RNA–Protein interactions for RNA: ENSMUST00000074233.11

Synm-202, Transcript of Synemin, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Synm, Length 7,818 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synm-202ENSMUST00000074233 Rhox8Q6VSS7 320 aa24.35■■□□□ 1.49
Synm-202ENSMUST00000074233 Cngb1E1AZ71 1325 aa22.78■■□□□ 1.24
Synm-202ENSMUST00000074233 Pelp1Q9DBD5 1123 aaKnown RBP22.62■■□□□ 1.21
Synm-202ENSMUST00000074233 Rpgrip1Q9EPQ2 1331 aa22.54■■□□□ 1.2
Synm-202ENSMUST00000074233 Ehmt2Q9Z148 1263 aaKnown RBP22.5■■□□□ 1.19
Synm-202ENSMUST00000074233 Las1lA2BE28 776 aaKnown RBP22.39■■□□□ 1.17
Synm-202ENSMUST00000074233 Ube2uB1AUC4 352 aa22.08■■□□□ 1.12
Synm-202ENSMUST00000074233 Wdr66E9Q743 1299 aa22.06■■□□□ 1.12
Synm-202ENSMUST00000074233 Amer1Q7TS75 1132 aa21.86■■□□□ 1.09
Synm-202ENSMUST00000074233 Zeb1Q64318 1117 aa21.68■■□□□ 1.06
Synm-202ENSMUST00000074233 Esf1Q3V1V3 845 aaKnown RBP21.59■■□□□ 1.05
Synm-202ENSMUST00000074233 Ccdc136Q3TVA9 1136 aa21.41■■□□□ 1.02
Synm-202ENSMUST00000074233 4930567H17RikQ3V0K5 233 aa21.4■■□□□ 1.02
Synm-202ENSMUST00000074233 Gab3Q8BSM5 595 aa21.31■■□□□ 1
Synm-202ENSMUST00000074233 Npm2Q80W85 207 aa21.26■□□□□ 0.99
Synm-202ENSMUST00000074233 Myt1lP97500 1187 aa21.16■□□□□ 0.98
Synm-202ENSMUST00000074233 Slc24a1Q91WD8 1130 aa21.11■□□□□ 0.97
Synm-202ENSMUST00000074233 CenpbP27790 599 aa21.11■□□□□ 0.97
Synm-202ENSMUST00000074233 Stra8P70278 393 aa21■□□□□ 0.95
Synm-202ENSMUST00000074233 Ttbk1Q6PCN3 1308 aa20.97■□□□□ 0.95
Synm-202ENSMUST00000074233 4933416C03RikQ3V063 378 aa20.68■□□□□ 0.9
Synm-202ENSMUST00000074233 UbtfP25976 765 aaKnown RBP20.64■□□□□ 0.9
Synm-202ENSMUST00000074233 Trim41Q5NCC3 630 aa20.62■□□□□ 0.89
Synm-202ENSMUST00000074233 NeflP08551 543 aa20.44■□□□□ 0.86
Synm-202ENSMUST00000074233 NefmP08553 848 aa20.42■□□□□ 0.86
Synm-202ENSMUST00000074233 Anp32bQ9EST5 272 aaKnown RBP20.39■□□□□ 0.85
Synm-202ENSMUST00000074233 Neurod1Q60867 357 aa20.33■□□□□ 0.84
Synm-202ENSMUST00000074233 Eif5bQ05D44 1216 aaKnown RBP20.31■□□□□ 0.84
Synm-202ENSMUST00000074233 NrdcQ8BHG1 1161 aa20.29■□□□□ 0.84
Synm-202ENSMUST00000074233 Os9Q8K2C7 672 aa20.28■□□□□ 0.84
Synm-202ENSMUST00000074233 Myt1Q8CFC2 1127 aa20.25■□□□□ 0.83
Synm-202ENSMUST00000074233 Il27Q8K3I6 234 aa20.15■□□□□ 0.82
Synm-202ENSMUST00000074233 Rtl1Q7M732 1744 aa20.14■□□□□ 0.82
Synm-202ENSMUST00000074233 Cdk11bP24788 784 aaKnown RBP20.14■□□□□ 0.81
Synm-202ENSMUST00000074233 Tnnt3Q9QZ47 272 aa20.11■□□□□ 0.81
Synm-202ENSMUST00000074233 Acin1Q9JIX8 1338 aaKnown RBP20.11■□□□□ 0.81
Synm-202ENSMUST00000074233 Ppargc1bQ8VHJ7 1014 aa20.07■□□□□ 0.8
Synm-202ENSMUST00000074233 Ap3b1Q9Z1T1 1105 aa20.06■□□□□ 0.8
Synm-202ENSMUST00000074233 Fam50aQ9WV03 339 aaKnown RBP20.05■□□□□ 0.8
Synm-202ENSMUST00000074233 HrcG5E8J6 738 aa20.03■□□□□ 0.8
Synm-202ENSMUST00000074233 NclP09405 707 aaKnown RBP20■□□□□ 0.79
Synm-202ENSMUST00000074233 Ccdc180J3QNE4 1664 aa19.99■□□□□ 0.79
Synm-202ENSMUST00000074233 Rtl5Q5DTT4 599 aa19.89■□□□□ 0.78
Synm-202ENSMUST00000074233 Chic1Q8CBW7 227 aa19.89■□□□□ 0.77
Synm-202ENSMUST00000074233 Zbtb7cQ8VCZ7 619 aa19.81■□□□□ 0.76
Synm-202ENSMUST00000074233 Nop58Q6DFW4 536 aaKnown RBP19.79■□□□□ 0.76
Synm-202ENSMUST00000074233 Gm13697A2AK42 830 aa19.61■□□□□ 0.73
Synm-202ENSMUST00000074233 DaxxO35613 739 aa19.6■□□□□ 0.73
Synm-202ENSMUST00000074233 CatipB9EKE5 520 aa19.58■□□□□ 0.73
Synm-202ENSMUST00000074233 Zbtb4Q5F293 982 aa19.57■□□□□ 0.72
Synm-202ENSMUST00000074233 ArxO35085 564 aa19.55■□□□□ 0.72
Synm-202ENSMUST00000074233 Pcgf6Q99NA9 353 aa19.54■□□□□ 0.72
Synm-202ENSMUST00000074233 Prdm10Q3UTQ7 1184 aa19.53■□□□□ 0.72
Synm-202ENSMUST00000074233 Hnrnpul2Q00PI9 745 aaKnown RBP19.52■□□□□ 0.72
Synm-202ENSMUST00000074233 Polr3glQ8R0C0 218 aa19.5■□□□□ 0.71
Synm-202ENSMUST00000074233 Atp1b4Q99ME6 356 aa19.49■□□□□ 0.71
Synm-202ENSMUST00000074233 Ifnlr1Q8CGK5 535 aa19.49■□□□□ 0.71
Synm-202ENSMUST00000074233 DiexfQ8BTT6 772 aaKnown RBP19.46■□□□□ 0.71
Synm-202ENSMUST00000074233 TonslQ6NZL6 1363 aa19.46■□□□□ 0.71
Synm-202ENSMUST00000074233 Plppr3Q7TPB0 716 aa19.38■□□□□ 0.69
Synm-202ENSMUST00000074233 NischQ80TM9 1593 aa19.37■□□□□ 0.69
Synm-202ENSMUST00000074233 Erich6D3Z6S9 713 aa19.36■□□□□ 0.69
Synm-202ENSMUST00000074233 Nlrp6Q91WS2 869 aa19.36■□□□□ 0.69
Synm-202ENSMUST00000074233 Rangap1P46061 589 aaKnown RBP19.31■□□□□ 0.68
Synm-202ENSMUST00000074233 Ythdc1E9Q5K9 736 aaKnown RBP19.3■□□□□ 0.68
Synm-202ENSMUST00000074233 Supt5hO55201 1082 aaKnown RBP19.28■□□□□ 0.68
Synm-202ENSMUST00000074233 Gm13695A2AK44 830 aa19.26■□□□□ 0.67
Synm-202ENSMUST00000074233 Anp32aO35381 247 aa19.26■□□□□ 0.67
Synm-202ENSMUST00000074233 Upf2A2AT37 1269 aaKnown RBP19.25■□□□□ 0.67
Synm-202ENSMUST00000074233 Hsp90aa1P07901 733 aaKnown RBP19.23■□□□□ 0.67
Synm-202ENSMUST00000074233 Lmod3E9QA62 571 aa19.2■□□□□ 0.66
Synm-202ENSMUST00000074233 Lmod2Q3UHZ5 550 aa19.2■□□□□ 0.66
Synm-202ENSMUST00000074233 Mapk8ip2Q9ERE9 830 aa19.18■□□□□ 0.66
Synm-202ENSMUST00000074233 Csrnp3P59055 597 aa19.14■□□□□ 0.65
Synm-202ENSMUST00000074233 Hdac5Q9Z2V6 1113 aa19.07■□□□□ 0.64
Synm-202ENSMUST00000074233 Gm38655A0A286YDK6 273 aa19.03■□□□□ 0.64
Synm-202ENSMUST00000074233 Gm35339A0A140LHH9 1649 aa19.02■□□□□ 0.64
Synm-202ENSMUST00000074233 Mier1Q5UAK0 511 aa19.01■□□□□ 0.63
Synm-202ENSMUST00000074233 Plekhg3Q4VAC9 1341 aa18.99■□□□□ 0.63
Synm-202ENSMUST00000074233 Vsig10D3YX43 558 aa18.98■□□□□ 0.63
Synm-202ENSMUST00000074233 Zcchc6Q5BLK4 1491 aaKnown RBP18.96■□□□□ 0.63
Synm-202ENSMUST00000074233 Fkbp15Q6P9Q6 1216 aaKnown RBP18.91■□□□□ 0.62
Synm-202ENSMUST00000074233 ClspnQ80YR7 1315 aa18.89■□□□□ 0.61
Synm-202ENSMUST00000074233 DekQ7TNV0 380 aaKnown RBP18.87■□□□□ 0.61
Synm-202ENSMUST00000074233 Npm1Q61937 292 aaKnown RBP18.85■□□□□ 0.61
Synm-202ENSMUST00000074233 Znf326O88291 580 aa18.82■□□□□ 0.6
Synm-202ENSMUST00000074233 Trim44Q9QXA7 346 aa18.79■□□□□ 0.6
Synm-202ENSMUST00000074233 Rad21Q61550 635 aaKnown RBP18.78■□□□□ 0.6
Synm-202ENSMUST00000074233 Eid3Q3V124 375 aa18.75■□□□□ 0.59
Synm-202ENSMUST00000074233 Irx6Q9ER75 438 aa18.72■□□□□ 0.59
Synm-202ENSMUST00000074233 Ppp4r2Q0VGB7 417 aa18.71■□□□□ 0.59
Synm-202ENSMUST00000074233 Fgd1P52734 960 aa18.7■□□□□ 0.58
Synm-202ENSMUST00000074233 Abcc9P70170 1546 aa18.69■□□□□ 0.58
Synm-202ENSMUST00000074233 Trim26Q99PN3 545 aa18.68■□□□□ 0.58
Synm-202ENSMUST00000074233 P3h3Q8CG70 732 aa18.61■□□□□ 0.57
Synm-202ENSMUST00000074233 Safb2Q80YR5 991 aaKnown RBP18.6■□□□□ 0.57
Synm-202ENSMUST00000074233 Arid4bA2CG63 1314 aaKnown RBP18.6■□□□□ 0.57
Synm-202ENSMUST00000074233 Calr4Q3TQS0 420 aa18.58■□□□□ 0.56
Synm-202ENSMUST00000074233 Ccdc9Q8VC31 543 aaKnown RBP18.58■□□□□ 0.56
Synm-202ENSMUST00000074233 Clstn1Q9EPL2 979 aa18.56■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms