RNA–Protein interactions for RNA: ENSMUST00000147044.3

Trim3-205, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-205ENSMUST00000147044 NischQ80TM9 1593 aa29.61■■■□□ 2.33
Trim3-205ENSMUST00000147044 Gm35339A0A140LHH9 1649 aa28.72■■■□□ 2.19
Trim3-205ENSMUST00000147044 Abcc9P70170 1546 aa28.53■■■□□ 2.16
Trim3-205ENSMUST00000147044 Abcc8B2RUS7 1588 aa28.14■■■□□ 2.09
Trim3-205ENSMUST00000147044 Rhox8Q6VSS7 320 aa27.87■■■□□ 2.05
Trim3-205ENSMUST00000147044 ScribQ80U72 1612 aa26.55■■□□□ 1.84
Trim3-205ENSMUST00000147044 Ccdc136Q3TVA9 1136 aa26■■□□□ 1.75
Trim3-205ENSMUST00000147044 Kdm5dQ62240 1548 aa26■■□□□ 1.75
Trim3-205ENSMUST00000147044 Rtl1Q7M732 1744 aa25.95■■□□□ 1.74
Trim3-205ENSMUST00000147044 Rb1cc1Q9ESK9 1588 aa25.93■■□□□ 1.74
Trim3-205ENSMUST00000147044 Dcaf1Q80TR8 1506 aa25.67■■□□□ 1.7
Trim3-205ENSMUST00000147044 NacadQ5SWP3 1504 aa25.66■■□□□ 1.7
Trim3-205ENSMUST00000147044 Zcchc6Q5BLK4 1491 aaKnown RBP25.53■■□□□ 1.68
Trim3-205ENSMUST00000147044 Ccdc180J3QNE4 1664 aa25.49■■□□□ 1.67
Trim3-205ENSMUST00000147044 Baz1aO88379 1555 aa25.44■■□□□ 1.66
Trim3-205ENSMUST00000147044 Sycp2Q9CUU3 1500 aa25.16■■□□□ 1.62
Trim3-205ENSMUST00000147044 Ehmt2Q9Z148 1263 aaKnown RBP24.83■■□□□ 1.57
Trim3-205ENSMUST00000147044 Trim41Q5NCC3 630 aa24.82■■□□□ 1.56
Trim3-205ENSMUST00000147044 Cecr2E9Q2Z1 1453 aa24.81■■□□□ 1.56
Trim3-205ENSMUST00000147044 Smarca2Q6DIC0 1577 aa24.81■■□□□ 1.56
Trim3-205ENSMUST00000147044 Cngb1E1AZ71 1325 aa24.8■■□□□ 1.56
Trim3-205ENSMUST00000147044 BicraF8VPZ9 1578 aa24.78■■□□□ 1.56
Trim3-205ENSMUST00000147044 Crybg2B7ZCC2 1516 aa24.67■■□□□ 1.54
Trim3-205ENSMUST00000147044 Esf1Q3V1V3 845 aaKnown RBP24.58■■□□□ 1.53
Trim3-205ENSMUST00000147044 Gab3Q8BSM5 595 aa24.48■■□□□ 1.51
Trim3-205ENSMUST00000147044 HrcG5E8J6 738 aa24.44■■□□□ 1.5
Trim3-205ENSMUST00000147044 Chic1Q8CBW7 227 aa24.43■■□□□ 1.5
Trim3-205ENSMUST00000147044 Synj1Q8CHC4 1574 aa24.32■■□□□ 1.48
Trim3-205ENSMUST00000147044 Brd4Q9ESU6 1400 aaKnown RBP24.31■■□□□ 1.48
Trim3-205ENSMUST00000147044 Rsf1E9PWW9 1441 aaKnown RBP24.15■■□□□ 1.46
Trim3-205ENSMUST00000147044 CftrP26361 1476 aa24.14■■□□□ 1.46
Trim3-205ENSMUST00000147044 Ccdc88bQ4QRL3 1481 aa24.11■■□□□ 1.45
Trim3-205ENSMUST00000147044 Golga3P55937 1487 aa23.99■■□□□ 1.43
Trim3-205ENSMUST00000147044 Smarca4Q3TKT4 1613 aaKnown RBP23.98■■□□□ 1.43
Trim3-205ENSMUST00000147044 Cep164Q5DU05 1446 aa23.92■■□□□ 1.42
Trim3-205ENSMUST00000147044 Rpgrip1Q9EPQ2 1331 aa23.92■■□□□ 1.42
Trim3-205ENSMUST00000147044 Cttnbp2B9EJA2 1648 aa23.8■■□□□ 1.4
Trim3-205ENSMUST00000147044 Iqgap2Q3UQ44 1575 aa23.8■■□□□ 1.4
Trim3-205ENSMUST00000147044 Il27Q8K3I6 234 aa23.76■■□□□ 1.39
Trim3-205ENSMUST00000147044 Atad2bE9Q166 1460 aaKnown RBP23.69■■□□□ 1.38
Trim3-205ENSMUST00000147044 Cc2d2aQ8CFW7 1633 aa23.69■■□□□ 1.38
Trim3-205ENSMUST00000147044 Acin1Q9JIX8 1338 aaKnown RBP23.67■■□□□ 1.38
Trim3-205ENSMUST00000147044 Myt1lP97500 1187 aa23.66■■□□□ 1.38
Trim3-205ENSMUST00000147044 Pds5bQ4VA53 1446 aaKnown RBP23.64■■□□□ 1.38
Trim3-205ENSMUST00000147044 Top2bQ64511 1612 aa23.56■■□□□ 1.36
Trim3-205ENSMUST00000147044 Npm2Q80W85 207 aa23.51■■□□□ 1.35
Trim3-205ENSMUST00000147044 Frmpd1A2AKB4 1549 aa23.47■■□□□ 1.35
Trim3-205ENSMUST00000147044 Kif15Q6P9L6 1387 aa23.34■■□□□ 1.33
Trim3-205ENSMUST00000147044 Fmn1Q05860 1466 aa23.32■■□□□ 1.32
Trim3-205ENSMUST00000147044 Dnajc5bQ9CQ94 199 aa23.32■■□□□ 1.32
Trim3-205ENSMUST00000147044 Ercc6F8VPZ5 1481 aa23.32■■□□□ 1.32
Trim3-205ENSMUST00000147044 Wdr62Q3U3T8 1523 aa23.3■■□□□ 1.32
Trim3-205ENSMUST00000147044 Ubl4bQ9CQ84 188 aa23.27■■□□□ 1.32
Trim3-205ENSMUST00000147044 Zeb1Q64318 1117 aa23.2■■□□□ 1.3
Trim3-205ENSMUST00000147044 Rapgef2Q8CHG7 1496 aa23.2■■□□□ 1.3
Trim3-205ENSMUST00000147044 UbtfP25976 765 aaKnown RBP23.18■■□□□ 1.3
Trim3-205ENSMUST00000147044 Ap3b1Q9Z1T1 1105 aa23.16■■□□□ 1.3
Trim3-205ENSMUST00000147044 Top2aQ01320 1528 aaKnown RBP23.14■■□□□ 1.3
Trim3-205ENSMUST00000147044 Pcgf6Q99NA9 353 aa23.08■■□□□ 1.29
Trim3-205ENSMUST00000147044 PtprkP35822 1457 aa23.07■■□□□ 1.28
Trim3-205ENSMUST00000147044 Unc13aQ4KUS2 1712 aa23.07■■□□□ 1.28
Trim3-205ENSMUST00000147044 Plekhg3Q4VAC9 1341 aa23.05■■□□□ 1.28
Trim3-205ENSMUST00000147044 Cep162Q6ZQ06 1403 aa23.04■■□□□ 1.28
Trim3-205ENSMUST00000147044 Npm1Q61937 292 aaKnown RBP23.01■■□□□ 1.27
Trim3-205ENSMUST00000147044 Phldb1Q6PDH0 1371 aaKnown RBP22.97■■□□□ 1.27
Trim3-205ENSMUST00000147044 Mier1Q5UAK0 511 aa22.97■■□□□ 1.27
Trim3-205ENSMUST00000147044 Cux2P70298 1426 aa22.97■■□□□ 1.27
Trim3-205ENSMUST00000147044 Thoc2B1AZI6 1594 aaKnown RBP22.92■■□□□ 1.26
Trim3-205ENSMUST00000147044 Lamc3Q9R0B6 1581 aa22.89■■□□□ 1.25
Trim3-205ENSMUST00000147044 TnnQ80Z71 1560 aa22.88■■□□□ 1.25
Trim3-205ENSMUST00000147044 Clip1Q922J3 1391 aa22.81■■□□□ 1.24
Trim3-205ENSMUST00000147044 Camsap1A2AHC3 1581 aa22.8■■□□□ 1.24
Trim3-205ENSMUST00000147044 Ccdc18Q640L5 1455 aa22.79■■□□□ 1.24
Trim3-205ENSMUST00000147044 Arhgap35Q91YM2 1499 aa22.74■■□□□ 1.23
Trim3-205ENSMUST00000147044 Lmod2Q3UHZ5 550 aa22.67■■□□□ 1.22
Trim3-205ENSMUST00000147044 Grin2bQ01097 1482 aa22.67■■□□□ 1.22
Trim3-205ENSMUST00000147044 Baz1bQ9Z277 1479 aa22.65■■□□□ 1.22
Trim3-205ENSMUST00000147044 Shroom4Q1W617 1475 aa22.63■■□□□ 1.21
Trim3-205ENSMUST00000147044 LrpprcQ6PB66 1392 aaKnown RBP22.62■■□□□ 1.21
Trim3-205ENSMUST00000147044 Setd5Q5XJV7 1441 aa22.58■■□□□ 1.21
Trim3-205ENSMUST00000147044 Fam135aQ6NS59 1506 aa22.57■■□□□ 1.2
Trim3-205ENSMUST00000147044 Dhx29Q6PGC1 1365 aaKnown RBP22.55■■□□□ 1.2
Trim3-205ENSMUST00000147044 NrkQ9R0G8 1455 aa22.54■■□□□ 1.2
Trim3-205ENSMUST00000147044 Rad54l2Q99NG0 1466 aa22.52■■□□□ 1.2
Trim3-205ENSMUST00000147044 Eif4g1Q6NZJ6 1600 aaKnown RBP22.52■■□□□ 1.2
Trim3-205ENSMUST00000147044 Duox2A2AQ99 1517 aa22.51■■□□□ 1.19
Trim3-205ENSMUST00000147044 Arap1Q4LDD4 1452 aa22.48■■□□□ 1.19
Trim3-205ENSMUST00000147044 Ppargc1bQ8VHJ7 1014 aa22.47■■□□□ 1.19
Trim3-205ENSMUST00000147044 Supt5hO55201 1082 aaKnown RBP22.47■■□□□ 1.19
Trim3-205ENSMUST00000147044 PogzQ8BZH4 1409 aaKnown RBP22.45■■□□□ 1.18
Trim3-205ENSMUST00000147044 Eea1Q8BL66 1411 aa22.45■■□□□ 1.18
Trim3-205ENSMUST00000147044 NefmP08553 848 aa22.44■■□□□ 1.18
Trim3-205ENSMUST00000147044 Mroh2bQ7M6Y6 1581 aa22.43■■□□□ 1.18
Trim3-205ENSMUST00000147044 AqrQ8CFQ3 1481 aaKnown RBP22.38■■□□□ 1.17
Trim3-205ENSMUST00000147044 Neurod1Q60867 357 aa22.38■■□□□ 1.17
Trim3-205ENSMUST00000147044 Eid3Q3V124 375 aa22.37■■□□□ 1.17
Trim3-205ENSMUST00000147044 Mrc2Q64449 1479 aa22.36■■□□□ 1.17
Trim3-205ENSMUST00000147044 Samd9lQ69Z37 1561 aa22.36■■□□□ 1.17
Trim3-205ENSMUST00000147044 Kif21aQ9QXL2 1672 aa22.35■■□□□ 1.17
Trim3-205ENSMUST00000147044 BlmO88700 1416 aa22.35■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms