RNA–Protein interactions for RNA: ENSMUST00000113064.7

Traf1-202, Transcript of TNF receptor-associated factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf1, Length 2,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1-202ENSMUST00000113064 NischQ80TM9 1593 aa26.34■■□□□ 1.81
Traf1-202ENSMUST00000113064 Gm35339A0A140LHH9 1649 aa26.1■■□□□ 1.77
Traf1-202ENSMUST00000113064 Abcc9P70170 1546 aa25.63■■□□□ 1.69
Traf1-202ENSMUST00000113064 Abcc8B2RUS7 1588 aa25.03■■□□□ 1.6
Traf1-202ENSMUST00000113064 Rtl1Q7M732 1744 aa24.3■■□□□ 1.48
Traf1-202ENSMUST00000113064 Rhox8Q6VSS7 320 aa24.12■■□□□ 1.45
Traf1-202ENSMUST00000113064 Ccdc180J3QNE4 1664 aa23.72■■□□□ 1.39
Traf1-202ENSMUST00000113064 Dcaf1Q80TR8 1506 aa23.48■■□□□ 1.35
Traf1-202ENSMUST00000113064 ScribQ80U72 1612 aa23.35■■□□□ 1.33
Traf1-202ENSMUST00000113064 Zcchc6Q5BLK4 1491 aaKnown RBP23.19■■□□□ 1.3
Traf1-202ENSMUST00000113064 Rb1cc1Q9ESK9 1588 aa23.11■■□□□ 1.29
Traf1-202ENSMUST00000113064 Kdm5dQ62240 1548 aa22.89■■□□□ 1.25
Traf1-202ENSMUST00000113064 Baz1aO88379 1555 aa22.86■■□□□ 1.25
Traf1-202ENSMUST00000113064 NacadQ5SWP3 1504 aa22.74■■□□□ 1.23
Traf1-202ENSMUST00000113064 Crybg2B7ZCC2 1516 aa22.51■■□□□ 1.19
Traf1-202ENSMUST00000113064 HrcG5E8J6 738 aa22.45■■□□□ 1.18
Traf1-202ENSMUST00000113064 Smarca2Q6DIC0 1577 aa22.35■■□□□ 1.17
Traf1-202ENSMUST00000113064 Ccdc136Q3TVA9 1136 aa22.34■■□□□ 1.17
Traf1-202ENSMUST00000113064 Sycp2Q9CUU3 1500 aa22.23■■□□□ 1.15
Traf1-202ENSMUST00000113064 Rpgrip1Q9EPQ2 1331 aa22.23■■□□□ 1.15
Traf1-202ENSMUST00000113064 Trim41Q5NCC3 630 aa22.05■■□□□ 1.12
Traf1-202ENSMUST00000113064 Cep164Q5DU05 1446 aa21.83■■□□□ 1.09
Traf1-202ENSMUST00000113064 Acin1Q9JIX8 1338 aaKnown RBP21.83■■□□□ 1.08
Traf1-202ENSMUST00000113064 Brd4Q9ESU6 1400 aaKnown RBP21.77■■□□□ 1.07
Traf1-202ENSMUST00000113064 BicraF8VPZ9 1578 aa21.72■■□□□ 1.07
Traf1-202ENSMUST00000113064 Cecr2E9Q2Z1 1453 aa21.64■■□□□ 1.06
Traf1-202ENSMUST00000113064 Synj1Q8CHC4 1574 aa21.56■■□□□ 1.04
Traf1-202ENSMUST00000113064 Golga3P55937 1487 aa21.52■■□□□ 1.03
Traf1-202ENSMUST00000113064 Ehmt2Q9Z148 1263 aaKnown RBP21.5■■□□□ 1.03
Traf1-202ENSMUST00000113064 Rsf1E9PWW9 1441 aaKnown RBP21.47■■□□□ 1.03
Traf1-202ENSMUST00000113064 Cttnbp2B9EJA2 1648 aa21.43■■□□□ 1.02
Traf1-202ENSMUST00000113064 CftrP26361 1476 aa21.42■■□□□ 1.02
Traf1-202ENSMUST00000113064 Cngb1E1AZ71 1325 aa21.41■■□□□ 1.02
Traf1-202ENSMUST00000113064 Top2bQ64511 1612 aa21.38■■□□□ 1.01
Traf1-202ENSMUST00000113064 Ccdc88bQ4QRL3 1481 aa21.32■■□□□ 1
Traf1-202ENSMUST00000113064 Chic1Q8CBW7 227 aa21.32■■□□□ 1
Traf1-202ENSMUST00000113064 Smarca4Q3TKT4 1613 aaKnown RBP21.31■■□□□ 1
Traf1-202ENSMUST00000113064 Esf1Q3V1V3 845 aaKnown RBP21.12■□□□□ 0.97
Traf1-202ENSMUST00000113064 Cc2d2aQ8CFW7 1633 aa21.11■□□□□ 0.97
Traf1-202ENSMUST00000113064 Gab3Q8BSM5 595 aa21.07■□□□□ 0.96
Traf1-202ENSMUST00000113064 Iqgap2Q3UQ44 1575 aa20.99■□□□□ 0.95
Traf1-202ENSMUST00000113064 Fmn1Q05860 1466 aa20.99■□□□□ 0.95
Traf1-202ENSMUST00000113064 Top2aQ01320 1528 aaKnown RBP20.91■□□□□ 0.94
Traf1-202ENSMUST00000113064 Atad2bE9Q166 1460 aaKnown RBP20.87■□□□□ 0.93
Traf1-202ENSMUST00000113064 Rapgef2Q8CHG7 1496 aa20.86■□□□□ 0.93
Traf1-202ENSMUST00000113064 Pcgf6Q99NA9 353 aa20.77■□□□□ 0.92
Traf1-202ENSMUST00000113064 Pds5bQ4VA53 1446 aaKnown RBP20.76■□□□□ 0.91
Traf1-202ENSMUST00000113064 TnnQ80Z71 1560 aa20.71■□□□□ 0.91
Traf1-202ENSMUST00000113064 NefmP08553 848 aa20.66■□□□□ 0.9
Traf1-202ENSMUST00000113064 Cep162Q6ZQ06 1403 aa20.64■□□□□ 0.9
Traf1-202ENSMUST00000113064 Eif4g1Q6NZJ6 1600 aaKnown RBP20.6■□□□□ 0.89
Traf1-202ENSMUST00000113064 Mier1Q5UAK0 511 aa20.59■□□□□ 0.89
Traf1-202ENSMUST00000113064 Wdr62Q3U3T8 1523 aa20.57■□□□□ 0.88
Traf1-202ENSMUST00000113064 Frmpd1A2AKB4 1549 aa20.53■□□□□ 0.88
Traf1-202ENSMUST00000113064 Lamc3Q9R0B6 1581 aa20.5■□□□□ 0.87
Traf1-202ENSMUST00000113064 Unc13aQ4KUS2 1712 aa20.45■□□□□ 0.86
Traf1-202ENSMUST00000113064 Supt5hO55201 1082 aaKnown RBP20.44■□□□□ 0.86
Traf1-202ENSMUST00000113064 Ercc6F8VPZ5 1481 aa20.4■□□□□ 0.86
Traf1-202ENSMUST00000113064 Npm2Q80W85 207 aa20.38■□□□□ 0.85
Traf1-202ENSMUST00000113064 NrkQ9R0G8 1455 aa20.35■□□□□ 0.85
Traf1-202ENSMUST00000113064 Myt1lP97500 1187 aa20.35■□□□□ 0.85
Traf1-202ENSMUST00000113064 Arhgap35Q91YM2 1499 aa20.31■□□□□ 0.84
Traf1-202ENSMUST00000113064 UbtfP25976 765 aaKnown RBP20.31■□□□□ 0.84
Traf1-202ENSMUST00000113064 Camsap1A2AHC3 1581 aa20.31■□□□□ 0.84
Traf1-202ENSMUST00000113064 Clip1Q922J3 1391 aa20.28■□□□□ 0.84
Traf1-202ENSMUST00000113064 Zeb1Q64318 1117 aa20.28■□□□□ 0.84
Traf1-202ENSMUST00000113064 Kif15Q6P9L6 1387 aa20.25■□□□□ 0.83
Traf1-202ENSMUST00000113064 Shroom4Q1W617 1475 aa20.25■□□□□ 0.83
Traf1-202ENSMUST00000113064 PtprkP35822 1457 aa20.24■□□□□ 0.83
Traf1-202ENSMUST00000113064 Map3k1P53349 1493 aa20.23■□□□□ 0.83
Traf1-202ENSMUST00000113064 Ccdc18Q640L5 1455 aa20.17■□□□□ 0.82
Traf1-202ENSMUST00000113064 Eea1Q8BL66 1411 aa20.15■□□□□ 0.82
Traf1-202ENSMUST00000113064 Grin2bQ01097 1482 aa20.13■□□□□ 0.81
Traf1-202ENSMUST00000113064 Ncapd3Q6ZQK0 1506 aa20.11■□□□□ 0.81
Traf1-202ENSMUST00000113064 Arap1Q4LDD4 1452 aa20.1■□□□□ 0.81
Traf1-202ENSMUST00000113064 Thoc2B1AZI6 1594 aaKnown RBP20.1■□□□□ 0.81
Traf1-202ENSMUST00000113064 Arhgef5E9Q7D5 1581 aa20.09■□□□□ 0.81
Traf1-202ENSMUST00000113064 Erich3F6QRE9 1637 aa20.07■□□□□ 0.8
Traf1-202ENSMUST00000113064 Las1lA2BE28 776 aaKnown RBP20.06■□□□□ 0.8
Traf1-202ENSMUST00000113064 Mroh2bQ7M6Y6 1581 aa20.05■□□□□ 0.8
Traf1-202ENSMUST00000113064 Plekhg3Q4VAC9 1341 aa20.05■□□□□ 0.8
Traf1-202ENSMUST00000113064 Phldb1Q6PDH0 1371 aaKnown RBP20.05■□□□□ 0.8
Traf1-202ENSMUST00000113064 Il27Q8K3I6 234 aa20.04■□□□□ 0.8
Traf1-202ENSMUST00000113064 AqrQ8CFQ3 1481 aaKnown RBP20.02■□□□□ 0.8
Traf1-202ENSMUST00000113064 Sall2Q9QX96 1004 aa20.02■□□□□ 0.8
Traf1-202ENSMUST00000113064 Setd5Q5XJV7 1441 aa20■□□□□ 0.79
Traf1-202ENSMUST00000113064 Tiam1Q60610 1591 aa19.99■□□□□ 0.79
Traf1-202ENSMUST00000113064 Ankrd26Q811D2 1581 aa19.95■□□□□ 0.78
Traf1-202ENSMUST00000113064 Baz1bQ9Z277 1479 aa19.94■□□□□ 0.78
Traf1-202ENSMUST00000113064 Fam135aQ6NS59 1506 aa19.92■□□□□ 0.78
Traf1-202ENSMUST00000113064 Cux2P70298 1426 aa19.92■□□□□ 0.78
Traf1-202ENSMUST00000113064 Efcab5A0JP43 1406 aa19.9■□□□□ 0.78
Traf1-202ENSMUST00000113064 TchhA0A0B4J1F9 1599 aa19.89■□□□□ 0.77
Traf1-202ENSMUST00000113064 TonslQ6NZL6 1363 aa19.89■□□□□ 0.77
Traf1-202ENSMUST00000113064 Lmo7E9PYF4 1699 aaKnown RBP19.87■□□□□ 0.77
Traf1-202ENSMUST00000113064 Neurod1Q60867 357 aa19.86■□□□□ 0.77
Traf1-202ENSMUST00000113064 Pcf11G3X9Z4 1553 aa19.86■□□□□ 0.77
Traf1-202ENSMUST00000113064 Kdm5bQ80Y84 1544 aa19.86■□□□□ 0.77
Traf1-202ENSMUST00000113064 ClspnQ80YR7 1315 aa19.84■□□□□ 0.77
Traf1-202ENSMUST00000113064 Naip1Q9QWK5 1403 aa19.83■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 89.6 ms