RNA–Protein interactions for RNA: ENSMUST00000084589.10

Cln3-202, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-202ENSMUST00000084589 NischQ80TM9 1593 aa18.48■□□□□ 0.55
Cln3-202ENSMUST00000084589 Gm35339A0A140LHH9 1649 aa17.85■□□□□ 0.45
Cln3-202ENSMUST00000084589 Abcc9P70170 1546 aa17.77■□□□□ 0.44
Cln3-202ENSMUST00000084589 Rhox8Q6VSS7 320 aa17.61■□□□□ 0.41
Cln3-202ENSMUST00000084589 Abcc8B2RUS7 1588 aa17.5■□□□□ 0.39
Cln3-202ENSMUST00000084589 ScribQ80U72 1612 aa16.49■□□□□ 0.23
Cln3-202ENSMUST00000084589 Ccdc136Q3TVA9 1136 aa16.36■□□□□ 0.21
Cln3-202ENSMUST00000084589 Rb1cc1Q9ESK9 1588 aa16.21■□□□□ 0.19
Cln3-202ENSMUST00000084589 Kdm5dQ62240 1548 aa16.2■□□□□ 0.18
Cln3-202ENSMUST00000084589 Rtl1Q7M732 1744 aa16.11■□□□□ 0.17
Cln3-202ENSMUST00000084589 Zcchc6Q5BLK4 1491 aaKnown RBP16.02■□□□□ 0.16
Cln3-202ENSMUST00000084589 NacadQ5SWP3 1504 aa16■□□□□ 0.15
Cln3-202ENSMUST00000084589 Dcaf1Q80TR8 1506 aa15.96■□□□□ 0.15
Cln3-202ENSMUST00000084589 Ccdc180J3QNE4 1664 aa15.93■□□□□ 0.14
Cln3-202ENSMUST00000084589 Baz1aO88379 1555 aa15.88■□□□□ 0.13
Cln3-202ENSMUST00000084589 Ehmt2Q9Z148 1263 aaKnown RBP15.72■□□□□ 0.11
Cln3-202ENSMUST00000084589 Cngb1E1AZ71 1325 aa15.67■□□□□ 0.1
Cln3-202ENSMUST00000084589 Sycp2Q9CUU3 1500 aa15.66■□□□□ 0.1
Cln3-202ENSMUST00000084589 Trim41Q5NCC3 630 aa15.63■□□□□ 0.09
Cln3-202ENSMUST00000084589 Esf1Q3V1V3 845 aaKnown RBP15.53■□□□□ 0.08
Cln3-202ENSMUST00000084589 Gab3Q8BSM5 595 aa15.46■□□□□ 0.07
Cln3-202ENSMUST00000084589 Smarca2Q6DIC0 1577 aa15.46■□□□□ 0.07
Cln3-202ENSMUST00000084589 Cecr2E9Q2Z1 1453 aa15.45■□□□□ 0.06
Cln3-202ENSMUST00000084589 BicraF8VPZ9 1578 aa15.38■□□□□ 0.05
Cln3-202ENSMUST00000084589 Crybg2B7ZCC2 1516 aa15.34■□□□□ 0.05
Cln3-202ENSMUST00000084589 HrcG5E8J6 738 aa15.34■□□□□ 0.05
Cln3-202ENSMUST00000084589 Chic1Q8CBW7 227 aa15.29■□□□□ 0.04
Cln3-202ENSMUST00000084589 Brd4Q9ESU6 1400 aaKnown RBP15.23■□□□□ 0.03
Cln3-202ENSMUST00000084589 Synj1Q8CHC4 1574 aa15.18■□□□□ 0.02
Cln3-202ENSMUST00000084589 Rsf1E9PWW9 1441 aaKnown RBP15.09■□□□□ 0.01
Cln3-202ENSMUST00000084589 Ccdc88bQ4QRL3 1481 aa15.05■□□□□ 0
Cln3-202ENSMUST00000084589 CftrP26361 1476 aa15.05■□□□□ -0
Cln3-202ENSMUST00000084589 Golga3P55937 1487 aa15.01□□□□□ -0.01
Cln3-202ENSMUST00000084589 Cep164Q5DU05 1446 aa14.99□□□□□ -0.01
Cln3-202ENSMUST00000084589 Il27Q8K3I6 234 aa14.99□□□□□ -0.01
Cln3-202ENSMUST00000084589 Smarca4Q3TKT4 1613 aaKnown RBP14.97□□□□□ -0.01
Cln3-202ENSMUST00000084589 Myt1lP97500 1187 aa14.96□□□□□ -0.01
Cln3-202ENSMUST00000084589 Cttnbp2B9EJA2 1648 aa14.89□□□□□ -0.03
Cln3-202ENSMUST00000084589 Npm2Q80W85 207 aa14.88□□□□□ -0.03
Cln3-202ENSMUST00000084589 Iqgap2Q3UQ44 1575 aa14.86□□□□□ -0.03
Cln3-202ENSMUST00000084589 Cc2d2aQ8CFW7 1633 aa14.83□□□□□ -0.04
Cln3-202ENSMUST00000084589 Atad2bE9Q166 1460 aaKnown RBP14.78□□□□□ -0.04
Cln3-202ENSMUST00000084589 Acin1Q9JIX8 1338 aaKnown RBP14.78□□□□□ -0.04
Cln3-202ENSMUST00000084589 Pds5bQ4VA53 1446 aaKnown RBP14.77□□□□□ -0.04
Cln3-202ENSMUST00000084589 Zeb1Q64318 1117 aa14.71□□□□□ -0.05
Cln3-202ENSMUST00000084589 Top2bQ64511 1612 aa14.69□□□□□ -0.06
Cln3-202ENSMUST00000084589 UbtfP25976 765 aaKnown RBP14.65□□□□□ -0.06
Cln3-202ENSMUST00000084589 Ercc6F8VPZ5 1481 aa14.64□□□□□ -0.07
Cln3-202ENSMUST00000084589 Kif15Q6P9L6 1387 aa14.63□□□□□ -0.07
Cln3-202ENSMUST00000084589 Ap3b1Q9Z1T1 1105 aa14.62□□□□□ -0.07
Cln3-202ENSMUST00000084589 Frmpd1A2AKB4 1549 aa14.62□□□□□ -0.07
Cln3-202ENSMUST00000084589 Ubl4bQ9CQ84 188 aa14.6□□□□□ -0.07
Cln3-202ENSMUST00000084589 Fmn1Q05860 1466 aa14.6□□□□□ -0.07
Cln3-202ENSMUST00000084589 Rpgrip1Q9EPQ2 1331 aa14.59□□□□□ -0.07
Cln3-202ENSMUST00000084589 Wdr62Q3U3T8 1523 aa14.52□□□□□ -0.09
Cln3-202ENSMUST00000084589 Plekhg3Q4VAC9 1341 aa14.52□□□□□ -0.09
Cln3-202ENSMUST00000084589 Rapgef2Q8CHG7 1496 aa14.5□□□□□ -0.09
Cln3-202ENSMUST00000084589 Npm1Q61937 292 aaKnown RBP14.49□□□□□ -0.09
Cln3-202ENSMUST00000084589 Dnajc5bQ9CQ94 199 aa14.48□□□□□ -0.09
Cln3-202ENSMUST00000084589 Mier1Q5UAK0 511 aa14.46□□□□□ -0.09
Cln3-202ENSMUST00000084589 Top2aQ01320 1528 aaKnown RBP14.45□□□□□ -0.1
Cln3-202ENSMUST00000084589 Cep162Q6ZQ06 1403 aa14.42□□□□□ -0.1
Cln3-202ENSMUST00000084589 PtprkP35822 1457 aa14.38□□□□□ -0.11
Cln3-202ENSMUST00000084589 Unc13aQ4KUS2 1712 aa14.37□□□□□ -0.11
Cln3-202ENSMUST00000084589 Cux2P70298 1426 aa14.37□□□□□ -0.11
Cln3-202ENSMUST00000084589 Phldb1Q6PDH0 1371 aaKnown RBP14.35□□□□□ -0.11
Cln3-202ENSMUST00000084589 Clip1Q922J3 1391 aa14.35□□□□□ -0.11
Cln3-202ENSMUST00000084589 Ccdc18Q640L5 1455 aa14.31□□□□□ -0.12
Cln3-202ENSMUST00000084589 Lmod2Q3UHZ5 550 aa14.3□□□□□ -0.12
Cln3-202ENSMUST00000084589 Lamc3Q9R0B6 1581 aa14.27□□□□□ -0.12
Cln3-202ENSMUST00000084589 TnnQ80Z71 1560 aa14.25□□□□□ -0.13
Cln3-202ENSMUST00000084589 Thoc2B1AZI6 1594 aaKnown RBP14.24□□□□□ -0.13
Cln3-202ENSMUST00000084589 Camsap1A2AHC3 1581 aa14.24□□□□□ -0.13
Cln3-202ENSMUST00000084589 Ppargc1bQ8VHJ7 1014 aa14.21□□□□□ -0.13
Cln3-202ENSMUST00000084589 Baz1bQ9Z277 1479 aa14.2□□□□□ -0.14
Cln3-202ENSMUST00000084589 Arhgap35Q91YM2 1499 aa14.2□□□□□ -0.14
Cln3-202ENSMUST00000084589 Setd5Q5XJV7 1441 aa14.19□□□□□ -0.14
Cln3-202ENSMUST00000084589 Supt5hO55201 1082 aaKnown RBP14.17□□□□□ -0.14
Cln3-202ENSMUST00000084589 Grin2bQ01097 1482 aa14.15□□□□□ -0.14
Cln3-202ENSMUST00000084589 Shroom4Q1W617 1475 aa14.15□□□□□ -0.14
Cln3-202ENSMUST00000084589 Pcgf6Q99NA9 353 aa14.13□□□□□ -0.15
Cln3-202ENSMUST00000084589 LrpprcQ6PB66 1392 aaKnown RBP14.13□□□□□ -0.15
Cln3-202ENSMUST00000084589 Wdr66E9Q743 1299 aa14.11□□□□□ -0.15
Cln3-202ENSMUST00000084589 Fam50aQ9WV03 339 aaKnown RBP14.11□□□□□ -0.15
Cln3-202ENSMUST00000084589 Dhx29Q6PGC1 1365 aaKnown RBP14.1□□□□□ -0.15
Cln3-202ENSMUST00000084589 Eid3Q3V124 375 aa14.09□□□□□ -0.15
Cln3-202ENSMUST00000084589 Eea1Q8BL66 1411 aa14.09□□□□□ -0.15
Cln3-202ENSMUST00000084589 NefmP08553 848 aa14.09□□□□□ -0.15
Cln3-202ENSMUST00000084589 Rad54l2Q99NG0 1466 aa14.08□□□□□ -0.15
Cln3-202ENSMUST00000084589 Duox2A2AQ99 1517 aa14.06□□□□□ -0.16
Cln3-202ENSMUST00000084589 BlmO88700 1416 aa14.06□□□□□ -0.16
Cln3-202ENSMUST00000084589 NrkQ9R0G8 1455 aa14.06□□□□□ -0.16
Cln3-202ENSMUST00000084589 Fam135aQ6NS59 1506 aa14.05□□□□□ -0.16
Cln3-202ENSMUST00000084589 Arap1Q4LDD4 1452 aa14.04□□□□□ -0.16
Cln3-202ENSMUST00000084589 Ube2uB1AUC4 352 aa14.02□□□□□ -0.16
Cln3-202ENSMUST00000084589 PogzQ8BZH4 1409 aaKnown RBP14.01□□□□□ -0.17
Cln3-202ENSMUST00000084589 Eif4g1Q6NZJ6 1600 aaKnown RBP14□□□□□ -0.17
Cln3-202ENSMUST00000084589 Mroh2bQ7M6Y6 1581 aa14□□□□□ -0.17
Cln3-202ENSMUST00000084589 Las1lA2BE28 776 aaKnown RBP13.99□□□□□ -0.17
Cln3-202ENSMUST00000084589 Mrc2Q64449 1479 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms