RNA–Protein interactions for RNA: ENSMUST00000065196.12

Scn5a-201, Transcript of Sodium channel protein type 5 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn5a, Length 8,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5a-201ENSMUST00000065196 Rhox8Q6VSS7 320 aa20.35■□□□□ 0.85
Scn5a-201ENSMUST00000065196 Rpgrip1Q9EPQ2 1331 aa19.33■□□□□ 0.69
Scn5a-201ENSMUST00000065196 Cngb1E1AZ71 1325 aa19.32■□□□□ 0.68
Scn5a-201ENSMUST00000065196 Pelp1Q9DBD5 1123 aaKnown RBP19.2■□□□□ 0.66
Scn5a-201ENSMUST00000065196 Las1lA2BE28 776 aaKnown RBP18.87■□□□□ 0.61
Scn5a-201ENSMUST00000065196 Wdr66E9Q743 1299 aa18.48■□□□□ 0.55
Scn5a-201ENSMUST00000065196 Ube2uB1AUC4 352 aa18.4■□□□□ 0.54
Scn5a-201ENSMUST00000065196 Esf1Q3V1V3 845 aaKnown RBP18.3■□□□□ 0.52
Scn5a-201ENSMUST00000065196 Rtl1Q7M732 1744 aa18.22■□□□□ 0.51
Scn5a-201ENSMUST00000065196 Zeb1Q64318 1117 aa18.13■□□□□ 0.49
Scn5a-201ENSMUST00000065196 Stra8P70278 393 aa18.05■□□□□ 0.48
Scn5a-201ENSMUST00000065196 Npm2Q80W85 207 aa17.98■□□□□ 0.47
Scn5a-201ENSMUST00000065196 4930567H17RikQ3V0K5 233 aa17.94■□□□□ 0.46
Scn5a-201ENSMUST00000065196 Trim41Q5NCC3 630 aa17.91■□□□□ 0.46
Scn5a-201ENSMUST00000065196 Amer1Q7TS75 1132 aa17.86■□□□□ 0.45
Scn5a-201ENSMUST00000065196 Ehmt2Q9Z148 1263 aaKnown RBP17.73■□□□□ 0.43
Scn5a-201ENSMUST00000065196 Ccdc180J3QNE4 1664 aa17.7■□□□□ 0.42
Scn5a-201ENSMUST00000065196 Ccdc136Q3TVA9 1136 aa17.7■□□□□ 0.42
Scn5a-201ENSMUST00000065196 CenpbP27790 599 aa17.64■□□□□ 0.41
Scn5a-201ENSMUST00000065196 Anp32bQ9EST5 272 aaKnown RBP17.52■□□□□ 0.4
Scn5a-201ENSMUST00000065196 Myt1lP97500 1187 aa17.52■□□□□ 0.39
Scn5a-201ENSMUST00000065196 NefmP08553 848 aa17.48■□□□□ 0.39
Scn5a-201ENSMUST00000065196 Gab3Q8BSM5 595 aa17.43■□□□□ 0.38
Scn5a-201ENSMUST00000065196 NischQ80TM9 1593 aa17.36■□□□□ 0.37
Scn5a-201ENSMUST00000065196 NeflP08551 543 aa17.35■□□□□ 0.37
Scn5a-201ENSMUST00000065196 Myt1Q8CFC2 1127 aa17.23■□□□□ 0.35
Scn5a-201ENSMUST00000065196 NrdcQ8BHG1 1161 aa17.18■□□□□ 0.34
Scn5a-201ENSMUST00000065196 Tnnt3Q9QZ47 272 aa17.15■□□□□ 0.34
Scn5a-201ENSMUST00000065196 Slc24a1Q91WD8 1130 aa17.1■□□□□ 0.33
Scn5a-201ENSMUST00000065196 4933416C03RikQ3V063 378 aa17.08■□□□□ 0.32
Scn5a-201ENSMUST00000065196 UbtfP25976 765 aaKnown RBP17.05■□□□□ 0.32
Scn5a-201ENSMUST00000065196 Os9Q8K2C7 672 aa17.04■□□□□ 0.32
Scn5a-201ENSMUST00000065196 Rtl5Q5DTT4 599 aa16.98■□□□□ 0.31
Scn5a-201ENSMUST00000065196 Acin1Q9JIX8 1338 aaKnown RBP16.96■□□□□ 0.31
Scn5a-201ENSMUST00000065196 NclP09405 707 aaKnown RBP16.93■□□□□ 0.3
Scn5a-201ENSMUST00000065196 Hdac5Q9Z2V6 1113 aa16.88■□□□□ 0.29
Scn5a-201ENSMUST00000065196 Cdk11bP24788 784 aaKnown RBP16.87■□□□□ 0.29
Scn5a-201ENSMUST00000065196 Ttbk1Q6PCN3 1308 aa16.79■□□□□ 0.28
Scn5a-201ENSMUST00000065196 HrcG5E8J6 738 aa16.77■□□□□ 0.28
Scn5a-201ENSMUST00000065196 Fam50aQ9WV03 339 aaKnown RBP16.73■□□□□ 0.27
Scn5a-201ENSMUST00000065196 Il27Q8K3I6 234 aa16.71■□□□□ 0.27
Scn5a-201ENSMUST00000065196 DiexfQ8BTT6 772 aaKnown RBP16.63■□□□□ 0.25
Scn5a-201ENSMUST00000065196 Neurod1Q60867 357 aa16.62■□□□□ 0.25
Scn5a-201ENSMUST00000065196 Gm13697A2AK42 830 aa16.6■□□□□ 0.25
Scn5a-201ENSMUST00000065196 Eif5bQ05D44 1216 aaKnown RBP16.56■□□□□ 0.24
Scn5a-201ENSMUST00000065196 Nop58Q6DFW4 536 aaKnown RBP16.53■□□□□ 0.24
Scn5a-201ENSMUST00000065196 TonslQ6NZL6 1363 aa16.49■□□□□ 0.23
Scn5a-201ENSMUST00000065196 Zcchc6Q5BLK4 1491 aaKnown RBP16.44■□□□□ 0.22
Scn5a-201ENSMUST00000065196 Nlrp6Q91WS2 869 aa16.4■□□□□ 0.22
Scn5a-201ENSMUST00000065196 Ap3b1Q9Z1T1 1105 aa16.39■□□□□ 0.21
Scn5a-201ENSMUST00000065196 Gm13695A2AK44 830 aa16.32■□□□□ 0.2
Scn5a-201ENSMUST00000065196 Npm1Q61937 292 aaKnown RBP16.3■□□□□ 0.2
Scn5a-201ENSMUST00000065196 Hsp90aa1P07901 733 aaKnown RBP16.29■□□□□ 0.2
Scn5a-201ENSMUST00000065196 Hnrnpul2Q00PI9 745 aaKnown RBP16.28■□□□□ 0.2
Scn5a-201ENSMUST00000065196 Atp1b4Q99ME6 356 aa16.28■□□□□ 0.2
Scn5a-201ENSMUST00000065196 CatipB9EKE5 520 aa16.24■□□□□ 0.19
Scn5a-201ENSMUST00000065196 DaxxO35613 739 aa16.2■□□□□ 0.18
Scn5a-201ENSMUST00000065196 Anp32aO35381 247 aa16.19■□□□□ 0.18
Scn5a-201ENSMUST00000065196 Upf2A2AT37 1269 aaKnown RBP16.18■□□□□ 0.18
Scn5a-201ENSMUST00000065196 Gm35339A0A140LHH9 1649 aa16.12■□□□□ 0.17
Scn5a-201ENSMUST00000065196 Pcgf6Q99NA9 353 aa16.12■□□□□ 0.17
Scn5a-201ENSMUST00000065196 Abcc9P70170 1546 aa16.11■□□□□ 0.17
Scn5a-201ENSMUST00000065196 Erich6D3Z6S9 713 aa16.11■□□□□ 0.17
Scn5a-201ENSMUST00000065196 Chic1Q8CBW7 227 aa16.09■□□□□ 0.17
Scn5a-201ENSMUST00000065196 Polr3glQ8R0C0 218 aa16.06■□□□□ 0.16
Scn5a-201ENSMUST00000065196 Ccer2J3QPU5 274 aa16.05■□□□□ 0.16
Scn5a-201ENSMUST00000065196 Zbtb7cQ8VCZ7 619 aa16.05■□□□□ 0.16
Scn5a-201ENSMUST00000065196 Ythdc1E9Q5K9 736 aaKnown RBP16.04■□□□□ 0.16
Scn5a-201ENSMUST00000065196 ClspnQ80YR7 1315 aa16.03■□□□□ 0.16
Scn5a-201ENSMUST00000065196 Znf326O88291 580 aa16.01■□□□□ 0.15
Scn5a-201ENSMUST00000065196 Clstn2Q9ER65 966 aa15.93■□□□□ 0.14
Scn5a-201ENSMUST00000065196 Ccdc9Q8VC31 543 aaKnown RBP15.92■□□□□ 0.14
Scn5a-201ENSMUST00000065196 Ifnlr1Q8CGK5 535 aa15.88■□□□□ 0.13
Scn5a-201ENSMUST00000065196 Safb2Q80YR5 991 aaKnown RBP15.87■□□□□ 0.13
Scn5a-201ENSMUST00000065196 Brd4Q9ESU6 1400 aaKnown RBP15.86■□□□□ 0.13
Scn5a-201ENSMUST00000065196 Zfp777B9EKF4 885 aa15.85■□□□□ 0.13
Scn5a-201ENSMUST00000065196 Lmod2Q3UHZ5 550 aa15.83■□□□□ 0.12
Scn5a-201ENSMUST00000065196 Fgd1P52734 960 aa15.83■□□□□ 0.12
Scn5a-201ENSMUST00000065196 Mier1Q5UAK0 511 aa15.81■□□□□ 0.12
Scn5a-201ENSMUST00000065196 Supt5hO55201 1082 aaKnown RBP15.79■□□□□ 0.12
Scn5a-201ENSMUST00000065196 Adam1bQ8R534 806 aa15.78■□□□□ 0.12
Scn5a-201ENSMUST00000065196 Trim44Q9QXA7 346 aa15.78■□□□□ 0.12
Scn5a-201ENSMUST00000065196 Chmp4bQ9D8B3 224 aaKnown RBP15.72■□□□□ 0.11
Scn5a-201ENSMUST00000065196 Plekhg3Q4VAC9 1341 aa15.71■□□□□ 0.11
Scn5a-201ENSMUST00000065196 PnnO35691 725 aaKnown RBP15.69■□□□□ 0.1
Scn5a-201ENSMUST00000065196 Zbtb4Q5F293 982 aa15.69■□□□□ 0.1
Scn5a-201ENSMUST00000065196 DekQ7TNV0 380 aaKnown RBP15.68■□□□□ 0.1
Scn5a-201ENSMUST00000065196 Prdm10Q3UTQ7 1184 aa15.68■□□□□ 0.1
Scn5a-201ENSMUST00000065196 ArxO35085 564 aa15.67■□□□□ 0.1
Scn5a-201ENSMUST00000065196 Ppargc1bQ8VHJ7 1014 aa15.65■□□□□ 0.1
Scn5a-201ENSMUST00000065196 Clip1Q922J3 1391 aa15.65■□□□□ 0.1
Scn5a-201ENSMUST00000065196 Eif4g2Q62448 906 aaKnown RBP15.63■□□□□ 0.09
Scn5a-201ENSMUST00000065196 IqubQ8CDK3 788 aa15.61■□□□□ 0.09
Scn5a-201ENSMUST00000065196 Plppr3Q7TPB0 716 aa15.6■□□□□ 0.09
Scn5a-201ENSMUST00000065196 Lmod3E9QA62 571 aa15.57■□□□□ 0.08
Scn5a-201ENSMUST00000065196 Rb1cc1Q9ESK9 1588 aa15.57■□□□□ 0.08
Scn5a-201ENSMUST00000065196 Htatsf1Q8BGC0 757 aa15.56■□□□□ 0.08
Scn5a-201ENSMUST00000065196 Calr4Q3TQS0 420 aa15.55■□□□□ 0.08
Scn5a-201ENSMUST00000065196 Iqcf3Q9D498 203 aa15.54■□□□□ 0.08
Scn5a-201ENSMUST00000065196 PtmaP26350 111 aa15.53■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms