RNA–Protein interactions for RNA: ENSMUST00000123572.7

Lin54-202, Transcript of Protein lin-54 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lin54, Length 4,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54-202ENSMUST00000123572 NischQ80TM9 1593 aa15.59■□□□□ 0.09
Lin54-202ENSMUST00000123572 Rhox8Q6VSS7 320 aa15.58■□□□□ 0.08
Lin54-202ENSMUST00000123572 Abcc9P70170 1546 aa14.87□□□□□ -0.03
Lin54-202ENSMUST00000123572 Gm35339A0A140LHH9 1649 aa14.72□□□□□ -0.05
Lin54-202ENSMUST00000123572 Abcc8B2RUS7 1588 aa14.62□□□□□ -0.07
Lin54-202ENSMUST00000123572 Esf1Q3V1V3 845 aaKnown RBP14.22□□□□□ -0.13
Lin54-202ENSMUST00000123572 Ccdc136Q3TVA9 1136 aa14.08□□□□□ -0.15
Lin54-202ENSMUST00000123572 Zeb1Q64318 1117 aa14.04□□□□□ -0.16
Lin54-202ENSMUST00000123572 Rtl1Q7M732 1744 aa13.97□□□□□ -0.17
Lin54-202ENSMUST00000123572 Trim41Q5NCC3 630 aa13.97□□□□□ -0.17
Lin54-202ENSMUST00000123572 Ccdc180J3QNE4 1664 aa13.82□□□□□ -0.2
Lin54-202ENSMUST00000123572 Zcchc6Q5BLK4 1491 aaKnown RBP13.77□□□□□ -0.21
Lin54-202ENSMUST00000123572 Cngb1E1AZ71 1325 aa13.75□□□□□ -0.21
Lin54-202ENSMUST00000123572 NacadQ5SWP3 1504 aa13.68□□□□□ -0.22
Lin54-202ENSMUST00000123572 Ube2uB1AUC4 352 aa13.68□□□□□ -0.22
Lin54-202ENSMUST00000123572 Rb1cc1Q9ESK9 1588 aa13.66□□□□□ -0.22
Lin54-202ENSMUST00000123572 Npm2Q80W85 207 aa13.64□□□□□ -0.23
Lin54-202ENSMUST00000123572 Dcaf1Q80TR8 1506 aa13.64□□□□□ -0.23
Lin54-202ENSMUST00000123572 HrcG5E8J6 738 aa13.52□□□□□ -0.24
Lin54-202ENSMUST00000123572 Kdm5dQ62240 1548 aa13.5□□□□□ -0.25
Lin54-202ENSMUST00000123572 Baz1aO88379 1555 aa13.46□□□□□ -0.26
Lin54-202ENSMUST00000123572 Il27Q8K3I6 234 aa13.44□□□□□ -0.26
Lin54-202ENSMUST00000123572 Rpgrip1Q9EPQ2 1331 aa13.43□□□□□ -0.26
Lin54-202ENSMUST00000123572 Gab3Q8BSM5 595 aa13.4□□□□□ -0.26
Lin54-202ENSMUST00000123572 ScribQ80U72 1612 aa13.38□□□□□ -0.27
Lin54-202ENSMUST00000123572 Myt1lP97500 1187 aa13.31□□□□□ -0.28
Lin54-202ENSMUST00000123572 Brd4Q9ESU6 1400 aaKnown RBP13.3□□□□□ -0.28
Lin54-202ENSMUST00000123572 Ttbk1Q6PCN3 1308 aa13.29□□□□□ -0.28
Lin54-202ENSMUST00000123572 Ehmt2Q9Z148 1263 aaKnown RBP13.29□□□□□ -0.28
Lin54-202ENSMUST00000123572 Sycp2Q9CUU3 1500 aa13.2□□□□□ -0.3
Lin54-202ENSMUST00000123572 Crybg2B7ZCC2 1516 aa13.17□□□□□ -0.3
Lin54-202ENSMUST00000123572 Plppr3Q7TPB0 716 aa13.14□□□□□ -0.31
Lin54-202ENSMUST00000123572 Npm1Q61937 292 aaKnown RBP13.08□□□□□ -0.32
Lin54-202ENSMUST00000123572 Pelp1Q9DBD5 1123 aaKnown RBP13.07□□□□□ -0.32
Lin54-202ENSMUST00000123572 Gm13697A2AK42 830 aa13.06□□□□□ -0.32
Lin54-202ENSMUST00000123572 Ifnlr1Q8CGK5 535 aa13.05□□□□□ -0.32
Lin54-202ENSMUST00000123572 Cep164Q5DU05 1446 aa12.95□□□□□ -0.34
Lin54-202ENSMUST00000123572 Smarca2Q6DIC0 1577 aa12.92□□□□□ -0.34
Lin54-202ENSMUST00000123572 Acin1Q9JIX8 1338 aaKnown RBP12.91□□□□□ -0.34
Lin54-202ENSMUST00000123572 Golga3P55937 1487 aa12.9□□□□□ -0.34
Lin54-202ENSMUST00000123572 Pds5bQ4VA53 1446 aaKnown RBP12.88□□□□□ -0.35
Lin54-202ENSMUST00000123572 Chic1Q8CBW7 227 aa12.85□□□□□ -0.35
Lin54-202ENSMUST00000123572 Ercc6F8VPZ5 1481 aa12.83□□□□□ -0.36
Lin54-202ENSMUST00000123572 Os9Q8K2C7 672 aa12.8□□□□□ -0.36
Lin54-202ENSMUST00000123572 UbtfP25976 765 aaKnown RBP12.79□□□□□ -0.36
Lin54-202ENSMUST00000123572 Las1lA2BE28 776 aaKnown RBP12.79□□□□□ -0.36
Lin54-202ENSMUST00000123572 Ubl4bQ9CQ84 188 aa12.78□□□□□ -0.36
Lin54-202ENSMUST00000123572 Cecr2E9Q2Z1 1453 aa12.77□□□□□ -0.37
Lin54-202ENSMUST00000123572 Safb2Q80YR5 991 aaKnown RBP12.76□□□□□ -0.37
Lin54-202ENSMUST00000123572 NefmP08553 848 aa12.75□□□□□ -0.37
Lin54-202ENSMUST00000123572 Rsf1E9PWW9 1441 aaKnown RBP12.73□□□□□ -0.37
Lin54-202ENSMUST00000123572 CftrP26361 1476 aa12.73□□□□□ -0.37
Lin54-202ENSMUST00000123572 Gm13695A2AK44 830 aa12.72□□□□□ -0.37
Lin54-202ENSMUST00000123572 NclP09405 707 aaKnown RBP12.72□□□□□ -0.37
Lin54-202ENSMUST00000123572 Atad2bE9Q166 1460 aaKnown RBP12.71□□□□□ -0.37
Lin54-202ENSMUST00000123572 Smarca4Q3TKT4 1613 aaKnown RBP12.7□□□□□ -0.38
Lin54-202ENSMUST00000123572 Kif15Q6P9L6 1387 aa12.67□□□□□ -0.38
Lin54-202ENSMUST00000123572 Fkbp15Q6P9Q6 1216 aaKnown RBP12.66□□□□□ -0.38
Lin54-202ENSMUST00000123572 Synj1Q8CHC4 1574 aa12.65□□□□□ -0.39
Lin54-202ENSMUST00000123572 Ap3b1Q9Z1T1 1105 aa12.63□□□□□ -0.39
Lin54-202ENSMUST00000123572 Wdr66E9Q743 1299 aa12.61□□□□□ -0.39
Lin54-202ENSMUST00000123572 Hnrnpul2Q00PI9 745 aaKnown RBP12.61□□□□□ -0.39
Lin54-202ENSMUST00000123572 Cttnbp2B9EJA2 1648 aa12.6□□□□□ -0.39
Lin54-202ENSMUST00000123572 Fmn1Q05860 1466 aa12.59□□□□□ -0.39
Lin54-202ENSMUST00000123572 Ccdc18Q640L5 1455 aa12.58□□□□□ -0.4
Lin54-202ENSMUST00000123572 BicraF8VPZ9 1578 aa12.57□□□□□ -0.4
Lin54-202ENSMUST00000123572 Zbtb7cQ8VCZ7 619 aa12.56□□□□□ -0.4
Lin54-202ENSMUST00000123572 Atp1b4Q99ME6 356 aa12.54□□□□□ -0.4
Lin54-202ENSMUST00000123572 Ccdc88bQ4QRL3 1481 aa12.53□□□□□ -0.4
Lin54-202ENSMUST00000123572 Iqgap2Q3UQ44 1575 aa12.53□□□□□ -0.4
Lin54-202ENSMUST00000123572 Clip1Q922J3 1391 aa12.53□□□□□ -0.4
Lin54-202ENSMUST00000123572 Phldb1Q6PDH0 1371 aaKnown RBP12.48□□□□□ -0.41
Lin54-202ENSMUST00000123572 Fam50aQ9WV03 339 aaKnown RBP12.47□□□□□ -0.41
Lin54-202ENSMUST00000123572 Plekhg3Q4VAC9 1341 aa12.46□□□□□ -0.41
Lin54-202ENSMUST00000123572 Slc24a1Q91WD8 1130 aa12.46□□□□□ -0.42
Lin54-202ENSMUST00000123572 Mier1Q5UAK0 511 aa12.45□□□□□ -0.42
Lin54-202ENSMUST00000123572 MyclP10166 368 aa12.44□□□□□ -0.42
Lin54-202ENSMUST00000123572 Lmod2Q3UHZ5 550 aa12.4□□□□□ -0.43
Lin54-202ENSMUST00000123572 Anp32bQ9EST5 272 aaKnown RBP12.36□□□□□ -0.43
Lin54-202ENSMUST00000123572 Setd5Q5XJV7 1441 aa12.35□□□□□ -0.43
Lin54-202ENSMUST00000123572 Cux2P70298 1426 aa12.35□□□□□ -0.43
Lin54-202ENSMUST00000123572 DiexfQ8BTT6 772 aaKnown RBP12.35□□□□□ -0.43
Lin54-202ENSMUST00000123572 Neurod1Q60867 357 aa12.35□□□□□ -0.43
Lin54-202ENSMUST00000123572 Erich6D3Z6S9 713 aa12.34□□□□□ -0.43
Lin54-202ENSMUST00000123572 Cep162Q6ZQ06 1403 aa12.33□□□□□ -0.44
Lin54-202ENSMUST00000123572 Eea1Q8BL66 1411 aa12.32□□□□□ -0.44
Lin54-202ENSMUST00000123572 Ppp1r18Q8BQ30 594 aa12.3□□□□□ -0.44
Lin54-202ENSMUST00000123572 TonslQ6NZL6 1363 aa12.28□□□□□ -0.44
Lin54-202ENSMUST00000123572 MlecQ6ZQI3 291 aaKnown RBP12.28□□□□□ -0.44
Lin54-202ENSMUST00000123572 Frmpd1A2AKB4 1549 aa12.26□□□□□ -0.45
Lin54-202ENSMUST00000123572 BlmO88700 1416 aa12.26□□□□□ -0.45
Lin54-202ENSMUST00000123572 Hdac5Q9Z2V6 1113 aa12.24□□□□□ -0.45
Lin54-202ENSMUST00000123572 Rapgef2Q8CHG7 1496 aa12.21□□□□□ -0.46
Lin54-202ENSMUST00000123572 LrpprcQ6PB66 1392 aaKnown RBP12.21□□□□□ -0.46
Lin54-202ENSMUST00000123572 Wdr62Q3U3T8 1523 aa12.2□□□□□ -0.46
Lin54-202ENSMUST00000123572 Cc2d2aQ8CFW7 1633 aa12.2□□□□□ -0.46
Lin54-202ENSMUST00000123572 Ggt6Q6PDE7 497 aa12.19□□□□□ -0.46
Lin54-202ENSMUST00000123572 Top2bQ64511 1612 aa12.19□□□□□ -0.46
Lin54-202ENSMUST00000123572 Ccer2J3QPU5 274 aa12.18□□□□□ -0.46
Lin54-202ENSMUST00000123572 Top2aQ01320 1528 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 263.3 ms