RNA–Protein interactions for RNA: ENSMUST00000051754.1

Pcdhb3-201, Transcript of Protocadherin beta 3, mousemouse

APPRIS P1 BASIC

Gene Pcdhb3, Length 3,787 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3-201ENSMUST00000051754 Rhox8Q6VSS7 320 aa14.67□□□□□ -0.06
Pcdhb3-201ENSMUST00000051754 NischQ80TM9 1593 aa14.53□□□□□ -0.08
Pcdhb3-201ENSMUST00000051754 Ehmt2Q9Z148 1263 aaKnown RBP14.42□□□□□ -0.1
Pcdhb3-201ENSMUST00000051754 Rpgrip1Q9EPQ2 1331 aa14.22□□□□□ -0.13
Pcdhb3-201ENSMUST00000051754 Acin1Q9JIX8 1338 aaKnown RBP14.09□□□□□ -0.15
Pcdhb3-201ENSMUST00000051754 Pcgf6Q99NA9 353 aa14.08□□□□□ -0.16
Pcdhb3-201ENSMUST00000051754 Rtl1Q7M732 1744 aa14.03□□□□□ -0.16
Pcdhb3-201ENSMUST00000051754 Abcc9P70170 1546 aa14□□□□□ -0.17
Pcdhb3-201ENSMUST00000051754 Ccdc180J3QNE4 1664 aa13.93□□□□□ -0.18
Pcdhb3-201ENSMUST00000051754 Gm35339A0A140LHH9 1649 aa13.81□□□□□ -0.2
Pcdhb3-201ENSMUST00000051754 Supt5hO55201 1082 aaKnown RBP13.78□□□□□ -0.2
Pcdhb3-201ENSMUST00000051754 Neurod1Q60867 357 aa13.68□□□□□ -0.22
Pcdhb3-201ENSMUST00000051754 Abcc8B2RUS7 1588 aa13.6□□□□□ -0.23
Pcdhb3-201ENSMUST00000051754 Zcchc6Q5BLK4 1491 aaKnown RBP13.52□□□□□ -0.25
Pcdhb3-201ENSMUST00000051754 Trim41Q5NCC3 630 aa13.48□□□□□ -0.25
Pcdhb3-201ENSMUST00000051754 Ccdc136Q3TVA9 1136 aa13.47□□□□□ -0.25
Pcdhb3-201ENSMUST00000051754 Zeb1Q64318 1117 aa13.42□□□□□ -0.26
Pcdhb3-201ENSMUST00000051754 Dcaf1Q80TR8 1506 aa13.38□□□□□ -0.27
Pcdhb3-201ENSMUST00000051754 1700123L14RikQ3V2K7 440 aa13.32□□□□□ -0.28
Pcdhb3-201ENSMUST00000051754 HrcG5E8J6 738 aa13.29□□□□□ -0.28
Pcdhb3-201ENSMUST00000051754 Csrnp3P59055 597 aa13.29□□□□□ -0.28
Pcdhb3-201ENSMUST00000051754 Cngb1E1AZ71 1325 aa13.22□□□□□ -0.29
Pcdhb3-201ENSMUST00000051754 Gm38655A0A286YDK6 273 aa13.21□□□□□ -0.3
Pcdhb3-201ENSMUST00000051754 Sall2Q9QX96 1004 aa13.21□□□□□ -0.3
Pcdhb3-201ENSMUST00000051754 Ppargc1bQ8VHJ7 1014 aa13.15□□□□□ -0.31
Pcdhb3-201ENSMUST00000051754 Las1lA2BE28 776 aaKnown RBP13.08□□□□□ -0.32
Pcdhb3-201ENSMUST00000051754 Gab3Q8BSM5 595 aa12.99□□□□□ -0.33
Pcdhb3-201ENSMUST00000051754 Mier1Q5UAK0 511 aa12.98□□□□□ -0.33
Pcdhb3-201ENSMUST00000051754 Anks4bQ8K3X6 423 aa12.97□□□□□ -0.33
Pcdhb3-201ENSMUST00000051754 Aebp2Q9Z248 504 aaKnown RBP12.93□□□□□ -0.34
Pcdhb3-201ENSMUST00000051754 Wdr66E9Q743 1299 aa12.9□□□□□ -0.34
Pcdhb3-201ENSMUST00000051754 CenpbP27790 599 aa12.88□□□□□ -0.35
Pcdhb3-201ENSMUST00000051754 Chic1Q8CBW7 227 aa12.79□□□□□ -0.36
Pcdhb3-201ENSMUST00000051754 Esf1Q3V1V3 845 aaKnown RBP12.78□□□□□ -0.36
Pcdhb3-201ENSMUST00000051754 NefmP08553 848 aa12.77□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 Nop58Q6DFW4 536 aaKnown RBP12.75□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 Cdk11bP24788 784 aaKnown RBP12.74□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 Mapk8ip2Q9ERE9 830 aa12.73□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 Rb1cc1Q9ESK9 1588 aa12.73□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 Aplp2Q06335 707 aa12.73□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 DiexfQ8BTT6 772 aaKnown RBP12.72□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 Cep164Q5DU05 1446 aa12.71□□□□□ -0.37
Pcdhb3-201ENSMUST00000051754 SafbD3YXK2 937 aaKnown RBP12.69□□□□□ -0.38
Pcdhb3-201ENSMUST00000051754 UbtfP25976 765 aaKnown RBP12.67□□□□□ -0.38
Pcdhb3-201ENSMUST00000051754 Bcl11aQ9QYE3 773 aa12.67□□□□□ -0.38
Pcdhb3-201ENSMUST00000051754 Ifnlr1Q8CGK5 535 aa12.65□□□□□ -0.39
Pcdhb3-201ENSMUST00000051754 Fam71e1A1L3C1 212 aa12.64□□□□□ -0.39
Pcdhb3-201ENSMUST00000051754 Rsf1E9PWW9 1441 aaKnown RBP12.59□□□□□ -0.39
Pcdhb3-201ENSMUST00000051754 PrkcshO08795 521 aa12.55□□□□□ -0.4
Pcdhb3-201ENSMUST00000051754 Hnrnpul2Q00PI9 745 aaKnown RBP12.55□□□□□ -0.4
Pcdhb3-201ENSMUST00000051754 Baz1aO88379 1555 aa12.54□□□□□ -0.4
Pcdhb3-201ENSMUST00000051754 Myt1Q8CFC2 1127 aa12.54□□□□□ -0.4
Pcdhb3-201ENSMUST00000051754 Ap3b1Q9Z1T1 1105 aa12.54□□□□□ -0.4
Pcdhb3-201ENSMUST00000051754 ClspnQ80YR7 1315 aa12.53□□□□□ -0.4
Pcdhb3-201ENSMUST00000051754 Kdm5dQ62240 1548 aa12.48□□□□□ -0.41
Pcdhb3-201ENSMUST00000051754 Myt1lP97500 1187 aa12.47□□□□□ -0.41
Pcdhb3-201ENSMUST00000051754 Ccdc88bQ4QRL3 1481 aa12.45□□□□□ -0.42
Pcdhb3-201ENSMUST00000051754 NacadQ5SWP3 1504 aa12.45□□□□□ -0.42
Pcdhb3-201ENSMUST00000051754 ScribQ80U72 1612 aa12.44□□□□□ -0.42
Pcdhb3-201ENSMUST00000051754 Npm2Q80W85 207 aa12.4□□□□□ -0.43
Pcdhb3-201ENSMUST00000051754 Amer1Q7TS75 1132 aa12.36□□□□□ -0.43
Pcdhb3-201ENSMUST00000051754 TonslQ6NZL6 1363 aa12.35□□□□□ -0.43
Pcdhb3-201ENSMUST00000051754 Eid3Q3V124 375 aa12.31□□□□□ -0.44
Pcdhb3-201ENSMUST00000051754 Brd4Q9ESU6 1400 aaKnown RBP12.3□□□□□ -0.44
Pcdhb3-201ENSMUST00000051754 Smarca2Q6DIC0 1577 aa12.27□□□□□ -0.44
Pcdhb3-201ENSMUST00000051754 Ttbk1Q6PCN3 1308 aa12.24□□□□□ -0.45
Pcdhb3-201ENSMUST00000051754 Plekhg3Q4VAC9 1341 aa12.24□□□□□ -0.45
Pcdhb3-201ENSMUST00000051754 Nolc1E9Q5C9 702 aaKnown RBP12.22□□□□□ -0.45
Pcdhb3-201ENSMUST00000051754 Ube2uB1AUC4 352 aa12.21□□□□□ -0.46
Pcdhb3-201ENSMUST00000051754 Il27Q8K3I6 234 aa12.16□□□□□ -0.46
Pcdhb3-201ENSMUST00000051754 Crybg2B7ZCC2 1516 aa12.15□□□□□ -0.46
Pcdhb3-201ENSMUST00000051754 Golga3P55937 1487 aa12.12□□□□□ -0.47
Pcdhb3-201ENSMUST00000051754 Slc24a1Q91WD8 1130 aa12.1□□□□□ -0.47
Pcdhb3-201ENSMUST00000051754 Znf710Q3U288 666 aa12.09□□□□□ -0.47
Pcdhb3-201ENSMUST00000051754 Sycp2Q9CUU3 1500 aa12.09□□□□□ -0.47
Pcdhb3-201ENSMUST00000051754 Anp32aO35381 247 aa12.07□□□□□ -0.48
Pcdhb3-201ENSMUST00000051754 Cecr2E9Q2Z1 1453 aa12.07□□□□□ -0.48
Pcdhb3-201ENSMUST00000051754 Tnnt3Q9QZ47 272 aa12.05□□□□□ -0.48
Pcdhb3-201ENSMUST00000051754 Supt16hQ920B9 1047 aa12□□□□□ -0.49
Pcdhb3-201ENSMUST00000051754 Calr4Q3TQS0 420 aa12□□□□□ -0.49
Pcdhb3-201ENSMUST00000051754 Rpap1Q80TE0 1409 aa11.99□□□□□ -0.49
Pcdhb3-201ENSMUST00000051754 Hdac5Q9Z2V6 1113 aa11.98□□□□□ -0.49
Pcdhb3-201ENSMUST00000051754 Pak3Q61036 559 aa11.97□□□□□ -0.49
Pcdhb3-201ENSMUST00000051754 Eif5bQ05D44 1216 aaKnown RBP11.95□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 Ppp4r2Q0VGB7 417 aa11.95□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 Synj1Q8CHC4 1574 aa11.93□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 P3h3Q8CG70 732 aa11.93□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 Clip1Q922J3 1391 aa11.92□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 Ncapd3Q6ZQK0 1506 aa11.92□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 Rapgef2Q8CHG7 1496 aa11.91□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 NclP09405 707 aaKnown RBP11.9□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 CftrP26361 1476 aa11.9□□□□□ -0.5
Pcdhb3-201ENSMUST00000051754 Slc4a3P16283 1227 aa11.89□□□□□ -0.51
Pcdhb3-201ENSMUST00000051754 Cep162Q6ZQ06 1403 aa11.89□□□□□ -0.51
Pcdhb3-201ENSMUST00000051754 Sin3aQ60520 1274 aaKnown RBP11.87□□□□□ -0.51
Pcdhb3-201ENSMUST00000051754 Fam50aQ9WV03 339 aaKnown RBP11.87□□□□□ -0.51
Pcdhb3-201ENSMUST00000051754 Cc2d2aQ8CFW7 1633 aa11.83□□□□□ -0.52
Pcdhb3-201ENSMUST00000051754 Plppr3Q7TPB0 716 aa11.82□□□□□ -0.52
Pcdhb3-201ENSMUST00000051754 Top2bQ64511 1612 aa11.82□□□□□ -0.52
Pcdhb3-201ENSMUST00000051754 Plcd4Q8K3R3 807 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms