RNA–Protein interactions for RNA: ENSMUST00000137771.1

Ldb1-205, Transcript of LIM domain-binding protein 1, mousemouse

TSL 5 BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-205ENSMUST00000137771 NischQ80TM9 1593 aa32.65■■■□□ 2.82
Ldb1-205ENSMUST00000137771 Gm35339A0A140LHH9 1649 aa32.31■■■□□ 2.76
Ldb1-205ENSMUST00000137771 Abcc9P70170 1546 aa31.79■■■□□ 2.68
Ldb1-205ENSMUST00000137771 Abcc8B2RUS7 1588 aa31.02■■■□□ 2.56
Ldb1-205ENSMUST00000137771 Rtl1Q7M732 1744 aa30.27■■■□□ 2.44
Ldb1-205ENSMUST00000137771 Rhox8Q6VSS7 320 aa29.95■■■□□ 2.39
Ldb1-205ENSMUST00000137771 Ccdc180J3QNE4 1664 aa29.58■■■□□ 2.33
Ldb1-205ENSMUST00000137771 Dcaf1Q80TR8 1506 aa29.2■■■□□ 2.27
Ldb1-205ENSMUST00000137771 Zcchc6Q5BLK4 1491 aaKnown RBP28.85■■■□□ 2.21
Ldb1-205ENSMUST00000137771 ScribQ80U72 1612 aa28.81■■■□□ 2.2
Ldb1-205ENSMUST00000137771 Rb1cc1Q9ESK9 1588 aa28.61■■■□□ 2.17
Ldb1-205ENSMUST00000137771 Baz1aO88379 1555 aa28.36■■■□□ 2.13
Ldb1-205ENSMUST00000137771 Kdm5dQ62240 1548 aa28.31■■■□□ 2.12
Ldb1-205ENSMUST00000137771 NacadQ5SWP3 1504 aa28.18■■■□□ 2.1
Ldb1-205ENSMUST00000137771 HrcG5E8J6 738 aa28.08■■■□□ 2.09
Ldb1-205ENSMUST00000137771 Crybg2B7ZCC2 1516 aa28.02■■■□□ 2.08
Ldb1-205ENSMUST00000137771 Rpgrip1Q9EPQ2 1331 aa27.99■■■□□ 2.07
Ldb1-205ENSMUST00000137771 Smarca2Q6DIC0 1577 aa27.72■■■□□ 2.03
Ldb1-205ENSMUST00000137771 Ccdc136Q3TVA9 1136 aa27.7■■■□□ 2.03
Ldb1-205ENSMUST00000137771 Sycp2Q9CUU3 1500 aa27.53■■■□□ 2
Ldb1-205ENSMUST00000137771 Trim41Q5NCC3 630 aa27.48■■□□□ 1.99
Ldb1-205ENSMUST00000137771 Acin1Q9JIX8 1338 aaKnown RBP27.34■■□□□ 1.97
Ldb1-205ENSMUST00000137771 Cep164Q5DU05 1446 aa27.2■■□□□ 1.94
Ldb1-205ENSMUST00000137771 Brd4Q9ESU6 1400 aaKnown RBP27.06■■□□□ 1.92
Ldb1-205ENSMUST00000137771 BicraF8VPZ9 1578 aa26.83■■□□□ 1.88
Ldb1-205ENSMUST00000137771 Cecr2E9Q2Z1 1453 aa26.79■■□□□ 1.88
Ldb1-205ENSMUST00000137771 Golga3P55937 1487 aa26.74■■□□□ 1.87
Ldb1-205ENSMUST00000137771 Synj1Q8CHC4 1574 aa26.7■■□□□ 1.87
Ldb1-205ENSMUST00000137771 Ehmt2Q9Z148 1263 aaKnown RBP26.7■■□□□ 1.87
Ldb1-205ENSMUST00000137771 Rsf1E9PWW9 1441 aaKnown RBP26.66■■□□□ 1.86
Ldb1-205ENSMUST00000137771 CftrP26361 1476 aa26.57■■□□□ 1.84
Ldb1-205ENSMUST00000137771 Cngb1E1AZ71 1325 aa26.56■■□□□ 1.84
Ldb1-205ENSMUST00000137771 Cttnbp2B9EJA2 1648 aa26.54■■□□□ 1.84
Ldb1-205ENSMUST00000137771 Top2bQ64511 1612 aa26.5■■□□□ 1.83
Ldb1-205ENSMUST00000137771 Chic1Q8CBW7 227 aa26.48■■□□□ 1.83
Ldb1-205ENSMUST00000137771 Ccdc88bQ4QRL3 1481 aa26.45■■□□□ 1.82
Ldb1-205ENSMUST00000137771 Smarca4Q3TKT4 1613 aaKnown RBP26.38■■□□□ 1.81
Ldb1-205ENSMUST00000137771 Esf1Q3V1V3 845 aaKnown RBP26.22■■□□□ 1.79
Ldb1-205ENSMUST00000137771 Gab3Q8BSM5 595 aa26.15■■□□□ 1.78
Ldb1-205ENSMUST00000137771 Cc2d2aQ8CFW7 1633 aa26.09■■□□□ 1.77
Ldb1-205ENSMUST00000137771 Fmn1Q05860 1466 aa26.09■■□□□ 1.77
Ldb1-205ENSMUST00000137771 Pcgf6Q99NA9 353 aa26.03■■□□□ 1.76
Ldb1-205ENSMUST00000137771 Top2aQ01320 1528 aaKnown RBP25.96■■□□□ 1.75
Ldb1-205ENSMUST00000137771 Iqgap2Q3UQ44 1575 aa25.96■■□□□ 1.75
Ldb1-205ENSMUST00000137771 Rapgef2Q8CHG7 1496 aa25.96■■□□□ 1.75
Ldb1-205ENSMUST00000137771 NefmP08553 848 aa25.89■■□□□ 1.74
Ldb1-205ENSMUST00000137771 Atad2bE9Q166 1460 aaKnown RBP25.86■■□□□ 1.73
Ldb1-205ENSMUST00000137771 Pds5bQ4VA53 1446 aaKnown RBP25.73■■□□□ 1.71
Ldb1-205ENSMUST00000137771 Mier1Q5UAK0 511 aa25.68■■□□□ 1.7
Ldb1-205ENSMUST00000137771 TnnQ80Z71 1560 aa25.67■■□□□ 1.7
Ldb1-205ENSMUST00000137771 Cep162Q6ZQ06 1403 aa25.67■■□□□ 1.7
Ldb1-205ENSMUST00000137771 Eif4g1Q6NZJ6 1600 aaKnown RBP25.58■■□□□ 1.68
Ldb1-205ENSMUST00000137771 Supt5hO55201 1082 aaKnown RBP25.56■■□□□ 1.68
Ldb1-205ENSMUST00000137771 Wdr62Q3U3T8 1523 aa25.45■■□□□ 1.66
Ldb1-205ENSMUST00000137771 Lamc3Q9R0B6 1581 aa25.4■■□□□ 1.66
Ldb1-205ENSMUST00000137771 Frmpd1A2AKB4 1549 aa25.4■■□□□ 1.66
Ldb1-205ENSMUST00000137771 Npm2Q80W85 207 aa25.32■■□□□ 1.64
Ldb1-205ENSMUST00000137771 NrkQ9R0G8 1455 aa25.3■■□□□ 1.64
Ldb1-205ENSMUST00000137771 Zeb1Q64318 1117 aa25.28■■□□□ 1.64
Ldb1-205ENSMUST00000137771 UbtfP25976 765 aaKnown RBP25.26■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Myt1lP97500 1187 aa25.25■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Ercc6F8VPZ5 1481 aa25.24■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Clip1Q922J3 1391 aa25.24■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Arhgap35Q91YM2 1499 aa25.22■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Unc13aQ4KUS2 1712 aa25.18■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Map3k1P53349 1493 aa25.17■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Shroom4Q1W617 1475 aa25.14■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Camsap1A2AHC3 1581 aa25.14■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Ccdc18Q640L5 1455 aa25.11■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Las1lA2BE28 776 aaKnown RBP25.1■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Kif15Q6P9L6 1387 aa25.09■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Eea1Q8BL66 1411 aa25.08■■□□□ 1.61
Ldb1-205ENSMUST00000137771 PtprkP35822 1457 aa25.08■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Ncapd3Q6ZQK0 1506 aa25.05■■□□□ 1.6
Ldb1-205ENSMUST00000137771 Sall2Q9QX96 1004 aa25.01■■□□□ 1.59
Ldb1-205ENSMUST00000137771 Arhgef5E9Q7D5 1581 aa24.98■■□□□ 1.59
Ldb1-205ENSMUST00000137771 Grin2bQ01097 1482 aa24.97■■□□□ 1.59
Ldb1-205ENSMUST00000137771 Arap1Q4LDD4 1452 aa24.96■■□□□ 1.59
Ldb1-205ENSMUST00000137771 AqrQ8CFQ3 1481 aaKnown RBP24.91■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Erich3F6QRE9 1637 aa24.9■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Mroh2bQ7M6Y6 1581 aa24.9■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Plekhg3Q4VAC9 1341 aa24.9■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Setd5Q5XJV7 1441 aa24.87■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Phldb1Q6PDH0 1371 aaKnown RBP24.85■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Neurod1Q60867 357 aa24.85■■□□□ 1.57
Ldb1-205ENSMUST00000137771 TonslQ6NZL6 1363 aa24.84■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Tiam1Q60610 1591 aa24.83■■□□□ 1.57
Ldb1-205ENSMUST00000137771 ClspnQ80YR7 1315 aa24.83■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Thoc2B1AZI6 1594 aaKnown RBP24.8■■□□□ 1.56
Ldb1-205ENSMUST00000137771 Il27Q8K3I6 234 aa24.79■■□□□ 1.56
Ldb1-205ENSMUST00000137771 TchhA0A0B4J1F9 1599 aa24.77■■□□□ 1.56
Ldb1-205ENSMUST00000137771 Ankrd26Q811D2 1581 aa24.75■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Efcab5A0JP43 1406 aa24.74■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Baz1bQ9Z277 1479 aa24.73■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Kdm5bQ80Y84 1544 aa24.72■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Wdr66E9Q743 1299 aa24.71■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Aebp2Q9Z248 504 aaKnown RBP24.71■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Cux2P70298 1426 aa24.66■■□□□ 1.54
Ldb1-205ENSMUST00000137771 Naip1Q9QWK5 1403 aa24.66■■□□□ 1.54
Ldb1-205ENSMUST00000137771 Lmo7E9PYF4 1699 aaKnown RBP24.64■■□□□ 1.53
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms