RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Mapk8ip2Q9ERE9 830 aa18.96■□□□□ 0.63
Hmgb1-203ENSMUST00000110505 Chic1Q8CBW7 227 aa18.79■□□□□ 0.6
Hmgb1-203ENSMUST00000110505 Phf23Q8BSN5 401 aa16.65■□□□□ 0.26
Hmgb1-203ENSMUST00000110505 Gab3Q8BSM5 595 aa15.89■□□□□ 0.13
Hmgb1-203ENSMUST00000110505 Plppr3Q7TPB0 716 aa15.66■□□□□ 0.1
Hmgb1-203ENSMUST00000110505 Senp3Q9EP97 568 aaKnown RBP15.06■□□□□ 0
Hmgb1-203ENSMUST00000110505 Fam163aQ8CAA5 168 aa14.39□□□□□ -0.11
Hmgb1-203ENSMUST00000110505 Kcna4Q61423 654 aa13.67□□□□□ -0.22
Hmgb1-203ENSMUST00000110505 Hoxd11P23813 323 aa13.54□□□□□ -0.24
Hmgb1-203ENSMUST00000110505 Trap1aP19473 224 aa13.44□□□□□ -0.26
Hmgb1-203ENSMUST00000110505 ArsiQ32KI9 573 aa13.25□□□□□ -0.29
Hmgb1-203ENSMUST00000110505 Znf219Q6IQX8 726 aa13.22□□□□□ -0.29
Hmgb1-203ENSMUST00000110505 Chrna2Q91X60 512 aa12.82□□□□□ -0.36
Hmgb1-203ENSMUST00000110505 Slc34a2Q9DBP0 697 aa12.79□□□□□ -0.36
Hmgb1-203ENSMUST00000110505 Rsph4aQ8BYM7 716 aa12.76□□□□□ -0.37
Hmgb1-203ENSMUST00000110505 Dnajc5bQ9CQ94 199 aa12.71□□□□□ -0.38
Hmgb1-203ENSMUST00000110505 GapdhsQ64467 440 aa12.57□□□□□ -0.4
Hmgb1-203ENSMUST00000110505 Akt1s1Q9D1F4 257 aa12.53□□□□□ -0.4
Hmgb1-203ENSMUST00000110505 Rimbp2Q80U40 1072 aa12.52□□□□□ -0.41
Hmgb1-203ENSMUST00000110505 Dmrt2Q8BG36 561 aa12.2□□□□□ -0.46
Hmgb1-203ENSMUST00000110505 Hs6st3Q9QYK4 470 aa11.83□□□□□ -0.52
Hmgb1-203ENSMUST00000110505 Ppp4r2Q0VGB7 417 aa11.8□□□□□ -0.52
Hmgb1-203ENSMUST00000110505 Znf704Q9ERQ3 566 aa11.8□□□□□ -0.52
Hmgb1-203ENSMUST00000110505 Slc4a5E9Q3M5 1116 aa11.77□□□□□ -0.52
Hmgb1-203ENSMUST00000110505 Atf5O70191 283 aa11.74□□□□□ -0.53
Hmgb1-203ENSMUST00000110505 Sox12Q04890 314 aa11.72□□□□□ -0.53
Hmgb1-203ENSMUST00000110505 Bach1P97302 739 aa11.56□□□□□ -0.56
Hmgb1-203ENSMUST00000110505 Slc4a1apE9PX68 744 aa11.48□□□□□ -0.57
Hmgb1-203ENSMUST00000110505 Ppargc1bQ8VHJ7 1014 aa11.36□□□□□ -0.59
Hmgb1-203ENSMUST00000110505 Grwd1Q810D6 446 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-203ENSMUST00000110505 Egfem1Q8C088 590 aa11.26□□□□□ -0.61
Hmgb1-203ENSMUST00000110505 Cacnb1Q8R3Z5 597 aa11.25□□□□□ -0.61
Hmgb1-203ENSMUST00000110505 WdpcpQ8C456 722 aa11.23□□□□□ -0.61
Hmgb1-203ENSMUST00000110505 Ifnlr1Q8CGK5 535 aa11.21□□□□□ -0.61
Hmgb1-203ENSMUST00000110505 1700123L14RikQ3V2K7 440 aa11.2□□□□□ -0.62
Hmgb1-203ENSMUST00000110505 Zbtb7aO88939 569 aaKnown RBP11.12□□□□□ -0.63
Hmgb1-203ENSMUST00000110505 Znf703P0CL69 594 aa11.04□□□□□ -0.64
Hmgb1-203ENSMUST00000110505 Rnf216P58283 853 aa11.01□□□□□ -0.65
Hmgb1-203ENSMUST00000110505 G430095P16RikE9Q913 147 aa10.98□□□□□ -0.65
Hmgb1-203ENSMUST00000110505 Kcnn1Q9EQR3 537 aa10.98□□□□□ -0.65
Hmgb1-203ENSMUST00000110505 Ildr2B5TVM2 661 aa10.95□□□□□ -0.66
Hmgb1-203ENSMUST00000110505 Prr29B1ARI9 187 aa10.94□□□□□ -0.66
Hmgb1-203ENSMUST00000110505 Abcb7Q61102 752 aaKnown RBP10.91□□□□□ -0.66
Hmgb1-203ENSMUST00000110505 Zbtb12Q9Z150 459 aa10.89□□□□□ -0.67
Hmgb1-203ENSMUST00000110505 Cdca7Q9D0M2 382 aa10.81□□□□□ -0.68
Hmgb1-203ENSMUST00000110505 Nkx1-1G3UXB3 402 aa10.74□□□□□ -0.69
Hmgb1-203ENSMUST00000110505 Gtpbp6Q3U6U5 514 aa10.71□□□□□ -0.69
Hmgb1-203ENSMUST00000110505 C1qtnf12Q8R2Z0 308 aa10.68□□□□□ -0.7
Hmgb1-203ENSMUST00000110505 Clcn6O35454 870 aa10.64□□□□□ -0.71
Hmgb1-203ENSMUST00000110505 Pip4p2Q9CZX7 257 aa10.52□□□□□ -0.73
Hmgb1-203ENSMUST00000110505 Kank3Q9Z1P7 791 aa10.47□□□□□ -0.73
Hmgb1-203ENSMUST00000110505 Trim41Q5NCC3 630 aa10.43□□□□□ -0.74
Hmgb1-203ENSMUST00000110505 Pitpnm1O35954 1243 aa10.36□□□□□ -0.75
Hmgb1-203ENSMUST00000110505 Ms4a5Q810P8 197 aa10.34□□□□□ -0.75
Hmgb1-203ENSMUST00000110505 Trim35Q8C006 501 aa10.25□□□□□ -0.77
Hmgb1-203ENSMUST00000110505 Riok3Q9DBU3 519 aaKnown RBP10.25□□□□□ -0.77
Hmgb1-203ENSMUST00000110505 Ube2uB1AUC4 352 aa10.22□□□□□ -0.77
Hmgb1-203ENSMUST00000110505 Npm2Q80W85 207 aa10.22□□□□□ -0.77
Hmgb1-203ENSMUST00000110505 Fbln2P37889 1221 aa10.19□□□□□ -0.78
Hmgb1-203ENSMUST00000110505 Nlrp6Q91WS2 869 aa10.14□□□□□ -0.79
Hmgb1-203ENSMUST00000110505 MyclP10166 368 aa10.13□□□□□ -0.79
Hmgb1-203ENSMUST00000110505 Foxp4Q9DBY0 795 aaKnown RBP10.1□□□□□ -0.79
Hmgb1-203ENSMUST00000110505 Skida1Q80YR3 822 aa10.07□□□□□ -0.8
Hmgb1-203ENSMUST00000110505 Gm35339A0A140LHH9 1649 aa10.03□□□□□ -0.8
Hmgb1-203ENSMUST00000110505 Npm3Q9CPP0 175 aaKnown RBP10.01□□□□□ -0.81
Hmgb1-203ENSMUST00000110505 ArntlQ9WTL8 632 aa9.98□□□□□ -0.81
Hmgb1-203ENSMUST00000110505 Dok7Q18PE0 504 aa9.93□□□□□ -0.82
Hmgb1-203ENSMUST00000110505 MpndQ3TV65 487 aa9.93□□□□□ -0.82
Hmgb1-203ENSMUST00000110505 Cadps2Q8BYR5 1297 aa9.9□□□□□ -0.82
Hmgb1-203ENSMUST00000110505 Nyap1Q6PFX7 833 aa9.87□□□□□ -0.83
Hmgb1-203ENSMUST00000110505 NischQ80TM9 1593 aa9.84□□□□□ -0.83
Hmgb1-203ENSMUST00000110505 Fam71e1A1L3C1 212 aa9.83□□□□□ -0.84
Hmgb1-203ENSMUST00000110505 SnphQ80U23 495 aa9.81□□□□□ -0.84
Hmgb1-203ENSMUST00000110505 Prm3Q62100 101 aa9.79□□□□□ -0.84
Hmgb1-203ENSMUST00000110505 Evx2P49749 475 aa9.77□□□□□ -0.85
Hmgb1-203ENSMUST00000110505 AcrbpQ3V140 540 aa9.77□□□□□ -0.85
Hmgb1-203ENSMUST00000110505 Abcc9P70170 1546 aa9.76□□□□□ -0.85
Hmgb1-203ENSMUST00000110505 Gjc2Q8BQU6 440 aa9.72□□□□□ -0.85
Hmgb1-203ENSMUST00000110505 Styxl1Q9DAR2 321 aa9.69□□□□□ -0.86
Hmgb1-203ENSMUST00000110505 Pde4cQ3UEI1 686 aa9.65□□□□□ -0.87
Hmgb1-203ENSMUST00000110505 Fxr2Q9WVR4 673 aaKnown RBP9.64□□□□□ -0.87
Hmgb1-203ENSMUST00000110505 Lrrc43Q3V0L5 667 aa9.62□□□□□ -0.87
Hmgb1-203ENSMUST00000110505 Hnrnpul2Q00PI9 745 aaKnown RBP9.59□□□□□ -0.87
Hmgb1-203ENSMUST00000110505 Abcc8B2RUS7 1588 aa9.59□□□□□ -0.87
Hmgb1-203ENSMUST00000110505 Jarid2Q62315 1234 aa9.58□□□□□ -0.88
Hmgb1-203ENSMUST00000110505 Map3k10Q66L42 940 aa9.58□□□□□ -0.88
Hmgb1-203ENSMUST00000110505 Ehmt2Q9Z148 1263 aaKnown RBP9.58□□□□□ -0.88
Hmgb1-203ENSMUST00000110505 Zranb1Q7M760 708 aa9.53□□□□□ -0.88
Hmgb1-203ENSMUST00000110505 Znf710Q3U288 666 aa9.51□□□□□ -0.89
Hmgb1-203ENSMUST00000110505 Kiaa1522A2A7S8 1013 aa9.45□□□□□ -0.9
Hmgb1-203ENSMUST00000110505 ScribQ80U72 1612 aa9.44□□□□□ -0.9
Hmgb1-203ENSMUST00000110505 Rtn4Q99P72 1162 aaKnown RBP9.43□□□□□ -0.9
Hmgb1-203ENSMUST00000110505 Ppp1r37Q8BKR5 712 aa9.4□□□□□ -0.9
Hmgb1-203ENSMUST00000110505 Sra1Q80VJ2 232 aa9.37□□□□□ -0.91
Hmgb1-203ENSMUST00000110505 TMEM121BQ99MX7 572 aa9.37□□□□□ -0.91
Hmgb1-203ENSMUST00000110505 Lhx8O35652 367 aa9.36□□□□□ -0.91
Hmgb1-203ENSMUST00000110505 Rnf225Q9D7D1 332 aa9.3□□□□□ -0.92
Hmgb1-203ENSMUST00000110505 Tcf3P15806 651 aa9.29□□□□□ -0.92
Hmgb1-203ENSMUST00000110505 Tshz2Q68FE9 1030 aa9.27□□□□□ -0.93
Hmgb1-203ENSMUST00000110505 OsbpQ3B7Z2 805 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms