RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 NischQ80TM9 1593 aa33.39■■■□□ 2.94
Sec61a1-201ENSMUST00000032168 Gm35339A0A140LHH9 1649 aa32.73■■■□□ 2.83
Sec61a1-201ENSMUST00000032168 Abcc9P70170 1546 aa32.34■■■□□ 2.77
Sec61a1-201ENSMUST00000032168 Abcc8B2RUS7 1588 aa31.74■■■□□ 2.67
Sec61a1-201ENSMUST00000032168 Rhox8Q6VSS7 320 aa30.99■■■□□ 2.55
Sec61a1-201ENSMUST00000032168 Rtl1Q7M732 1744 aa29.79■■■□□ 2.36
Sec61a1-201ENSMUST00000032168 ScribQ80U72 1612 aa29.78■■■□□ 2.36
Sec61a1-201ENSMUST00000032168 Dcaf1Q80TR8 1506 aa29.34■■■□□ 2.29
Sec61a1-201ENSMUST00000032168 Ccdc180J3QNE4 1664 aa29.3■■■□□ 2.28
Sec61a1-201ENSMUST00000032168 Rb1cc1Q9ESK9 1588 aa29.25■■■□□ 2.27
Sec61a1-201ENSMUST00000032168 Kdm5dQ62240 1548 aa29.17■■■□□ 2.26
Sec61a1-201ENSMUST00000032168 Zcchc6Q5BLK4 1491 aaKnown RBP29.04■■■□□ 2.24
Sec61a1-201ENSMUST00000032168 NacadQ5SWP3 1504 aa28.86■■■□□ 2.21
Sec61a1-201ENSMUST00000032168 Ccdc136Q3TVA9 1136 aa28.83■■■□□ 2.21
Sec61a1-201ENSMUST00000032168 Baz1aO88379 1555 aa28.83■■■□□ 2.2
Sec61a1-201ENSMUST00000032168 Sycp2Q9CUU3 1500 aa28.27■■■□□ 2.12
Sec61a1-201ENSMUST00000032168 Crybg2B7ZCC2 1516 aa28.17■■■□□ 2.1
Sec61a1-201ENSMUST00000032168 Smarca2Q6DIC0 1577 aa28.16■■■□□ 2.1
Sec61a1-201ENSMUST00000032168 HrcG5E8J6 738 aa28.03■■■□□ 2.08
Sec61a1-201ENSMUST00000032168 Trim41Q5NCC3 630 aa27.95■■■□□ 2.07
Sec61a1-201ENSMUST00000032168 BicraF8VPZ9 1578 aa27.75■■■□□ 2.03
Sec61a1-201ENSMUST00000032168 Cecr2E9Q2Z1 1453 aa27.74■■■□□ 2.03
Sec61a1-201ENSMUST00000032168 Ehmt2Q9Z148 1263 aaKnown RBP27.68■■■□□ 2.02
Sec61a1-201ENSMUST00000032168 Cngb1E1AZ71 1325 aa27.54■■■□□ 2
Sec61a1-201ENSMUST00000032168 Brd4Q9ESU6 1400 aaKnown RBP27.48■■□□□ 1.99
Sec61a1-201ENSMUST00000032168 Synj1Q8CHC4 1574 aa27.39■■□□□ 1.98
Sec61a1-201ENSMUST00000032168 Chic1Q8CBW7 227 aa27.33■■□□□ 1.97
Sec61a1-201ENSMUST00000032168 Cep164Q5DU05 1446 aa27.33■■□□□ 1.97
Sec61a1-201ENSMUST00000032168 Rsf1E9PWW9 1441 aaKnown RBP27.25■■□□□ 1.95
Sec61a1-201ENSMUST00000032168 Esf1Q3V1V3 845 aaKnown RBP27.22■■□□□ 1.95
Sec61a1-201ENSMUST00000032168 CftrP26361 1476 aa27.19■■□□□ 1.94
Sec61a1-201ENSMUST00000032168 Gab3Q8BSM5 595 aa27.17■■□□□ 1.94
Sec61a1-201ENSMUST00000032168 Golga3P55937 1487 aa27.17■■□□□ 1.94
Sec61a1-201ENSMUST00000032168 Ccdc88bQ4QRL3 1481 aa27.14■■□□□ 1.93
Sec61a1-201ENSMUST00000032168 Acin1Q9JIX8 1338 aaKnown RBP27.08■■□□□ 1.93
Sec61a1-201ENSMUST00000032168 Rpgrip1Q9EPQ2 1331 aa27.05■■□□□ 1.92
Sec61a1-201ENSMUST00000032168 Smarca4Q3TKT4 1613 aaKnown RBP27.01■■□□□ 1.91
Sec61a1-201ENSMUST00000032168 Cttnbp2B9EJA2 1648 aa26.98■■□□□ 1.91
Sec61a1-201ENSMUST00000032168 Top2bQ64511 1612 aa26.84■■□□□ 1.89
Sec61a1-201ENSMUST00000032168 Cc2d2aQ8CFW7 1633 aa26.74■■□□□ 1.87
Sec61a1-201ENSMUST00000032168 Iqgap2Q3UQ44 1575 aa26.71■■□□□ 1.87
Sec61a1-201ENSMUST00000032168 Atad2bE9Q166 1460 aaKnown RBP26.57■■□□□ 1.84
Sec61a1-201ENSMUST00000032168 Pds5bQ4VA53 1446 aaKnown RBP26.45■■□□□ 1.83
Sec61a1-201ENSMUST00000032168 Fmn1Q05860 1466 aa26.44■■□□□ 1.82
Sec61a1-201ENSMUST00000032168 Top2aQ01320 1528 aaKnown RBP26.31■■□□□ 1.8
Sec61a1-201ENSMUST00000032168 Frmpd1A2AKB4 1549 aa26.25■■□□□ 1.79
Sec61a1-201ENSMUST00000032168 Rapgef2Q8CHG7 1496 aa26.24■■□□□ 1.79
Sec61a1-201ENSMUST00000032168 Myt1lP97500 1187 aa26.23■■□□□ 1.79
Sec61a1-201ENSMUST00000032168 Wdr62Q3U3T8 1523 aa26.16■■□□□ 1.78
Sec61a1-201ENSMUST00000032168 Npm2Q80W85 207 aa26.15■■□□□ 1.78
Sec61a1-201ENSMUST00000032168 Cep162Q6ZQ06 1403 aa26.09■■□□□ 1.77
Sec61a1-201ENSMUST00000032168 Il27Q8K3I6 234 aa26.08■■□□□ 1.77
Sec61a1-201ENSMUST00000032168 Mier1Q5UAK0 511 aa26.05■■□□□ 1.76
Sec61a1-201ENSMUST00000032168 TnnQ80Z71 1560 aa26.03■■□□□ 1.76
Sec61a1-201ENSMUST00000032168 Ercc6F8VPZ5 1481 aa26.03■■□□□ 1.76
Sec61a1-201ENSMUST00000032168 Kif15Q6P9L6 1387 aa25.98■■□□□ 1.75
Sec61a1-201ENSMUST00000032168 Unc13aQ4KUS2 1712 aa25.96■■□□□ 1.75
Sec61a1-201ENSMUST00000032168 UbtfP25976 765 aaKnown RBP25.95■■□□□ 1.75
Sec61a1-201ENSMUST00000032168 Lamc3Q9R0B6 1581 aa25.89■■□□□ 1.74
Sec61a1-201ENSMUST00000032168 PtprkP35822 1457 aa25.87■■□□□ 1.73
Sec61a1-201ENSMUST00000032168 Pcgf6Q99NA9 353 aa25.87■■□□□ 1.73
Sec61a1-201ENSMUST00000032168 Eif4g1Q6NZJ6 1600 aaKnown RBP25.78■■□□□ 1.72
Sec61a1-201ENSMUST00000032168 Zeb1Q64318 1117 aa25.73■■□□□ 1.71
Sec61a1-201ENSMUST00000032168 Plekhg3Q4VAC9 1341 aa25.72■■□□□ 1.71
Sec61a1-201ENSMUST00000032168 Clip1Q922J3 1391 aa25.72■■□□□ 1.71
Sec61a1-201ENSMUST00000032168 Camsap1A2AHC3 1581 aa25.72■■□□□ 1.71
Sec61a1-201ENSMUST00000032168 Arhgap35Q91YM2 1499 aa25.71■■□□□ 1.71
Sec61a1-201ENSMUST00000032168 Supt5hO55201 1082 aaKnown RBP25.7■■□□□ 1.7
Sec61a1-201ENSMUST00000032168 NefmP08553 848 aa25.65■■□□□ 1.7
Sec61a1-201ENSMUST00000032168 Thoc2B1AZI6 1594 aaKnown RBP25.64■■□□□ 1.7
Sec61a1-201ENSMUST00000032168 Ubl4bQ9CQ84 188 aa25.64■■□□□ 1.7
Sec61a1-201ENSMUST00000032168 Phldb1Q6PDH0 1371 aaKnown RBP25.63■■□□□ 1.69
Sec61a1-201ENSMUST00000032168 NrkQ9R0G8 1455 aa25.62■■□□□ 1.69
Sec61a1-201ENSMUST00000032168 Ap3b1Q9Z1T1 1105 aa25.6■■□□□ 1.69
Sec61a1-201ENSMUST00000032168 Shroom4Q1W617 1475 aa25.59■■□□□ 1.69
Sec61a1-201ENSMUST00000032168 Ccdc18Q640L5 1455 aa25.59■■□□□ 1.69
Sec61a1-201ENSMUST00000032168 Cux2P70298 1426 aa25.56■■□□□ 1.68
Sec61a1-201ENSMUST00000032168 Grin2bQ01097 1482 aa25.54■■□□□ 1.68
Sec61a1-201ENSMUST00000032168 Npm1Q61937 292 aaKnown RBP25.48■■□□□ 1.67
Sec61a1-201ENSMUST00000032168 Arap1Q4LDD4 1452 aa25.44■■□□□ 1.66
Sec61a1-201ENSMUST00000032168 Eea1Q8BL66 1411 aa25.41■■□□□ 1.66
Sec61a1-201ENSMUST00000032168 Setd5Q5XJV7 1441 aa25.41■■□□□ 1.66
Sec61a1-201ENSMUST00000032168 Baz1bQ9Z277 1479 aa25.41■■□□□ 1.66
Sec61a1-201ENSMUST00000032168 Mroh2bQ7M6Y6 1581 aa25.36■■□□□ 1.65
Sec61a1-201ENSMUST00000032168 Fam135aQ6NS59 1506 aa25.34■■□□□ 1.65
Sec61a1-201ENSMUST00000032168 Map3k1P53349 1493 aa25.33■■□□□ 1.65
Sec61a1-201ENSMUST00000032168 LrpprcQ6PB66 1392 aaKnown RBP25.3■■□□□ 1.64
Sec61a1-201ENSMUST00000032168 Arhgef5E9Q7D5 1581 aa25.26■■□□□ 1.63
Sec61a1-201ENSMUST00000032168 Duox2A2AQ99 1517 aa25.22■■□□□ 1.63
Sec61a1-201ENSMUST00000032168 Ncapd3Q6ZQK0 1506 aa25.21■■□□□ 1.63
Sec61a1-201ENSMUST00000032168 PogzQ8BZH4 1409 aaKnown RBP25.21■■□□□ 1.63
Sec61a1-201ENSMUST00000032168 Sall2Q9QX96 1004 aa25.19■■□□□ 1.62
Sec61a1-201ENSMUST00000032168 Dnajc5bQ9CQ94 199 aa25.19■■□□□ 1.62
Sec61a1-201ENSMUST00000032168 Efcab5A0JP43 1406 aa25.19■■□□□ 1.62
Sec61a1-201ENSMUST00000032168 Ankrd26Q811D2 1581 aa25.18■■□□□ 1.62
Sec61a1-201ENSMUST00000032168 AqrQ8CFQ3 1481 aaKnown RBP25.17■■□□□ 1.62
Sec61a1-201ENSMUST00000032168 Dhx29Q6PGC1 1365 aaKnown RBP25.13■■□□□ 1.61
Sec61a1-201ENSMUST00000032168 Lmod2Q3UHZ5 550 aa25.11■■□□□ 1.61
Sec61a1-201ENSMUST00000032168 Aebp2Q9Z248 504 aaKnown RBP25.11■■□□□ 1.61
Sec61a1-201ENSMUST00000032168 BlmO88700 1416 aa25.1■■□□□ 1.61
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms