321 Trim41Q5NCC3 630 aa24.47■■□□□ 1.51
Sema6c-213ENSMUST00000168321 Sycp2Q9CUU3 1500 aa24.39■■□□□ 1.49
Sema6c-213ENSMUST00000168321 Ehmt2Q9Z148 1263 aaKnown RBP24.36■■□□□ 1.49
Sema6c-213ENSMUST00000168321 Acin1Q9JIX8 1338 aaKnown RBP24.27■■□□□ 1.48
Sema6c-213ENSMUST00000168321 Cep164Q5DU05 1446 aa24.07■■□□□ 1.44
Sema6c-213ENSMUST00000168321 Cngb1E1AZ71 1325 aa23.96■■□□□ 1.43
Sema6c-213ENSMUST00000168321 Brd4Q9ESU6 1400 aaKnown RBP23.96■■□□□ 1.43
Sema6c-213ENSMUST00000168321 Cecr2E9Q2Z1 1453 aa23.95■■□□□ 1.43
Sema6c-213ENSMUST00000168321 BicraF8VPZ9 1578 aa23.84■■□□□ 1.41
Sema6c-213ENSMUST00000168321 Chic1Q8CBW7 227 aa23.82■■□□□ 1.4
Sema6c-213ENSMUST00000168321 Rsf1E9PWW9 1441 aaKnown RBP23.8■■□□□ 1.4
Sema6c-213ENSMUST00000168321 Synj1Q8CHC4 1574 aa23.74■■□□□ 1.39
Sema6c-213ENSMUST00000168321 Golga3P55937 1487 aa23.72■■□□□ 1.39
Sema6c-213ENSMUST00000168321 Gab3Q8BSM5 595 aa23.7■■□□□ 1.38
Sema6c-213ENSMUST00000168321 Ccdc88bQ4QRL3 1481 aa23.65■■□□□ 1.38
Sema6c-213ENSMUST00000168321 Esf1Q3V1V3 845 aaKnown RBP23.61■■□□□ 1.37
Sema6c-213ENSMUST00000168321 CftrP26361 1476 aa23.59■■□□□ 1.37
Sema6c-213ENSMUST00000168321 Cttnbp2B9EJA2 1648 aa23.43■■□□□ 1.34
Sema6c-213ENSMUST00000168321 Top2bQ64511 1612 aa23.38■■□□□ 1.33
Sema6c-213ENSMUST00000168321 Smarca4Q3TKT4 1613 aaKnown RBP23.35■■□□□ 1.33
Sema6c-213ENSMUST00000168321 Pcgf6Q99NA9 353 aa23.25■■□□□ 1.31
Sema6c-213ENSMUST00000168321 Cc2d2aQ8CFW7 1633 aa23.2■■□□□ 1.3
Sema6c-213ENSMUST00000168321 Fmn1Q05860 1466 aa23.07■■□□□ 1.28
Sema6c-213ENSMUST00000168321 Iqgap2Q3UQ44 1575 aa23.04■■□□□ 1.28
Sema6c-213ENSMUST00000168321 Mier1Q5UAK0 511 aa23.02■■□□□ 1.28
Sema6c-213ENSMUST00000168321 Rapgef2Q8CHG7 1496 aa22.98■■□□□ 1.27
Sema6c-213ENSMUST00000168321 Top2aQ01320 1528 aaKnown RBP22.95■■□□□ 1.27
Sema6c-213ENSMUST00000168321 Supt5hO55201 1082 aaKnown RBP22.95■■□□□ 1.26
Sema6c-213ENSMUST00000168321 NefmP08553 848 aa22.92■■□□□ 1.26
Sema6c-213ENSMUST00000168321 Atad2bE9Q166 1460 aaKnown RBP22.91■■□□□ 1.26
Sema6c-213ENSMUST00000168321 Myt1lP97500 1187 aa22.85■■□□□ 1.25
Sema6c-213ENSMUST00000168321 Zeb1Q64318 1117 aa22.83■■□□□ 1.25
Sema6c-213ENSMUST00000168321 Cep162Q6ZQ06 1403 aa22.82■■□□□ 1.24
Sema6c-213ENSMUST00000168321 Pds5bQ4VA53 1446 aaKnown RBP22.8■■□□□ 1.24
Sema6c-213ENSMUST00000168321 UbtfP25976 765 aaKnown RBP22.79■■□□□ 1.24
Sema6c-213ENSMUST00000168321 Npm2Q80W85 207 aa22.79■■□□□ 1.24
Sema6c-213ENSMUST00000168321 TnnQ80Z71 1560 aa22.61■■□□□ 1.21
Sema6c-213ENSMUST00000168321 Frmpd1A2AKB4 1549 aa22.6■■□□□ 1.21
Sema6c-213ENSMUST00000168321 Wdr62Q3U3T8 1523 aa22.55■■□□□ 1.2
Sema6c-213ENSMUST00000168321 Clip1Q922J3 1391 aa22.54■■□□□ 1.2
Sema6c-213ENSMUST00000168321 Eif4g1Q6NZJ6 1600 aaKnown RBP22.53■■□□□ 1.2
Sema6c-213ENSMUST00000168321 Il27Q8K3I6 234 aa22.49■■□□□ 1.19
Sema6c-213ENSMUST00000168321 Plekhg3Q4VAC9 1341 aa22.46■■□□□ 1.19
Sema6c-213ENSMUST00000168321 Kif15Q6P9L6 1387 aa22.45■■□□□ 1.18
Sema6c-213ENSMUST00000168321 Lamc3Q9R0B6 1581 aa22.44■■□□□ 1.18
Sema6c-213ENSMUST00000168321 Sall2Q9QX96 1004 aa22.43■■□□□ 1.18
Sema6c-213ENSMUST00000168321 PtprkP35822 1457 aa22.42■■□□□ 1.18
Sema6c-213ENSMUST00000168321 Ercc6F8VPZ5 1481 aa22.42■■□□□ 1.18
Sema6c-213ENSMUST00000168321 Arhgap35Q91YM2 1499 aa22.41■■□□□ 1.18
Sema6c-213ENSMUST00000168321 Las1lA2BE28 776 aaKnown RBP22.37■■□□□ 1.17
Sema6c-213ENSMUST00000168321 NrkQ9R0G8 1455 aa22.36■■□□□ 1.17
Sema6c-213ENSMUST00000168321 Unc13aQ4KUS2 1712 aa22.3■■□□□ 1.16
Sema6c-213ENSMUST00000168321 Camsap1A2AHC3 1581 aa22.29■■□□□ 1.16
Sema6c-213ENSMUST00000168321 Shroom4Q1W617 1475 aa22.28■■□□□ 1.16
Sema6c-213ENSMUST00000168321 Eea1Q8BL66 1411 aa22.27■■□□□ 1.16
Sema6c-213ENSMUST00000168321 Wdr66E9Q743 1299 aa22.26■■□□□ 1.15
Sema6c-213ENSMUST00000168321 Neurod1Q60867 357 aa22.25■■□□□ 1.15
Sema6c-213ENSMUST00000168321 Ap3b1Q9Z1T1 1105 aa22.25■■□□□ 1.15
Sema6c-213ENSMUST00000168321 Aebp2Q9Z248 504 aaKnown RBP22.22■■□□□ 1.15
Sema6c-213ENSMUST00000168321 Arap1Q4LDD4 1452 aa22.22■■□□□ 1.15
Sema6c-213ENSMUST00000168321 Ccdc18Q640L5 1455 aa22.21■■□□□ 1.15
Sema6c-213ENSMUST00000168321 Ncapd3Q6ZQK0 1506 aa22.2■■□□□ 1.14
Sema6c-213ENSMUST00000168321 Setd5Q5XJV7 1441 aa22.2■■□□□ 1.14
Sema6c-213ENSMUST00000168321 Map3k1P53349 1493 aa22.16■■□□□ 1.14
Sema6c-213ENSMUST00000168321 Grin2bQ01097 1482 aa22.16■■□□□ 1.14
Sema6c-213ENSMUST00000168321 TonslQ6NZL6 1363 aa22.15■■□□□ 1.14
Sema6c-213ENSMUST00000168321 Arhgef5E9Q7D5 1581 aa22.12■■□□□ 1.13
Sema6c-213ENSMUST00000168321 Phldb1Q6PDH0 1371 aaKnown RBP22.08■■□□□ 1.13
Sema6c-213ENSMUST00000168321 Mroh2bQ7M6Y6 1581 aa22.07■■□□□ 1.12
Sema6c-213ENSMUST00000168321 Baz1bQ9Z277 1479 aa22.06■■□□□ 1.12
Sema6c-213ENSMUST00000168321 ClspnQ80YR7 1315 aa22.05■■□□□ 1.12
Sema6c-213ENSMUST00000168321 Cux2P70298 1426 aa22.04■■□□□ 1.12
Sema6c-213ENSMUST00000168321 Ubl4bQ9CQ84 188 aa22.03■■□□□ 1.12
Sema6c-213ENSMUST00000168321 Npm1Q61937 292 aaKnown RBP22.02■■□□□ 1.12
Sema6c-213ENSMUST00000168321 Ppargc1bQ8VHJ7 1014 aa21.99■■□□□ 1.11
Sema6c-213ENSMUST00000168321 Tiam1Q60610 1591 aa21.97■■□□□ 1.11
Sema6c-213ENSMUST00000168321 Thoc2B1AZI6 1594 aaKnown RBP21.95■■□□□ 1.1
Sema6c-213ENSMUST00000168321 Ankrd26Q811D2 1581 aa21.94■■□□□ 1.1
Sema6c-213ENSMUST00000168321 BlmO88700 1416 aa21.94■■□□□ 1.1
Sema6c-213ENSMUST00000168321 Naip1Q9QWK5 1403 aa21.93■■□□□ 1.1
Sema6c-213ENSMUST00000168321 AqrQ8CFQ3 1481 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms