RNA–Protein interactions for RNA: ENSMUST00000032134.8

Rab43-201, Transcript of Ras-related protein Rab-43, mousemouse

TSL 1 (best) BASIC

Gene Rab43, Length 4,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43-201ENSMUST00000032134 Rhox8Q6VSS7 320 aa15.57■□□□□ 0.08
Rab43-201ENSMUST00000032134 NischQ80TM9 1593 aa15.47■□□□□ 0.07
Rab43-201ENSMUST00000032134 Gm35339A0A140LHH9 1649 aa15.41■□□□□ 0.06
Rab43-201ENSMUST00000032134 Abcc9P70170 1546 aa15.05■□□□□ -0
Rab43-201ENSMUST00000032134 Abcc8B2RUS7 1588 aa14.69□□□□□ -0.06
Rab43-201ENSMUST00000032134 Rtl1Q7M732 1744 aa14.39□□□□□ -0.11
Rab43-201ENSMUST00000032134 Dcaf1Q80TR8 1506 aa14.12□□□□□ -0.15
Rab43-201ENSMUST00000032134 Rpgrip1Q9EPQ2 1331 aa14.02□□□□□ -0.17
Rab43-201ENSMUST00000032134 Ehmt2Q9Z148 1263 aaKnown RBP13.89□□□□□ -0.19
Rab43-201ENSMUST00000032134 Ccdc180J3QNE4 1664 aa13.89□□□□□ -0.19
Rab43-201ENSMUST00000032134 Ccdc136Q3TVA9 1136 aa13.88□□□□□ -0.19
Rab43-201ENSMUST00000032134 Esf1Q3V1V3 845 aaKnown RBP13.68□□□□□ -0.22
Rab43-201ENSMUST00000032134 NacadQ5SWP3 1504 aa13.67□□□□□ -0.22
Rab43-201ENSMUST00000032134 Cngb1E1AZ71 1325 aa13.65□□□□□ -0.22
Rab43-201ENSMUST00000032134 Trim41Q5NCC3 630 aa13.58□□□□□ -0.23
Rab43-201ENSMUST00000032134 Crybg2B7ZCC2 1516 aa13.56□□□□□ -0.24
Rab43-201ENSMUST00000032134 Rb1cc1Q9ESK9 1588 aa13.56□□□□□ -0.24
Rab43-201ENSMUST00000032134 Gab3Q8BSM5 595 aa13.53□□□□□ -0.24
Rab43-201ENSMUST00000032134 Baz1aO88379 1555 aa13.51□□□□□ -0.25
Rab43-201ENSMUST00000032134 ScribQ80U72 1612 aa13.5□□□□□ -0.25
Rab43-201ENSMUST00000032134 Kdm5dQ62240 1548 aa13.43□□□□□ -0.26
Rab43-201ENSMUST00000032134 Las1lA2BE28 776 aaKnown RBP13.4□□□□□ -0.26
Rab43-201ENSMUST00000032134 Wdr66E9Q743 1299 aa13.39□□□□□ -0.27
Rab43-201ENSMUST00000032134 Zeb1Q64318 1117 aa13.35□□□□□ -0.27
Rab43-201ENSMUST00000032134 Npm2Q80W85 207 aa13.35□□□□□ -0.27
Rab43-201ENSMUST00000032134 Ube2uB1AUC4 352 aa13.29□□□□□ -0.28
Rab43-201ENSMUST00000032134 Myt1lP97500 1187 aa13.27□□□□□ -0.28
Rab43-201ENSMUST00000032134 Sycp2Q9CUU3 1500 aa13.22□□□□□ -0.29
Rab43-201ENSMUST00000032134 HrcG5E8J6 738 aa13.19□□□□□ -0.3
Rab43-201ENSMUST00000032134 Zcchc6Q5BLK4 1491 aaKnown RBP13.12□□□□□ -0.31
Rab43-201ENSMUST00000032134 Acin1Q9JIX8 1338 aaKnown RBP13.11□□□□□ -0.31
Rab43-201ENSMUST00000032134 Smarca2Q6DIC0 1577 aa13.07□□□□□ -0.32
Rab43-201ENSMUST00000032134 Brd4Q9ESU6 1400 aaKnown RBP13.07□□□□□ -0.32
Rab43-201ENSMUST00000032134 NefmP08553 848 aa13.02□□□□□ -0.33
Rab43-201ENSMUST00000032134 UbtfP25976 765 aaKnown RBP13.02□□□□□ -0.33
Rab43-201ENSMUST00000032134 Pelp1Q9DBD5 1123 aaKnown RBP12.91□□□□□ -0.34
Rab43-201ENSMUST00000032134 Il27Q8K3I6 234 aa12.87□□□□□ -0.35
Rab43-201ENSMUST00000032134 Cep164Q5DU05 1446 aa12.74□□□□□ -0.37
Rab43-201ENSMUST00000032134 Pds5bQ4VA53 1446 aaKnown RBP12.72□□□□□ -0.37
Rab43-201ENSMUST00000032134 Stra8P70278 393 aa12.72□□□□□ -0.37
Rab43-201ENSMUST00000032134 Cttnbp2B9EJA2 1648 aa12.7□□□□□ -0.38
Rab43-201ENSMUST00000032134 Smarca4Q3TKT4 1613 aaKnown RBP12.7□□□□□ -0.38
Rab43-201ENSMUST00000032134 CenpbP27790 599 aa12.7□□□□□ -0.38
Rab43-201ENSMUST00000032134 Golga3P55937 1487 aa12.68□□□□□ -0.38
Rab43-201ENSMUST00000032134 Slc24a1Q91WD8 1130 aa12.66□□□□□ -0.38
Rab43-201ENSMUST00000032134 Pcgf6Q99NA9 353 aa12.64□□□□□ -0.39
Rab43-201ENSMUST00000032134 Fam50aQ9WV03 339 aaKnown RBP12.62□□□□□ -0.39
Rab43-201ENSMUST00000032134 Ap3b1Q9Z1T1 1105 aa12.61□□□□□ -0.39
Rab43-201ENSMUST00000032134 Atad2bE9Q166 1460 aaKnown RBP12.61□□□□□ -0.39
Rab43-201ENSMUST00000032134 BicraF8VPZ9 1578 aa12.61□□□□□ -0.39
Rab43-201ENSMUST00000032134 Cdk11bP24788 784 aaKnown RBP12.61□□□□□ -0.39
Rab43-201ENSMUST00000032134 CftrP26361 1476 aa12.58□□□□□ -0.4
Rab43-201ENSMUST00000032134 Baz1bQ9Z277 1479 aa12.55□□□□□ -0.4
Rab43-201ENSMUST00000032134 Ercc6F8VPZ5 1481 aa12.53□□□□□ -0.4
Rab43-201ENSMUST00000032134 NclP09405 707 aaKnown RBP12.51□□□□□ -0.41
Rab43-201ENSMUST00000032134 Synj1Q8CHC4 1574 aa12.5□□□□□ -0.41
Rab43-201ENSMUST00000032134 Nop58Q6DFW4 536 aaKnown RBP12.49□□□□□ -0.41
Rab43-201ENSMUST00000032134 Neurod1Q60867 357 aa12.48□□□□□ -0.41
Rab43-201ENSMUST00000032134 Fmn1Q05860 1466 aa12.48□□□□□ -0.41
Rab43-201ENSMUST00000032134 Ppargc1bQ8VHJ7 1014 aa12.46□□□□□ -0.41
Rab43-201ENSMUST00000032134 Iqgap2Q3UQ44 1575 aa12.45□□□□□ -0.42
Rab43-201ENSMUST00000032134 Supt5hO55201 1082 aaKnown RBP12.44□□□□□ -0.42
Rab43-201ENSMUST00000032134 Mier1Q5UAK0 511 aa12.44□□□□□ -0.42
Rab43-201ENSMUST00000032134 NrdcQ8BHG1 1161 aa12.44□□□□□ -0.42
Rab43-201ENSMUST00000032134 Cecr2E9Q2Z1 1453 aa12.43□□□□□ -0.42
Rab43-201ENSMUST00000032134 TonslQ6NZL6 1363 aa12.43□□□□□ -0.42
Rab43-201ENSMUST00000032134 Anp32bQ9EST5 272 aaKnown RBP12.42□□□□□ -0.42
Rab43-201ENSMUST00000032134 Npm1Q61937 292 aaKnown RBP12.41□□□□□ -0.42
Rab43-201ENSMUST00000032134 Top2bQ64511 1612 aa12.4□□□□□ -0.42
Rab43-201ENSMUST00000032134 Tnnt3Q9QZ47 272 aa12.38□□□□□ -0.43
Rab43-201ENSMUST00000032134 Ubl4bQ9CQ84 188 aa12.36□□□□□ -0.43
Rab43-201ENSMUST00000032134 Rsf1E9PWW9 1441 aaKnown RBP12.35□□□□□ -0.43
Rab43-201ENSMUST00000032134 Plekhg3Q4VAC9 1341 aa12.33□□□□□ -0.43
Rab43-201ENSMUST00000032134 Lmod2Q3UHZ5 550 aa12.33□□□□□ -0.44
Rab43-201ENSMUST00000032134 Amer1Q7TS75 1132 aa12.31□□□□□ -0.44
Rab43-201ENSMUST00000032134 Os9Q8K2C7 672 aa12.31□□□□□ -0.44
Rab43-201ENSMUST00000032134 Eif5bQ05D44 1216 aaKnown RBP12.28□□□□□ -0.44
Rab43-201ENSMUST00000032134 NeflP08551 543 aa12.24□□□□□ -0.45
Rab43-201ENSMUST00000032134 Wdr62Q3U3T8 1523 aa12.23□□□□□ -0.45
Rab43-201ENSMUST00000032134 Ccdc18Q640L5 1455 aa12.23□□□□□ -0.45
Rab43-201ENSMUST00000032134 Chic1Q8CBW7 227 aa12.23□□□□□ -0.45
Rab43-201ENSMUST00000032134 Top2aQ01320 1528 aaKnown RBP12.2□□□□□ -0.46
Rab43-201ENSMUST00000032134 Phldb1Q6PDH0 1371 aaKnown RBP12.19□□□□□ -0.46
Rab43-201ENSMUST00000032134 ClspnQ80YR7 1315 aa12.19□□□□□ -0.46
Rab43-201ENSMUST00000032134 Zbtb7cQ8VCZ7 619 aa12.18□□□□□ -0.46
Rab43-201ENSMUST00000032134 TnnQ80Z71 1560 aa12.16□□□□□ -0.46
Rab43-201ENSMUST00000032134 Lamc3Q9R0B6 1581 aa12.15□□□□□ -0.46
Rab43-201ENSMUST00000032134 Clip1Q922J3 1391 aa12.14□□□□□ -0.47
Rab43-201ENSMUST00000032134 Eid3Q3V124 375 aa12.14□□□□□ -0.47
Rab43-201ENSMUST00000032134 Hnrnpul2Q00PI9 745 aaKnown RBP12.13□□□□□ -0.47
Rab43-201ENSMUST00000032134 Rapgef2Q8CHG7 1496 aa12.12□□□□□ -0.47
Rab43-201ENSMUST00000032134 Myt1Q8CFC2 1127 aa12.11□□□□□ -0.47
Rab43-201ENSMUST00000032134 Ttbk1Q6PCN3 1308 aa12.11□□□□□ -0.47
Rab43-201ENSMUST00000032134 Frmpd1A2AKB4 1549 aa12.1□□□□□ -0.47
Rab43-201ENSMUST00000032134 Ccdc88bQ4QRL3 1481 aa12.1□□□□□ -0.47
Rab43-201ENSMUST00000032134 Cc2d2aQ8CFW7 1633 aa12.08□□□□□ -0.48
Rab43-201ENSMUST00000032134 Kif15Q6P9L6 1387 aa12.07□□□□□ -0.48
Rab43-201ENSMUST00000032134 4933416C03RikQ3V063 378 aa12.06□□□□□ -0.48
Rab43-201ENSMUST00000032134 Map3k1P53349 1493 aa12.06□□□□□ -0.48
Rab43-201ENSMUST00000032134 NrkQ9R0G8 1455 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms