RNA–Protein interactions for RNA: ENSMUST00000055671.4

Ifnb1-201, Transcript of Interferon beta, mousemouse

APPRIS P1 BASIC

Gene Ifnb1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1-201ENSMUST00000055671 Mapk8ip2Q9ERE9 830 aa36■■■■□ 3.35
Ifnb1-201ENSMUST00000055671 Chic1Q8CBW7 227 aa34.55■■■■□ 3.12
Ifnb1-201ENSMUST00000055671 Phf23Q8BSN5 401 aa30.89■■■□□ 2.54
Ifnb1-201ENSMUST00000055671 Gab3Q8BSM5 595 aa28.84■■■□□ 2.21
Ifnb1-201ENSMUST00000055671 Plppr3Q7TPB0 716 aa28.01■■■□□ 2.07
Ifnb1-201ENSMUST00000055671 Fam163aQ8CAA5 168 aa27.52■■■□□ 2
Ifnb1-201ENSMUST00000055671 Senp3Q9EP97 568 aaKnown RBP27.47■■□□□ 1.99
Ifnb1-201ENSMUST00000055671 GapdhsQ64467 440 aa25.26■■□□□ 1.63
Ifnb1-201ENSMUST00000055671 Hoxd11P23813 323 aa24.96■■□□□ 1.59
Ifnb1-201ENSMUST00000055671 ArsiQ32KI9 573 aa24.89■■□□□ 1.58
Ifnb1-201ENSMUST00000055671 Znf219Q6IQX8 726 aa24.33■■□□□ 1.49
Ifnb1-201ENSMUST00000055671 Slc34a2Q9DBP0 697 aa24.24■■□□□ 1.47
Ifnb1-201ENSMUST00000055671 Trap1aP19473 224 aa24.13■■□□□ 1.45
Ifnb1-201ENSMUST00000055671 Kcna4Q61423 654 aa24.09■■□□□ 1.45
Ifnb1-201ENSMUST00000055671 Dnajc5bQ9CQ94 199 aa23.41■■□□□ 1.34
Ifnb1-201ENSMUST00000055671 Chrna2Q91X60 512 aa23.16■■□□□ 1.3
Ifnb1-201ENSMUST00000055671 Akt1s1Q9D1F4 257 aa23.15■■□□□ 1.3
Ifnb1-201ENSMUST00000055671 Rsph4aQ8BYM7 716 aa23.13■■□□□ 1.29
Ifnb1-201ENSMUST00000055671 Rimbp2Q80U40 1072 aa22.97■■□□□ 1.27
Ifnb1-201ENSMUST00000055671 Znf704Q9ERQ3 566 aa22.27■■□□□ 1.16
Ifnb1-201ENSMUST00000055671 Slc4a5E9Q3M5 1116 aa22.21■■□□□ 1.15
Ifnb1-201ENSMUST00000055671 Cacnb1Q8R3Z5 597 aa21.62■■□□□ 1.05
Ifnb1-201ENSMUST00000055671 Dmrt2Q8BG36 561 aa21.37■■□□□ 1.01
Ifnb1-201ENSMUST00000055671 Atf5O70191 283 aa21.15■□□□□ 0.98
Ifnb1-201ENSMUST00000055671 Sox12Q04890 314 aa21.06■□□□□ 0.96
Ifnb1-201ENSMUST00000055671 Gm35339A0A140LHH9 1649 aa21.05■□□□□ 0.96
Ifnb1-201ENSMUST00000055671 Znf703P0CL69 594 aa21■□□□□ 0.95
Ifnb1-201ENSMUST00000055671 Ildr2B5TVM2 661 aa20.98■□□□□ 0.95
Ifnb1-201ENSMUST00000055671 Bach1P97302 739 aa20.94■□□□□ 0.94
Ifnb1-201ENSMUST00000055671 Hs6st3Q9QYK4 470 aa20.84■□□□□ 0.93
Ifnb1-201ENSMUST00000055671 NischQ80TM9 1593 aa20.81■□□□□ 0.92
Ifnb1-201ENSMUST00000055671 Ppp4r2Q0VGB7 417 aa20.7■□□□□ 0.9
Ifnb1-201ENSMUST00000055671 Egfem1Q8C088 590 aa20.54■□□□□ 0.88
Ifnb1-201ENSMUST00000055671 Grwd1Q810D6 446 aaKnown RBP20.53■□□□□ 0.88
Ifnb1-201ENSMUST00000055671 Prr29B1ARI9 187 aa20.42■□□□□ 0.86
Ifnb1-201ENSMUST00000055671 Zbtb7aO88939 569 aaKnown RBP20.38■□□□□ 0.85
Ifnb1-201ENSMUST00000055671 Kcnn1Q9EQR3 537 aa20.32■□□□□ 0.84
Ifnb1-201ENSMUST00000055671 Abcc9P70170 1546 aa20.19■□□□□ 0.82
Ifnb1-201ENSMUST00000055671 Abcc8B2RUS7 1588 aa20.13■□□□□ 0.81
Ifnb1-201ENSMUST00000055671 Abcb7Q61102 752 aaKnown RBP20.01■□□□□ 0.79
Ifnb1-201ENSMUST00000055671 WdpcpQ8C456 722 aa19.98■□□□□ 0.79
Ifnb1-201ENSMUST00000055671 Ppargc1bQ8VHJ7 1014 aa19.92■□□□□ 0.78
Ifnb1-201ENSMUST00000055671 Ifnlr1Q8CGK5 535 aa19.82■□□□□ 0.76
Ifnb1-201ENSMUST00000055671 Pip4p2Q9CZX7 257 aa19.72■□□□□ 0.75
Ifnb1-201ENSMUST00000055671 Rnf216P58283 853 aa19.7■□□□□ 0.74
Ifnb1-201ENSMUST00000055671 G430095P16RikE9Q913 147 aa19.65■□□□□ 0.74
Ifnb1-201ENSMUST00000055671 Nkx1-1G3UXB3 402 aa19.51■□□□□ 0.71
Ifnb1-201ENSMUST00000055671 Clcn6O35454 870 aa19.46■□□□□ 0.71
Ifnb1-201ENSMUST00000055671 Kank3Q9Z1P7 791 aa19.41■□□□□ 0.7
Ifnb1-201ENSMUST00000055671 1700123L14RikQ3V2K7 440 aa19.36■□□□□ 0.69
Ifnb1-201ENSMUST00000055671 ScribQ80U72 1612 aa19.35■□□□□ 0.69
Ifnb1-201ENSMUST00000055671 Slc4a1apE9PX68 744 aa19.34■□□□□ 0.69
Ifnb1-201ENSMUST00000055671 Gtpbp6Q3U6U5 514 aa19.27■□□□□ 0.68
Ifnb1-201ENSMUST00000055671 Zbtb12Q9Z150 459 aa19.26■□□□□ 0.67
Ifnb1-201ENSMUST00000055671 Cdca7Q9D0M2 382 aa19.15■□□□□ 0.66
Ifnb1-201ENSMUST00000055671 Pitpnm1O35954 1243 aa19.03■□□□□ 0.64
Ifnb1-201ENSMUST00000055671 Evx2P49749 475 aa19.02■□□□□ 0.64
Ifnb1-201ENSMUST00000055671 Foxp4Q9DBY0 795 aaKnown RBP18.93■□□□□ 0.62
Ifnb1-201ENSMUST00000055671 Trim35Q8C006 501 aa18.9■□□□□ 0.62
Ifnb1-201ENSMUST00000055671 ArntlQ9WTL8 632 aa18.81■□□□□ 0.6
Ifnb1-201ENSMUST00000055671 Kdm5dQ62240 1548 aa18.73■□□□□ 0.59
Ifnb1-201ENSMUST00000055671 NacadQ5SWP3 1504 aa18.72■□□□□ 0.59
Ifnb1-201ENSMUST00000055671 C1qtnf12Q8R2Z0 308 aa18.67■□□□□ 0.58
Ifnb1-201ENSMUST00000055671 Dcaf1Q80TR8 1506 aa18.54■□□□□ 0.56
Ifnb1-201ENSMUST00000055671 Ms4a5Q810P8 197 aa18.49■□□□□ 0.55
Ifnb1-201ENSMUST00000055671 Sycp2Q9CUU3 1500 aa18.37■□□□□ 0.53
Ifnb1-201ENSMUST00000055671 Krtap4-1Q3UUY3 169 aa18.24■□□□□ 0.51
Ifnb1-201ENSMUST00000055671 Rb1cc1Q9ESK9 1588 aa18.14■□□□□ 0.49
Ifnb1-201ENSMUST00000055671 BicraF8VPZ9 1578 aa18.1■□□□□ 0.49
Ifnb1-201ENSMUST00000055671 Fxr2Q9WVR4 673 aaKnown RBP18.08■□□□□ 0.48
Ifnb1-201ENSMUST00000055671 Lhx8O35652 367 aa18.05■□□□□ 0.48
Ifnb1-201ENSMUST00000055671 Rhox8Q6VSS7 320 aa18.01■□□□□ 0.47
Ifnb1-201ENSMUST00000055671 Dok7Q18PE0 504 aa17.94■□□□□ 0.46
Ifnb1-201ENSMUST00000055671 Fbln2P37889 1221 aa17.91■□□□□ 0.46
Ifnb1-201ENSMUST00000055671 Baz1aO88379 1555 aa17.91■□□□□ 0.46
Ifnb1-201ENSMUST00000055671 Ccdc180J3QNE4 1664 aa17.86■□□□□ 0.45
Ifnb1-201ENSMUST00000055671 Trim41Q5NCC3 630 aa17.83■□□□□ 0.44
Ifnb1-201ENSMUST00000055671 Crybg2B7ZCC2 1516 aa17.82■□□□□ 0.44
Ifnb1-201ENSMUST00000055671 Ehmt2Q9Z148 1263 aaKnown RBP17.75■□□□□ 0.43
Ifnb1-201ENSMUST00000055671 Nyap1Q6PFX7 833 aa17.71■□□□□ 0.43
Ifnb1-201ENSMUST00000055671 Cadps2Q8BYR5 1297 aa17.71■□□□□ 0.43
Ifnb1-201ENSMUST00000055671 Kiaa1522A2A7S8 1013 aa17.67■□□□□ 0.42
Ifnb1-201ENSMUST00000055671 Npm3Q9CPP0 175 aaKnown RBP17.63■□□□□ 0.41
Ifnb1-201ENSMUST00000055671 Gjc2Q8BQU6 440 aa17.6■□□□□ 0.41
Ifnb1-201ENSMUST00000055671 Zcchc6Q5BLK4 1491 aaKnown RBP17.6■□□□□ 0.41
Ifnb1-201ENSMUST00000055671 SnphQ80U23 495 aa17.55■□□□□ 0.4
Ifnb1-201ENSMUST00000055671 Riok3Q9DBU3 519 aaKnown RBP17.55■□□□□ 0.4
Ifnb1-201ENSMUST00000055671 Pds5bQ4VA53 1446 aaKnown RBP17.54■□□□□ 0.4
Ifnb1-201ENSMUST00000055671 Map3k10Q66L42 940 aa17.52■□□□□ 0.4
Ifnb1-201ENSMUST00000055671 Smarca2Q6DIC0 1577 aa17.41■□□□□ 0.38
Ifnb1-201ENSMUST00000055671 Rnf225Q9D7D1 332 aa17.41■□□□□ 0.38
Ifnb1-201ENSMUST00000055671 Atad2bE9Q166 1460 aaKnown RBP17.41■□□□□ 0.38
Ifnb1-201ENSMUST00000055671 Skida1Q80YR3 822 aa17.39■□□□□ 0.37
Ifnb1-201ENSMUST00000055671 Thoc2B1AZI6 1594 aaKnown RBP17.38■□□□□ 0.37
Ifnb1-201ENSMUST00000055671 Cecr2E9Q2Z1 1453 aa17.32■□□□□ 0.36
Ifnb1-201ENSMUST00000055671 Smarca4Q3TKT4 1613 aaKnown RBP17.3■□□□□ 0.36
Ifnb1-201ENSMUST00000055671 Zranb1Q7M760 708 aa17.29■□□□□ 0.36
Ifnb1-201ENSMUST00000055671 Dcbld2Q91ZV3 769 aa17.27■□□□□ 0.36
Ifnb1-201ENSMUST00000055671 MpndQ3TV65 487 aa17.21■□□□□ 0.35
Ifnb1-201ENSMUST00000055671 Iqgap2Q3UQ44 1575 aa17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms