RNA–Protein interactions for RNA: ENSMUST00000060956.12

Trappc1-201, Transcript of Trafficking protein particle complex subunit 1, mousemouse

TSL 3 BASIC

Gene Trappc1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc1-201ENSMUST00000060956 Chic1Q8CBW7 227 aa19.62■□□□□ 0.73
Trappc1-201ENSMUST00000060956 Mapk8ip2Q9ERE9 830 aa19.08■□□□□ 0.64
Trappc1-201ENSMUST00000060956 Phf23Q8BSN5 401 aa17.52■□□□□ 0.4
Trappc1-201ENSMUST00000060956 Plppr3Q7TPB0 716 aa17.01■□□□□ 0.31
Trappc1-201ENSMUST00000060956 Gab3Q8BSM5 595 aa16.91■□□□□ 0.3
Trappc1-201ENSMUST00000060956 Senp3Q9EP97 568 aaKnown RBP16.1■□□□□ 0.17
Trappc1-201ENSMUST00000060956 Kcna4Q61423 654 aa15.39■□□□□ 0.05
Trappc1-201ENSMUST00000060956 Trap1aP19473 224 aa14.35□□□□□ -0.11
Trappc1-201ENSMUST00000060956 Fam163aQ8CAA5 168 aa14.22□□□□□ -0.13
Trappc1-201ENSMUST00000060956 Hoxd11P23813 323 aa14.21□□□□□ -0.13
Trappc1-201ENSMUST00000060956 Dmrt2Q8BG36 561 aa13.77□□□□□ -0.21
Trappc1-201ENSMUST00000060956 Znf219Q6IQX8 726 aa13.74□□□□□ -0.21
Trappc1-201ENSMUST00000060956 Chrna2Q91X60 512 aa13.59□□□□□ -0.23
Trappc1-201ENSMUST00000060956 Rsph4aQ8BYM7 716 aa13.49□□□□□ -0.25
Trappc1-201ENSMUST00000060956 Ppargc1bQ8VHJ7 1014 aa13.48□□□□□ -0.25
Trappc1-201ENSMUST00000060956 Slc4a1apE9PX68 744 aa13.31□□□□□ -0.28
Trappc1-201ENSMUST00000060956 ArsiQ32KI9 573 aa13.22□□□□□ -0.29
Trappc1-201ENSMUST00000060956 Rimbp2Q80U40 1072 aa13.21□□□□□ -0.29
Trappc1-201ENSMUST00000060956 Dnajc5bQ9CQ94 199 aa13.16□□□□□ -0.3
Trappc1-201ENSMUST00000060956 Gm35339A0A140LHH9 1649 aa13.1□□□□□ -0.31
Trappc1-201ENSMUST00000060956 Ppp4r2Q0VGB7 417 aa13.09□□□□□ -0.31
Trappc1-201ENSMUST00000060956 Hs6st3Q9QYK4 470 aa13.04□□□□□ -0.32
Trappc1-201ENSMUST00000060956 Atf5O70191 283 aa13□□□□□ -0.33
Trappc1-201ENSMUST00000060956 Akt1s1Q9D1F4 257 aa12.98□□□□□ -0.33
Trappc1-201ENSMUST00000060956 Abcc9P70170 1546 aa12.88□□□□□ -0.35
Trappc1-201ENSMUST00000060956 NischQ80TM9 1593 aa12.78□□□□□ -0.36
Trappc1-201ENSMUST00000060956 Slc34a2Q9DBP0 697 aa12.72□□□□□ -0.37
Trappc1-201ENSMUST00000060956 1700123L14RikQ3V2K7 440 aa12.71□□□□□ -0.37
Trappc1-201ENSMUST00000060956 Abcc8B2RUS7 1588 aa12.52□□□□□ -0.4
Trappc1-201ENSMUST00000060956 Bach1P97302 739 aa12.51□□□□□ -0.41
Trappc1-201ENSMUST00000060956 Sox12Q04890 314 aa12.51□□□□□ -0.41
Trappc1-201ENSMUST00000060956 ScribQ80U72 1612 aa12.4□□□□□ -0.42
Trappc1-201ENSMUST00000060956 WdpcpQ8C456 722 aa12.27□□□□□ -0.45
Trappc1-201ENSMUST00000060956 Fam71e1A1L3C1 212 aa12.1□□□□□ -0.47
Trappc1-201ENSMUST00000060956 Nlrp6Q91WS2 869 aa12.05□□□□□ -0.48
Trappc1-201ENSMUST00000060956 Cdca7Q9D0M2 382 aa12.05□□□□□ -0.48
Trappc1-201ENSMUST00000060956 Ifnlr1Q8CGK5 535 aa12.03□□□□□ -0.48
Trappc1-201ENSMUST00000060956 C1qtnf12Q8R2Z0 308 aa12.01□□□□□ -0.49
Trappc1-201ENSMUST00000060956 Ube2uB1AUC4 352 aa11.9□□□□□ -0.5
Trappc1-201ENSMUST00000060956 G430095P16RikE9Q913 147 aa11.87□□□□□ -0.51
Trappc1-201ENSMUST00000060956 Grwd1Q810D6 446 aaKnown RBP11.86□□□□□ -0.51
Trappc1-201ENSMUST00000060956 NacadQ5SWP3 1504 aa11.86□□□□□ -0.51
Trappc1-201ENSMUST00000060956 Npm2Q80W85 207 aa11.85□□□□□ -0.51
Trappc1-201ENSMUST00000060956 Egfem1Q8C088 590 aa11.85□□□□□ -0.51
Trappc1-201ENSMUST00000060956 AcrbpQ3V140 540 aa11.84□□□□□ -0.51
Trappc1-201ENSMUST00000060956 Kdm5dQ62240 1548 aa11.84□□□□□ -0.51
Trappc1-201ENSMUST00000060956 Znf704Q9ERQ3 566 aa11.83□□□□□ -0.52
Trappc1-201ENSMUST00000060956 Zbtb7aO88939 569 aaKnown RBP11.79□□□□□ -0.52
Trappc1-201ENSMUST00000060956 Riok3Q9DBU3 519 aaKnown RBP11.78□□□□□ -0.52
Trappc1-201ENSMUST00000060956 Slc4a5E9Q3M5 1116 aa11.77□□□□□ -0.53
Trappc1-201ENSMUST00000060956 Trim41Q5NCC3 630 aa11.76□□□□□ -0.53
Trappc1-201ENSMUST00000060956 MyclP10166 368 aa11.73□□□□□ -0.53
Trappc1-201ENSMUST00000060956 Zbtb12Q9Z150 459 aa11.73□□□□□ -0.53
Trappc1-201ENSMUST00000060956 Prm3Q62100 101 aa11.72□□□□□ -0.53
Trappc1-201ENSMUST00000060956 Pde4cQ3UEI1 686 aa11.71□□□□□ -0.53
Trappc1-201ENSMUST00000060956 Sycp2Q9CUU3 1500 aa11.69□□□□□ -0.54
Trappc1-201ENSMUST00000060956 Rnf216P58283 853 aa11.68□□□□□ -0.54
Trappc1-201ENSMUST00000060956 BicraF8VPZ9 1578 aa11.67□□□□□ -0.54
Trappc1-201ENSMUST00000060956 Ms4a5Q810P8 197 aa11.57□□□□□ -0.56
Trappc1-201ENSMUST00000060956 Rtn4Q99P72 1162 aaKnown RBP11.57□□□□□ -0.56
Trappc1-201ENSMUST00000060956 Abcb7Q61102 752 aaKnown RBP11.54□□□□□ -0.56
Trappc1-201ENSMUST00000060956 Gtpbp6Q3U6U5 514 aa11.52□□□□□ -0.57
Trappc1-201ENSMUST00000060956 Styxl1Q9DAR2 321 aa11.46□□□□□ -0.57
Trappc1-201ENSMUST00000060956 Thoc2B1AZI6 1594 aaKnown RBP11.45□□□□□ -0.58
Trappc1-201ENSMUST00000060956 Dnajc5P60904 198 aa11.43□□□□□ -0.58
Trappc1-201ENSMUST00000060956 Nkx1-1G3UXB3 402 aa11.41□□□□□ -0.58
Trappc1-201ENSMUST00000060956 GapdhsQ64467 440 aa11.4□□□□□ -0.58
Trappc1-201ENSMUST00000060956 Tshz2Q68FE9 1030 aa11.35□□□□□ -0.59
Trappc1-201ENSMUST00000060956 Dcaf1Q80TR8 1506 aa11.35□□□□□ -0.59
Trappc1-201ENSMUST00000060956 Pds5bQ4VA53 1446 aaKnown RBP11.32□□□□□ -0.6
Trappc1-201ENSMUST00000060956 Fbln2P37889 1221 aa11.31□□□□□ -0.6
Trappc1-201ENSMUST00000060956 Cc2d2aQ8CFW7 1633 aa11.28□□□□□ -0.6
Trappc1-201ENSMUST00000060956 MpndQ3TV65 487 aa11.2□□□□□ -0.62
Trappc1-201ENSMUST00000060956 Skida1Q80YR3 822 aa11.2□□□□□ -0.62
Trappc1-201ENSMUST00000060956 Npm3Q9CPP0 175 aaKnown RBP11.17□□□□□ -0.62
Trappc1-201ENSMUST00000060956 Atad2bE9Q166 1460 aaKnown RBP11.13□□□□□ -0.63
Trappc1-201ENSMUST00000060956 Kcnn1Q9EQR3 537 aa11.11□□□□□ -0.63
Trappc1-201ENSMUST00000060956 Rb1cc1Q9ESK9 1588 aa11.08□□□□□ -0.64
Trappc1-201ENSMUST00000060956 Fam135aQ6NS59 1506 aa11.05□□□□□ -0.64
Trappc1-201ENSMUST00000060956 Ercc6F8VPZ5 1481 aa11.04□□□□□ -0.64
Trappc1-201ENSMUST00000060956 Prr29B1ARI9 187 aa11.03□□□□□ -0.64
Trappc1-201ENSMUST00000060956 Smarca2Q6DIC0 1577 aa10.99□□□□□ -0.65
Trappc1-201ENSMUST00000060956 Znf703P0CL69 594 aa10.97□□□□□ -0.65
Trappc1-201ENSMUST00000060956 Tcf3P15806 651 aa10.96□□□□□ -0.65
Trappc1-201ENSMUST00000060956 Ehmt2Q9Z148 1263 aaKnown RBP10.95□□□□□ -0.66
Trappc1-201ENSMUST00000060956 Ubl4bQ9CQ84 188 aa10.92□□□□□ -0.66
Trappc1-201ENSMUST00000060956 Frmpd1A2AKB4 1549 aa10.91□□□□□ -0.66
Trappc1-201ENSMUST00000060956 Phldb1Q6PDH0 1371 aaKnown RBP10.9□□□□□ -0.66
Trappc1-201ENSMUST00000060956 Clcn6O35454 870 aa10.89□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Iqgap2Q3UQ44 1575 aa10.89□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Ildr2B5TVM2 661 aa10.88□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Pitpnm1O35954 1243 aa10.88□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Cacnb1Q8R3Z5 597 aa10.88□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Wdr62Q3U3T8 1523 aa10.87□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Baz1aO88379 1555 aa10.86□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Zcchc6Q5BLK4 1491 aaKnown RBP10.86□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Crybg2B7ZCC2 1516 aa10.85□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Smarca4Q3TKT4 1613 aaKnown RBP10.85□□□□□ -0.67
Trappc1-201ENSMUST00000060956 Cecr2E9Q2Z1 1453 aa10.83□□□□□ -0.68
Trappc1-201ENSMUST00000060956 Ppp1r37Q8BKR5 712 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 111.5 ms