RNA–Protein interactions for RNA: ENSMUST00000048459.7

5530400C23Rik-201, Transcript of RIKEN cDNA 5530400C23 gene, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene 5530400C23Rik, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23Rik-201ENSMUST00000048459 Chic1Q8CBW7 227 aa21.66■■□□□ 1.06
5530400C23Rik-201ENSMUST00000048459 Mapk8ip2Q9ERE9 830 aa21.03■□□□□ 0.96
5530400C23Rik-201ENSMUST00000048459 Phf23Q8BSN5 401 aa19.62■□□□□ 0.73
5530400C23Rik-201ENSMUST00000048459 Plppr3Q7TPB0 716 aa18.88■□□□□ 0.61
5530400C23Rik-201ENSMUST00000048459 Gab3Q8BSM5 595 aa18.69■□□□□ 0.58
5530400C23Rik-201ENSMUST00000048459 Senp3Q9EP97 568 aaKnown RBP18■□□□□ 0.47
5530400C23Rik-201ENSMUST00000048459 Kcna4Q61423 654 aa17.4■□□□□ 0.38
5530400C23Rik-201ENSMUST00000048459 Hoxd11P23813 323 aa15.82■□□□□ 0.12
5530400C23Rik-201ENSMUST00000048459 Trap1aP19473 224 aa15.71■□□□□ 0.11
5530400C23Rik-201ENSMUST00000048459 Dmrt2Q8BG36 561 aa15.57■□□□□ 0.08
5530400C23Rik-201ENSMUST00000048459 Fam163aQ8CAA5 168 aa15.46■□□□□ 0.07
5530400C23Rik-201ENSMUST00000048459 NischQ80TM9 1593 aa15.36■□□□□ 0.05
5530400C23Rik-201ENSMUST00000048459 Ppargc1bQ8VHJ7 1014 aa15.36■□□□□ 0.05
5530400C23Rik-201ENSMUST00000048459 Gm35339A0A140LHH9 1649 aa15.34■□□□□ 0.05
5530400C23Rik-201ENSMUST00000048459 Znf219Q6IQX8 726 aa15.08■□□□□ 0
5530400C23Rik-201ENSMUST00000048459 Abcc9P70170 1546 aa14.95□□□□□ -0.02
5530400C23Rik-201ENSMUST00000048459 Chrna2Q91X60 512 aa14.88□□□□□ -0.03
5530400C23Rik-201ENSMUST00000048459 Slc4a1apE9PX68 744 aa14.86□□□□□ -0.03
5530400C23Rik-201ENSMUST00000048459 Atf5O70191 283 aa14.8□□□□□ -0.04
5530400C23Rik-201ENSMUST00000048459 Dnajc5bQ9CQ94 199 aa14.77□□□□□ -0.05
5530400C23Rik-201ENSMUST00000048459 Rsph4aQ8BYM7 716 aa14.75□□□□□ -0.05
5530400C23Rik-201ENSMUST00000048459 Abcc8B2RUS7 1588 aa14.74□□□□□ -0.05
5530400C23Rik-201ENSMUST00000048459 Rimbp2Q80U40 1072 aa14.64□□□□□ -0.07
5530400C23Rik-201ENSMUST00000048459 Hs6st3Q9QYK4 470 aa14.5□□□□□ -0.09
5530400C23Rik-201ENSMUST00000048459 Ppp4r2Q0VGB7 417 aa14.49□□□□□ -0.09
5530400C23Rik-201ENSMUST00000048459 Akt1s1Q9D1F4 257 aa14.28□□□□□ -0.12
5530400C23Rik-201ENSMUST00000048459 ArsiQ32KI9 573 aa14.22□□□□□ -0.13
5530400C23Rik-201ENSMUST00000048459 1700123L14RikQ3V2K7 440 aa14.17□□□□□ -0.14
5530400C23Rik-201ENSMUST00000048459 Slc34a2Q9DBP0 697 aa14.11□□□□□ -0.15
5530400C23Rik-201ENSMUST00000048459 Bach1P97302 739 aa13.98□□□□□ -0.17
5530400C23Rik-201ENSMUST00000048459 ScribQ80U72 1612 aa13.88□□□□□ -0.19
5530400C23Rik-201ENSMUST00000048459 Fam71e1A1L3C1 212 aa13.83□□□□□ -0.2
5530400C23Rik-201ENSMUST00000048459 Sox12Q04890 314 aa13.77□□□□□ -0.21
5530400C23Rik-201ENSMUST00000048459 Dcaf1Q80TR8 1506 aa13.77□□□□□ -0.21
5530400C23Rik-201ENSMUST00000048459 Rhox8Q6VSS7 320 aa13.75□□□□□ -0.21
5530400C23Rik-201ENSMUST00000048459 Ube2uB1AUC4 352 aa13.7□□□□□ -0.22
5530400C23Rik-201ENSMUST00000048459 Cdca7Q9D0M2 382 aa13.65□□□□□ -0.22
5530400C23Rik-201ENSMUST00000048459 Nlrp6Q91WS2 869 aa13.62□□□□□ -0.23
5530400C23Rik-201ENSMUST00000048459 WdpcpQ8C456 722 aa13.59□□□□□ -0.23
5530400C23Rik-201ENSMUST00000048459 C1qtnf12Q8R2Z0 308 aa13.57□□□□□ -0.24
5530400C23Rik-201ENSMUST00000048459 Kdm5dQ62240 1548 aa13.57□□□□□ -0.24
5530400C23Rik-201ENSMUST00000048459 NacadQ5SWP3 1504 aa13.56□□□□□ -0.24
5530400C23Rik-201ENSMUST00000048459 Pde4cQ3UEI1 686 aa13.43□□□□□ -0.26
5530400C23Rik-201ENSMUST00000048459 Rb1cc1Q9ESK9 1588 aa13.42□□□□□ -0.26
5530400C23Rik-201ENSMUST00000048459 AcrbpQ3V140 540 aa13.33□□□□□ -0.28
5530400C23Rik-201ENSMUST00000048459 Ccdc180J3QNE4 1664 aa13.32□□□□□ -0.28
5530400C23Rik-201ENSMUST00000048459 Baz1aO88379 1555 aa13.3□□□□□ -0.28
5530400C23Rik-201ENSMUST00000048459 Sycp2Q9CUU3 1500 aa13.28□□□□□ -0.28
5530400C23Rik-201ENSMUST00000048459 Rtl1Q7M732 1744 aa13.27□□□□□ -0.28
5530400C23Rik-201ENSMUST00000048459 Riok3Q9DBU3 519 aaKnown RBP13.23□□□□□ -0.29
5530400C23Rik-201ENSMUST00000048459 Crybg2B7ZCC2 1516 aa13.22□□□□□ -0.29
5530400C23Rik-201ENSMUST00000048459 Ms4a5Q810P8 197 aa13.18□□□□□ -0.3
5530400C23Rik-201ENSMUST00000048459 Npm2Q80W85 207 aa13.11□□□□□ -0.31
5530400C23Rik-201ENSMUST00000048459 G430095P16RikE9Q913 147 aa13.07□□□□□ -0.32
5530400C23Rik-201ENSMUST00000048459 MyclP10166 368 aa13.06□□□□□ -0.32
5530400C23Rik-201ENSMUST00000048459 Zbtb7aO88939 569 aaKnown RBP13.05□□□□□ -0.32
5530400C23Rik-201ENSMUST00000048459 Egfem1Q8C088 590 aa13.02□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Prm3Q62100 101 aa13.01□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Zcchc6Q5BLK4 1491 aaKnown RBP13□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Rtn4Q99P72 1162 aaKnown RBP13□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Trim41Q5NCC3 630 aa12.99□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Tshz2Q68FE9 1030 aa12.99□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Ifnlr1Q8CGK5 535 aa12.97□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 BicraF8VPZ9 1578 aa12.97□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Smarca2Q6DIC0 1577 aa12.96□□□□□ -0.33
5530400C23Rik-201ENSMUST00000048459 Styxl1Q9DAR2 321 aa12.89□□□□□ -0.35
5530400C23Rik-201ENSMUST00000048459 Grwd1Q810D6 446 aaKnown RBP12.87□□□□□ -0.35
5530400C23Rik-201ENSMUST00000048459 Znf704Q9ERQ3 566 aa12.85□□□□□ -0.35
5530400C23Rik-201ENSMUST00000048459 Slc4a5E9Q3M5 1116 aa12.8□□□□□ -0.36
5530400C23Rik-201ENSMUST00000048459 Zbtb12Q9Z150 459 aa12.78□□□□□ -0.36
5530400C23Rik-201ENSMUST00000048459 Ccdc136Q3TVA9 1136 aa12.76□□□□□ -0.37
5530400C23Rik-201ENSMUST00000048459 Abcb7Q61102 752 aaKnown RBP12.75□□□□□ -0.37
5530400C23Rik-201ENSMUST00000048459 Rnf216P58283 853 aa12.73□□□□□ -0.37
5530400C23Rik-201ENSMUST00000048459 Gtpbp6Q3U6U5 514 aa12.73□□□□□ -0.37
5530400C23Rik-201ENSMUST00000048459 Cecr2E9Q2Z1 1453 aa12.71□□□□□ -0.38
5530400C23Rik-201ENSMUST00000048459 Brd4Q9ESU6 1400 aaKnown RBP12.64□□□□□ -0.39
5530400C23Rik-201ENSMUST00000048459 Smarca4Q3TKT4 1613 aaKnown RBP12.59□□□□□ -0.39
5530400C23Rik-201ENSMUST00000048459 Ehmt2Q9Z148 1263 aaKnown RBP12.57□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 Pds5bQ4VA53 1446 aaKnown RBP12.56□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 Fbln2P37889 1221 aa12.56□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 Nkx1-1G3UXB3 402 aa12.55□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 Atad2bE9Q166 1460 aaKnown RBP12.54□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 CftrP26361 1476 aa12.53□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 Npm3Q9CPP0 175 aaKnown RBP12.53□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 Synj1Q8CHC4 1574 aa12.52□□□□□ -0.4
5530400C23Rik-201ENSMUST00000048459 Cttnbp2B9EJA2 1648 aa12.47□□□□□ -0.41
5530400C23Rik-201ENSMUST00000048459 HrcG5E8J6 738 aa12.46□□□□□ -0.41
5530400C23Rik-201ENSMUST00000048459 MpndQ3TV65 487 aa12.46□□□□□ -0.41
5530400C23Rik-201ENSMUST00000048459 Iqgap2Q3UQ44 1575 aa12.44□□□□□ -0.42
5530400C23Rik-201ENSMUST00000048459 Tcf3P15806 651 aa12.38□□□□□ -0.43
5530400C23Rik-201ENSMUST00000048459 Golga3P55937 1487 aa12.38□□□□□ -0.43
5530400C23Rik-201ENSMUST00000048459 Ppp1r37Q8BKR5 712 aa12.34□□□□□ -0.43
5530400C23Rik-201ENSMUST00000048459 Ecm2Q5FW85 670 aa12.33□□□□□ -0.44
5530400C23Rik-201ENSMUST00000048459 Esf1Q3V1V3 845 aaKnown RBP12.31□□□□□ -0.44
5530400C23Rik-201ENSMUST00000048459 Ercc6F8VPZ5 1481 aa12.29□□□□□ -0.44
5530400C23Rik-201ENSMUST00000048459 Wdr62Q3U3T8 1523 aa12.28□□□□□ -0.44
5530400C23Rik-201ENSMUST00000048459 Cngb1E1AZ71 1325 aa12.27□□□□□ -0.45
5530400C23Rik-201ENSMUST00000048459 Frmpd1A2AKB4 1549 aa12.27□□□□□ -0.45
5530400C23Rik-201ENSMUST00000048459 Top2bQ64511 1612 aa12.26□□□□□ -0.45
5530400C23Rik-201ENSMUST00000048459 Thoc2B1AZI6 1594 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms