RNA–Protein interactions for RNA: ENSMUST00000117601.7

Limch1-203, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 5 BASIC

Gene Limch1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-203ENSMUST00000117601 NischQ80TM9 1593 aa16.59■□□□□ 0.25
Limch1-203ENSMUST00000117601 Gm35339A0A140LHH9 1649 aa16.22■□□□□ 0.19
Limch1-203ENSMUST00000117601 Abcc9P70170 1546 aa16.01■□□□□ 0.15
Limch1-203ENSMUST00000117601 Abcc8B2RUS7 1588 aa15.8■□□□□ 0.12
Limch1-203ENSMUST00000117601 Rhox8Q6VSS7 320 aa15.4■□□□□ 0.06
Limch1-203ENSMUST00000117601 ScribQ80U72 1612 aa14.9□□□□□ -0.02
Limch1-203ENSMUST00000117601 Kdm5dQ62240 1548 aa14.57□□□□□ -0.08
Limch1-203ENSMUST00000117601 Rb1cc1Q9ESK9 1588 aa14.51□□□□□ -0.09
Limch1-203ENSMUST00000117601 Dcaf1Q80TR8 1506 aa14.49□□□□□ -0.09
Limch1-203ENSMUST00000117601 NacadQ5SWP3 1504 aa14.42□□□□□ -0.1
Limch1-203ENSMUST00000117601 Ccdc136Q3TVA9 1136 aa14.36□□□□□ -0.11
Limch1-203ENSMUST00000117601 Rtl1Q7M732 1744 aa14.35□□□□□ -0.11
Limch1-203ENSMUST00000117601 Baz1aO88379 1555 aa14.27□□□□□ -0.12
Limch1-203ENSMUST00000117601 Zcchc6Q5BLK4 1491 aaKnown RBP14.22□□□□□ -0.13
Limch1-203ENSMUST00000117601 Ccdc180J3QNE4 1664 aa14.15□□□□□ -0.14
Limch1-203ENSMUST00000117601 Sycp2Q9CUU3 1500 aa14.14□□□□□ -0.15
Limch1-203ENSMUST00000117601 Crybg2B7ZCC2 1516 aa13.93□□□□□ -0.18
Limch1-203ENSMUST00000117601 Smarca2Q6DIC0 1577 aa13.92□□□□□ -0.18
Limch1-203ENSMUST00000117601 BicraF8VPZ9 1578 aa13.91□□□□□ -0.18
Limch1-203ENSMUST00000117601 Cecr2E9Q2Z1 1453 aa13.86□□□□□ -0.19
Limch1-203ENSMUST00000117601 Trim41Q5NCC3 630 aa13.83□□□□□ -0.2
Limch1-203ENSMUST00000117601 Cngb1E1AZ71 1325 aa13.71□□□□□ -0.21
Limch1-203ENSMUST00000117601 HrcG5E8J6 738 aa13.64□□□□□ -0.23
Limch1-203ENSMUST00000117601 Esf1Q3V1V3 845 aaKnown RBP13.62□□□□□ -0.23
Limch1-203ENSMUST00000117601 Brd4Q9ESU6 1400 aaKnown RBP13.61□□□□□ -0.23
Limch1-203ENSMUST00000117601 Synj1Q8CHC4 1574 aa13.6□□□□□ -0.23
Limch1-203ENSMUST00000117601 Ehmt2Q9Z148 1263 aaKnown RBP13.57□□□□□ -0.24
Limch1-203ENSMUST00000117601 Chic1Q8CBW7 227 aa13.55□□□□□ -0.24
Limch1-203ENSMUST00000117601 CftrP26361 1476 aa13.52□□□□□ -0.25
Limch1-203ENSMUST00000117601 Gab3Q8BSM5 595 aa13.48□□□□□ -0.25
Limch1-203ENSMUST00000117601 Smarca4Q3TKT4 1613 aaKnown RBP13.46□□□□□ -0.25
Limch1-203ENSMUST00000117601 Rsf1E9PWW9 1441 aaKnown RBP13.43□□□□□ -0.26
Limch1-203ENSMUST00000117601 Golga3P55937 1487 aa13.42□□□□□ -0.26
Limch1-203ENSMUST00000117601 Ccdc88bQ4QRL3 1481 aa13.41□□□□□ -0.26
Limch1-203ENSMUST00000117601 Cttnbp2B9EJA2 1648 aa13.36□□□□□ -0.27
Limch1-203ENSMUST00000117601 Iqgap2Q3UQ44 1575 aa13.35□□□□□ -0.27
Limch1-203ENSMUST00000117601 Cep164Q5DU05 1446 aa13.34□□□□□ -0.27
Limch1-203ENSMUST00000117601 Atad2bE9Q166 1460 aaKnown RBP13.32□□□□□ -0.28
Limch1-203ENSMUST00000117601 Pds5bQ4VA53 1446 aaKnown RBP13.29□□□□□ -0.28
Limch1-203ENSMUST00000117601 Cc2d2aQ8CFW7 1633 aa13.22□□□□□ -0.29
Limch1-203ENSMUST00000117601 Top2bQ64511 1612 aa13.22□□□□□ -0.29
Limch1-203ENSMUST00000117601 Rpgrip1Q9EPQ2 1331 aa13.17□□□□□ -0.3
Limch1-203ENSMUST00000117601 Frmpd1A2AKB4 1549 aa13.16□□□□□ -0.3
Limch1-203ENSMUST00000117601 Il27Q8K3I6 234 aa13.14□□□□□ -0.31
Limch1-203ENSMUST00000117601 Wdr62Q3U3T8 1523 aa13.09□□□□□ -0.31
Limch1-203ENSMUST00000117601 Ercc6F8VPZ5 1481 aa13.08□□□□□ -0.32
Limch1-203ENSMUST00000117601 Fmn1Q05860 1466 aa13.07□□□□□ -0.32
Limch1-203ENSMUST00000117601 Myt1lP97500 1187 aa13.05□□□□□ -0.32
Limch1-203ENSMUST00000117601 Kif15Q6P9L6 1387 aa13.02□□□□□ -0.32
Limch1-203ENSMUST00000117601 Npm2Q80W85 207 aa13.01□□□□□ -0.33
Limch1-203ENSMUST00000117601 Dnajc5bQ9CQ94 199 aa12.99□□□□□ -0.33
Limch1-203ENSMUST00000117601 Pcgf6Q99NA9 353 aa12.97□□□□□ -0.33
Limch1-203ENSMUST00000117601 Ubl4bQ9CQ84 188 aa12.97□□□□□ -0.33
Limch1-203ENSMUST00000117601 DiexfQ8BTT6 772 aaKnown RBP12.96□□□□□ -0.33
Limch1-203ENSMUST00000117601 Acin1Q9JIX8 1338 aaKnown RBP12.96□□□□□ -0.33
Limch1-203ENSMUST00000117601 Top2aQ01320 1528 aaKnown RBP12.96□□□□□ -0.33
Limch1-203ENSMUST00000117601 Unc13aQ4KUS2 1712 aa12.95□□□□□ -0.34
Limch1-203ENSMUST00000117601 Rapgef2Q8CHG7 1496 aa12.92□□□□□ -0.34
Limch1-203ENSMUST00000117601 Thoc2B1AZI6 1594 aaKnown RBP12.91□□□□□ -0.34
Limch1-203ENSMUST00000117601 Phldb1Q6PDH0 1371 aaKnown RBP12.9□□□□□ -0.35
Limch1-203ENSMUST00000117601 TnnQ80Z71 1560 aa12.87□□□□□ -0.35
Limch1-203ENSMUST00000117601 Lamc3Q9R0B6 1581 aa12.86□□□□□ -0.35
Limch1-203ENSMUST00000117601 PtprkP35822 1457 aa12.86□□□□□ -0.35
Limch1-203ENSMUST00000117601 Cep162Q6ZQ06 1403 aa12.85□□□□□ -0.35
Limch1-203ENSMUST00000117601 Cux2P70298 1426 aa12.83□□□□□ -0.35
Limch1-203ENSMUST00000117601 Zeb1Q64318 1117 aa12.82□□□□□ -0.36
Limch1-203ENSMUST00000117601 Npm1Q61937 292 aaKnown RBP12.82□□□□□ -0.36
Limch1-203ENSMUST00000117601 Myt1Q8CFC2 1127 aa12.81□□□□□ -0.36
Limch1-203ENSMUST00000117601 Camsap1A2AHC3 1581 aa12.78□□□□□ -0.36
Limch1-203ENSMUST00000117601 UbtfP25976 765 aaKnown RBP12.78□□□□□ -0.36
Limch1-203ENSMUST00000117601 Ap3b1Q9Z1T1 1105 aa12.77□□□□□ -0.37
Limch1-203ENSMUST00000117601 Ccdc18Q640L5 1455 aa12.75□□□□□ -0.37
Limch1-203ENSMUST00000117601 Plekhg3Q4VAC9 1341 aa12.72□□□□□ -0.37
Limch1-203ENSMUST00000117601 Fam135aQ6NS59 1506 aa12.72□□□□□ -0.37
Limch1-203ENSMUST00000117601 Arhgap35Q91YM2 1499 aa12.7□□□□□ -0.38
Limch1-203ENSMUST00000117601 Grin2bQ01097 1482 aa12.69□□□□□ -0.38
Limch1-203ENSMUST00000117601 Mier1Q5UAK0 511 aa12.69□□□□□ -0.38
Limch1-203ENSMUST00000117601 Clip1Q922J3 1391 aa12.68□□□□□ -0.38
Limch1-203ENSMUST00000117601 Shroom4Q1W617 1475 aa12.67□□□□□ -0.38
Limch1-203ENSMUST00000117601 CenpbP27790 599 aa12.67□□□□□ -0.38
Limch1-203ENSMUST00000117601 LrpprcQ6PB66 1392 aaKnown RBP12.65□□□□□ -0.38
Limch1-203ENSMUST00000117601 NrkQ9R0G8 1455 aa12.64□□□□□ -0.39
Limch1-203ENSMUST00000117601 Eif4g1Q6NZJ6 1600 aaKnown RBP12.64□□□□□ -0.39
Limch1-203ENSMUST00000117601 Baz1bQ9Z277 1479 aa12.63□□□□□ -0.39
Limch1-203ENSMUST00000117601 Dhx29Q6PGC1 1365 aaKnown RBP12.6□□□□□ -0.39
Limch1-203ENSMUST00000117601 Duox2A2AQ99 1517 aa12.59□□□□□ -0.39
Limch1-203ENSMUST00000117601 PogzQ8BZH4 1409 aaKnown RBP12.58□□□□□ -0.4
Limch1-203ENSMUST00000117601 Setd5Q5XJV7 1441 aa12.56□□□□□ -0.4
Limch1-203ENSMUST00000117601 Bcl11aQ9QYE3 773 aa12.56□□□□□ -0.4
Limch1-203ENSMUST00000117601 Mroh2bQ7M6Y6 1581 aa12.55□□□□□ -0.4
Limch1-203ENSMUST00000117601 Mrc2Q64449 1479 aa12.55□□□□□ -0.4
Limch1-203ENSMUST00000117601 Rad54l2Q99NG0 1466 aa12.55□□□□□ -0.4
Limch1-203ENSMUST00000117601 Las1lA2BE28 776 aaKnown RBP12.55□□□□□ -0.4
Limch1-203ENSMUST00000117601 Arap1Q4LDD4 1452 aa12.53□□□□□ -0.4
Limch1-203ENSMUST00000117601 Efcab5A0JP43 1406 aa12.52□□□□□ -0.4
Limch1-203ENSMUST00000117601 Kif21aQ9QXL2 1672 aa12.52□□□□□ -0.41
Limch1-203ENSMUST00000117601 Eea1Q8BL66 1411 aa12.52□□□□□ -0.41
Limch1-203ENSMUST00000117601 Lmod2Q3UHZ5 550 aa12.52□□□□□ -0.41
Limch1-203ENSMUST00000117601 Samd9lQ69Z37 1561 aa12.5□□□□□ -0.41
Limch1-203ENSMUST00000117601 Amer1Q7TS75 1132 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms