RNA–Protein interactions for RNA: ENSMUST00000074233.11

Synm-202, Transcript of Synemin, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Synm, Length 7,818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synm-202ENSMUST00000074233 Rhox8Q6VSS7 320 aa24.35■■□□□ 1.49
Synm-202ENSMUST00000074233 Cngb1E1AZ71 1325 aa22.78■■□□□ 1.24
Synm-202ENSMUST00000074233 Pelp1Q9DBD5 1123 aaKnown RBP22.62■■□□□ 1.21
Synm-202ENSMUST00000074233 Rpgrip1Q9EPQ2 1331 aa22.54■■□□□ 1.2
Synm-202ENSMUST00000074233 Ehmt2Q9Z148 1263 aaKnown RBP22.5■■□□□ 1.19
Synm-202ENSMUST00000074233 Las1lA2BE28 776 aaKnown RBP22.39■■□□□ 1.17
Synm-202ENSMUST00000074233 Ube2uB1AUC4 352 aa22.08■■□□□ 1.12
Synm-202ENSMUST00000074233 Wdr66E9Q743 1299 aa22.06■■□□□ 1.12
Synm-202ENSMUST00000074233 Amer1Q7TS75 1132 aa21.86■■□□□ 1.09
Synm-202ENSMUST00000074233 Zeb1Q64318 1117 aa21.68■■□□□ 1.06
Synm-202ENSMUST00000074233 Esf1Q3V1V3 845 aaKnown RBP21.59■■□□□ 1.05
Synm-202ENSMUST00000074233 Ccdc136Q3TVA9 1136 aa21.41■■□□□ 1.02
Synm-202ENSMUST00000074233 4930567H17RikQ3V0K5 233 aa21.4■■□□□ 1.02
Synm-202ENSMUST00000074233 Gab3Q8BSM5 595 aa21.31■■□□□ 1
Synm-202ENSMUST00000074233 Npm2Q80W85 207 aa21.26■□□□□ 0.99
Synm-202ENSMUST00000074233 Myt1lP97500 1187 aa21.16■□□□□ 0.98
Synm-202ENSMUST00000074233 Slc24a1Q91WD8 1130 aa21.11■□□□□ 0.97
Synm-202ENSMUST00000074233 CenpbP27790 599 aa21.11■□□□□ 0.97
Synm-202ENSMUST00000074233 Stra8P70278 393 aa21■□□□□ 0.95
Synm-202ENSMUST00000074233 Ttbk1Q6PCN3 1308 aa20.97■□□□□ 0.95
Synm-202ENSMUST00000074233 4933416C03RikQ3V063 378 aa20.68■□□□□ 0.9
Synm-202ENSMUST00000074233 UbtfP25976 765 aaKnown RBP20.64■□□□□ 0.9
Synm-202ENSMUST00000074233 Trim41Q5NCC3 630 aa20.62■□□□□ 0.89
Synm-202ENSMUST00000074233 NeflP08551 543 aa20.44■□□□□ 0.86
Synm-202ENSMUST00000074233 NefmP08553 848 aa20.42■□□□□ 0.86
Synm-202ENSMUST00000074233 Anp32bQ9EST5 272 aaKnown RBP20.39■□□□□ 0.85
Synm-202ENSMUST00000074233 Neurod1Q60867 357 aa20.33■□□□□ 0.84
Synm-202ENSMUST00000074233 Eif5bQ05D44 1216 aaKnown RBP20.31■□□□□ 0.84
Synm-202ENSMUST00000074233 NrdcQ8BHG1 1161 aa20.29■□□□□ 0.84
Synm-202ENSMUST00000074233 Os9Q8K2C7 672 aa20.28■□□□□ 0.84
Synm-202ENSMUST00000074233 Myt1Q8CFC2 1127 aa20.25■□□□□ 0.83
Synm-202ENSMUST00000074233 Il27Q8K3I6 234 aa20.15■□□□□ 0.82
Synm-202ENSMUST00000074233 Rtl1Q7M732 1744 aa20.14■□□□□ 0.82
Synm-202ENSMUST00000074233 Cdk11bP24788 784 aaKnown RBP20.14■□□□□ 0.81
Synm-202ENSMUST00000074233 Tnnt3Q9QZ47 272 aa20.11■□□□□ 0.81
Synm-202ENSMUST00000074233 Acin1Q9JIX8 1338 aaKnown RBP20.11■□□□□ 0.81
Synm-202ENSMUST00000074233 Ppargc1bQ8VHJ7 1014 aa20.07■□□□□ 0.8
Synm-202ENSMUST00000074233 Ap3b1Q9Z1T1 1105 aa20.06■□□□□ 0.8
Synm-202ENSMUST00000074233 Fam50aQ9WV03 339 aaKnown RBP20.05■□□□□ 0.8
Synm-202ENSMUST00000074233 HrcG5E8J6 738 aa20.03■□□□□ 0.8
Synm-202ENSMUST00000074233 NclP09405 707 aaKnown RBP20■□□□□ 0.79
Synm-202ENSMUST00000074233 Ccdc180J3QNE4 1664 aa19.99■□□□□ 0.79
Synm-202ENSMUST00000074233 Rtl5Q5DTT4 599 aa19.89■□□□□ 0.78
Synm-202ENSMUST00000074233 Chic1Q8CBW7 227 aa19.89■□□□□ 0.77
Synm-202ENSMUST00000074233 Zbtb7cQ8VCZ7 619 aa19.81■□□□□ 0.76
Synm-202ENSMUST00000074233 Nop58Q6DFW4 536 aaKnown RBP19.79■□□□□ 0.76
Synm-202ENSMUST00000074233 Gm13697A2AK42 830 aa19.61■□□□□ 0.73
Synm-202ENSMUST00000074233 DaxxO35613 739 aa19.6■□□□□ 0.73
Synm-202ENSMUST00000074233 CatipB9EKE5 520 aa19.58■□□□□ 0.73
Synm-202ENSMUST00000074233 Zbtb4Q5F293 982 aa19.57■□□□□ 0.72
Synm-202ENSMUST00000074233 ArxO35085 564 aa19.55■□□□□ 0.72
Synm-202ENSMUST00000074233 Pcgf6Q99NA9 353 aa19.54■□□□□ 0.72
Synm-202ENSMUST00000074233 Prdm10Q3UTQ7 1184 aa19.53■□□□□ 0.72
Synm-202ENSMUST00000074233 Hnrnpul2Q00PI9 745 aaKnown RBP19.52■□□□□ 0.72
Synm-202ENSMUST00000074233 Polr3glQ8R0C0 218 aa19.5■□□□□ 0.71
Synm-202ENSMUST00000074233 Atp1b4Q99ME6 356 aa19.49■□□□□ 0.71
Synm-202ENSMUST00000074233 Ifnlr1Q8CGK5 535 aa19.49■□□□□ 0.71
Synm-202ENSMUST00000074233 DiexfQ8BTT6 772 aaKnown RBP19.46■□□□□ 0.71
Synm-202ENSMUST00000074233 TonslQ6NZL6 1363 aa19.46■□□□□ 0.71
Synm-202ENSMUST00000074233 Plppr3Q7TPB0 716 aa19.38■□□□□ 0.69
Synm-202ENSMUST00000074233 NischQ80TM9 1593 aa19.37■□□□□ 0.69
Synm-202ENSMUST00000074233 Erich6D3Z6S9 713 aa19.36■□□□□ 0.69
Synm-202ENSMUST00000074233 Nlrp6Q91WS2 869 aa19.36■□□□□ 0.69
Synm-202ENSMUST00000074233 Rangap1P46061 589 aaKnown RBP19.31■□□□□ 0.68
Synm-202ENSMUST00000074233 Ythdc1E9Q5K9 736 aaKnown RBP19.3■□□□□ 0.68
Synm-202ENSMUST00000074233 Supt5hO55201 1082 aaKnown RBP19.28■□□□□ 0.68
Synm-202ENSMUST00000074233 Gm13695A2AK44 830 aa19.26■□□□□ 0.67
Synm-202ENSMUST00000074233 Anp32aO35381 247 aa19.26■□□□□ 0.67
Synm-202ENSMUST00000074233 Upf2A2AT37 1269 aaKnown RBP19.25■□□□□ 0.67
Synm-202ENSMUST00000074233 Hsp90aa1P07901 733 aaKnown RBP19.23■□□□□ 0.67
Synm-202ENSMUST00000074233 Lmod3E9QA62 571 aa19.2■□□□□ 0.66
Synm-202ENSMUST00000074233 Lmod2Q3UHZ5 550 aa19.2■□□□□ 0.66
Synm-202ENSMUST00000074233 Mapk8ip2Q9ERE9 830 aa19.18■□□□□ 0.66
Synm-202ENSMUST00000074233 Csrnp3P59055 597 aa19.14■□□□□ 0.65
Synm-202ENSMUST00000074233 Hdac5Q9Z2V6 1113 aa19.07■□□□□ 0.64
Synm-202ENSMUST00000074233 Gm38655A0A286YDK6 273 aa19.03■□□□□ 0.64
Synm-202ENSMUST00000074233 Gm35339A0A140LHH9 1649 aa19.02■□□□□ 0.64
Synm-202ENSMUST00000074233 Mier1Q5UAK0 511 aa19.01■□□□□ 0.63
Synm-202ENSMUST00000074233 Plekhg3Q4VAC9 1341 aa18.99■□□□□ 0.63
Synm-202ENSMUST00000074233 Vsig10D3YX43 558 aa18.98■□□□□ 0.63
Synm-202ENSMUST00000074233 Zcchc6Q5BLK4 1491 aaKnown RBP18.96■□□□□ 0.63
Synm-202ENSMUST00000074233 Fkbp15Q6P9Q6 1216 aaKnown RBP18.91■□□□□ 0.62
Synm-202ENSMUST00000074233 ClspnQ80YR7 1315 aa18.89■□□□□ 0.61
Synm-202ENSMUST00000074233 DekQ7TNV0 380 aaKnown RBP18.87■□□□□ 0.61
Synm-202ENSMUST00000074233 Npm1Q61937 292 aaKnown RBP18.85■□□□□ 0.61
Synm-202ENSMUST00000074233 Znf326O88291 580 aa18.82■□□□□ 0.6
Synm-202ENSMUST00000074233 Trim44Q9QXA7 346 aa18.79■□□□□ 0.6
Synm-202ENSMUST00000074233 Rad21Q61550 635 aaKnown RBP18.78■□□□□ 0.6
Synm-202ENSMUST00000074233 Eid3Q3V124 375 aa18.75■□□□□ 0.59
Synm-202ENSMUST00000074233 Irx6Q9ER75 438 aa18.72■□□□□ 0.59
Synm-202ENSMUST00000074233 Ppp4r2Q0VGB7 417 aa18.71■□□□□ 0.59
Synm-202ENSMUST00000074233 Fgd1P52734 960 aa18.7■□□□□ 0.58
Synm-202ENSMUST00000074233 Abcc9P70170 1546 aa18.69■□□□□ 0.58
Synm-202ENSMUST00000074233 Trim26Q99PN3 545 aa18.68■□□□□ 0.58
Synm-202ENSMUST00000074233 P3h3Q8CG70 732 aa18.61■□□□□ 0.57
Synm-202ENSMUST00000074233 Safb2Q80YR5 991 aaKnown RBP18.6■□□□□ 0.57
Synm-202ENSMUST00000074233 Arid4bA2CG63 1314 aaKnown RBP18.6■□□□□ 0.57
Synm-202ENSMUST00000074233 Calr4Q3TQS0 420 aa18.58■□□□□ 0.56
Synm-202ENSMUST00000074233 Ccdc9Q8VC31 543 aaKnown RBP18.58■□□□□ 0.56
Synm-202ENSMUST00000074233 Clstn1Q9EPL2 979 aa18.56■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 103.9 ms