RNA–Protein interactions for RNA: ENSMUST00000044234.13

Tgfbr1-202, Transcript of TGF-beta receptor type-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tgfbr1, Length 2,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1-202ENSMUST00000044234 NischQ80TM9 1593 aa23.47■■□□□ 1.35
Tgfbr1-202ENSMUST00000044234 Gm35339A0A140LHH9 1649 aa23.4■■□□□ 1.34
Tgfbr1-202ENSMUST00000044234 Abcc9P70170 1546 aa22.8■■□□□ 1.24
Tgfbr1-202ENSMUST00000044234 Abcc8B2RUS7 1588 aa22.42■■□□□ 1.18
Tgfbr1-202ENSMUST00000044234 Rhox8Q6VSS7 320 aa21.95■■□□□ 1.1
Tgfbr1-202ENSMUST00000044234 Rtl1Q7M732 1744 aa21.23■□□□□ 0.99
Tgfbr1-202ENSMUST00000044234 ScribQ80U72 1612 aa21.12■□□□□ 0.97
Tgfbr1-202ENSMUST00000044234 Ccdc180J3QNE4 1664 aa20.95■□□□□ 0.94
Tgfbr1-202ENSMUST00000044234 Dcaf1Q80TR8 1506 aa20.88■□□□□ 0.93
Tgfbr1-202ENSMUST00000044234 Zcchc6Q5BLK4 1491 aaKnown RBP20.73■□□□□ 0.91
Tgfbr1-202ENSMUST00000044234 Kdm5dQ62240 1548 aa20.62■□□□□ 0.89
Tgfbr1-202ENSMUST00000044234 Rb1cc1Q9ESK9 1588 aa20.56■□□□□ 0.88
Tgfbr1-202ENSMUST00000044234 NacadQ5SWP3 1504 aa20.52■□□□□ 0.88
Tgfbr1-202ENSMUST00000044234 Ccdc136Q3TVA9 1136 aa20.41■□□□□ 0.86
Tgfbr1-202ENSMUST00000044234 Baz1aO88379 1555 aa20.3■□□□□ 0.84
Tgfbr1-202ENSMUST00000044234 Sycp2Q9CUU3 1500 aa20.09■□□□□ 0.81
Tgfbr1-202ENSMUST00000044234 HrcG5E8J6 738 aa20.07■□□□□ 0.8
Tgfbr1-202ENSMUST00000044234 Crybg2B7ZCC2 1516 aa20.04■□□□□ 0.8
Tgfbr1-202ENSMUST00000044234 Ehmt2Q9Z148 1263 aaKnown RBP19.95■□□□□ 0.78
Tgfbr1-202ENSMUST00000044234 Trim41Q5NCC3 630 aa19.85■□□□□ 0.77
Tgfbr1-202ENSMUST00000044234 Smarca2Q6DIC0 1577 aa19.83■□□□□ 0.77
Tgfbr1-202ENSMUST00000044234 Rpgrip1Q9EPQ2 1331 aa19.75■□□□□ 0.75
Tgfbr1-202ENSMUST00000044234 Acin1Q9JIX8 1338 aaKnown RBP19.69■□□□□ 0.74
Tgfbr1-202ENSMUST00000044234 BicraF8VPZ9 1578 aa19.69■□□□□ 0.74
Tgfbr1-202ENSMUST00000044234 Cecr2E9Q2Z1 1453 aa19.51■□□□□ 0.71
Tgfbr1-202ENSMUST00000044234 Cep164Q5DU05 1446 aa19.48■□□□□ 0.71
Tgfbr1-202ENSMUST00000044234 Cngb1E1AZ71 1325 aa19.47■□□□□ 0.71
Tgfbr1-202ENSMUST00000044234 Chic1Q8CBW7 227 aa19.43■□□□□ 0.7
Tgfbr1-202ENSMUST00000044234 Rsf1E9PWW9 1441 aaKnown RBP19.36■□□□□ 0.69
Tgfbr1-202ENSMUST00000044234 Brd4Q9ESU6 1400 aaKnown RBP19.36■□□□□ 0.69
Tgfbr1-202ENSMUST00000044234 Gab3Q8BSM5 595 aa19.31■□□□□ 0.68
Tgfbr1-202ENSMUST00000044234 Synj1Q8CHC4 1574 aa19.28■□□□□ 0.68
Tgfbr1-202ENSMUST00000044234 Ccdc88bQ4QRL3 1481 aa19.25■□□□□ 0.67
Tgfbr1-202ENSMUST00000044234 Golga3P55937 1487 aa19.21■□□□□ 0.67
Tgfbr1-202ENSMUST00000044234 Smarca4Q3TKT4 1613 aaKnown RBP19.15■□□□□ 0.66
Tgfbr1-202ENSMUST00000044234 Esf1Q3V1V3 845 aaKnown RBP19.14■□□□□ 0.65
Tgfbr1-202ENSMUST00000044234 CftrP26361 1476 aa19.13■□□□□ 0.65
Tgfbr1-202ENSMUST00000044234 Cttnbp2B9EJA2 1648 aa19.07■□□□□ 0.64
Tgfbr1-202ENSMUST00000044234 Top2bQ64511 1612 aa18.94■□□□□ 0.62
Tgfbr1-202ENSMUST00000044234 Pcgf6Q99NA9 353 aa18.94■□□□□ 0.62
Tgfbr1-202ENSMUST00000044234 Iqgap2Q3UQ44 1575 aa18.92■□□□□ 0.62
Tgfbr1-202ENSMUST00000044234 Atad2bE9Q166 1460 aaKnown RBP18.9■□□□□ 0.62
Tgfbr1-202ENSMUST00000044234 Pds5bQ4VA53 1446 aaKnown RBP18.89■□□□□ 0.61
Tgfbr1-202ENSMUST00000044234 Cc2d2aQ8CFW7 1633 aa18.84■□□□□ 0.61
Tgfbr1-202ENSMUST00000044234 Mier1Q5UAK0 511 aa18.74■□□□□ 0.59
Tgfbr1-202ENSMUST00000044234 Supt5hO55201 1082 aaKnown RBP18.73■□□□□ 0.59
Tgfbr1-202ENSMUST00000044234 Fmn1Q05860 1466 aa18.65■□□□□ 0.58
Tgfbr1-202ENSMUST00000044234 Rapgef2Q8CHG7 1496 aa18.64■□□□□ 0.57
Tgfbr1-202ENSMUST00000044234 Wdr62Q3U3T8 1523 aa18.6■□□□□ 0.57
Tgfbr1-202ENSMUST00000044234 Top2aQ01320 1528 aaKnown RBP18.6■□□□□ 0.57
Tgfbr1-202ENSMUST00000044234 Zeb1Q64318 1117 aa18.59■□□□□ 0.57
Tgfbr1-202ENSMUST00000044234 Myt1lP97500 1187 aa18.58■□□□□ 0.57
Tgfbr1-202ENSMUST00000044234 Frmpd1A2AKB4 1549 aa18.58■□□□□ 0.56
Tgfbr1-202ENSMUST00000044234 UbtfP25976 765 aaKnown RBP18.55■□□□□ 0.56
Tgfbr1-202ENSMUST00000044234 Ercc6F8VPZ5 1481 aa18.54■□□□□ 0.56
Tgfbr1-202ENSMUST00000044234 Cep162Q6ZQ06 1403 aa18.52■□□□□ 0.56
Tgfbr1-202ENSMUST00000044234 NefmP08553 848 aa18.5■□□□□ 0.55
Tgfbr1-202ENSMUST00000044234 Unc13aQ4KUS2 1712 aa18.47■□□□□ 0.55
Tgfbr1-202ENSMUST00000044234 Npm2Q80W85 207 aa18.47■□□□□ 0.55
Tgfbr1-202ENSMUST00000044234 Thoc2B1AZI6 1594 aaKnown RBP18.43■□□□□ 0.54
Tgfbr1-202ENSMUST00000044234 TnnQ80Z71 1560 aa18.41■□□□□ 0.54
Tgfbr1-202ENSMUST00000044234 Lamc3Q9R0B6 1581 aa18.33■□□□□ 0.53
Tgfbr1-202ENSMUST00000044234 Il27Q8K3I6 234 aa18.3■□□□□ 0.52
Tgfbr1-202ENSMUST00000044234 Plekhg3Q4VAC9 1341 aa18.29■□□□□ 0.52
Tgfbr1-202ENSMUST00000044234 Sall2Q9QX96 1004 aa18.29■□□□□ 0.52
Tgfbr1-202ENSMUST00000044234 Eif4g1Q6NZJ6 1600 aaKnown RBP18.28■□□□□ 0.52
Tgfbr1-202ENSMUST00000044234 Clip1Q922J3 1391 aa18.27■□□□□ 0.52
Tgfbr1-202ENSMUST00000044234 PtprkP35822 1457 aa18.27■□□□□ 0.52
Tgfbr1-202ENSMUST00000044234 Phldb1Q6PDH0 1371 aaKnown RBP18.23■□□□□ 0.51
Tgfbr1-202ENSMUST00000044234 Arhgap35Q91YM2 1499 aa18.21■□□□□ 0.5
Tgfbr1-202ENSMUST00000044234 Kif15Q6P9L6 1387 aa18.2■□□□□ 0.5
Tgfbr1-202ENSMUST00000044234 Fam135aQ6NS59 1506 aa18.18■□□□□ 0.5
Tgfbr1-202ENSMUST00000044234 Neurod1Q60867 357 aa18.16■□□□□ 0.5
Tgfbr1-202ENSMUST00000044234 Aebp2Q9Z248 504 aaKnown RBP18.15■□□□□ 0.5
Tgfbr1-202ENSMUST00000044234 Ap3b1Q9Z1T1 1105 aa18.14■□□□□ 0.49
Tgfbr1-202ENSMUST00000044234 NrkQ9R0G8 1455 aa18.12■□□□□ 0.49
Tgfbr1-202ENSMUST00000044234 Camsap1A2AHC3 1581 aa18.12■□□□□ 0.49
Tgfbr1-202ENSMUST00000044234 Wdr66E9Q743 1299 aa18.07■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Arap1Q4LDD4 1452 aa18.06■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Las1lA2BE28 776 aaKnown RBP18.06■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Ppargc1bQ8VHJ7 1014 aa18.05■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Ubl4bQ9CQ84 188 aa18.04■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Shroom4Q1W617 1475 aa18.04■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Ncapd3Q6ZQK0 1506 aa18.03■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Ccdc18Q640L5 1455 aa18.03■□□□□ 0.48
Tgfbr1-202ENSMUST00000044234 Eea1Q8BL66 1411 aa18.01■□□□□ 0.47
Tgfbr1-202ENSMUST00000044234 Setd5Q5XJV7 1441 aa17.99■□□□□ 0.47
Tgfbr1-202ENSMUST00000044234 Cux2P70298 1426 aa17.99■□□□□ 0.47
Tgfbr1-202ENSMUST00000044234 Grin2bQ01097 1482 aa17.96■□□□□ 0.47
Tgfbr1-202ENSMUST00000044234 TonslQ6NZL6 1363 aa17.95■□□□□ 0.46
Tgfbr1-202ENSMUST00000044234 Arhgef5E9Q7D5 1581 aa17.93■□□□□ 0.46
Tgfbr1-202ENSMUST00000044234 Map3k1P53349 1493 aa17.9■□□□□ 0.46
Tgfbr1-202ENSMUST00000044234 Baz1bQ9Z277 1479 aa17.9■□□□□ 0.46
Tgfbr1-202ENSMUST00000044234 Mroh2bQ7M6Y6 1581 aa17.89■□□□□ 0.45
Tgfbr1-202ENSMUST00000044234 AqrQ8CFQ3 1481 aaKnown RBP17.86■□□□□ 0.45
Tgfbr1-202ENSMUST00000044234 ClspnQ80YR7 1315 aa17.86■□□□□ 0.45
Tgfbr1-202ENSMUST00000044234 Eid3Q3V124 375 aa17.85■□□□□ 0.45
Tgfbr1-202ENSMUST00000044234 Npm1Q61937 292 aaKnown RBP17.85■□□□□ 0.45
Tgfbr1-202ENSMUST00000044234 Dnajc5bQ9CQ94 199 aa17.81■□□□□ 0.44
Tgfbr1-202ENSMUST00000044234 Ankrd26Q811D2 1581 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms