RNA–Protein interactions for RNA: ENSMUST00000031798.13

Ssmem1-202, Transcript of RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssmem1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1-202ENSMUST00000031798 Mapk8ip2Q9ERE9 830 aa27.62■■■□□ 2.01
Ssmem1-202ENSMUST00000031798 Chic1Q8CBW7 227 aa27.2■■□□□ 1.94
Ssmem1-202ENSMUST00000031798 Phf23Q8BSN5 401 aa24.51■■□□□ 1.51
Ssmem1-202ENSMUST00000031798 Gab3Q8BSM5 595 aa23.04■■□□□ 1.28
Ssmem1-202ENSMUST00000031798 Plppr3Q7TPB0 716 aa22.76■■□□□ 1.23
Ssmem1-202ENSMUST00000031798 Senp3Q9EP97 568 aaKnown RBP22.06■■□□□ 1.12
Ssmem1-202ENSMUST00000031798 Fam163aQ8CAA5 168 aa20.83■□□□□ 0.93
Ssmem1-202ENSMUST00000031798 Kcna4Q61423 654 aa20.22■□□□□ 0.83
Ssmem1-202ENSMUST00000031798 Hoxd11P23813 323 aa19.72■□□□□ 0.75
Ssmem1-202ENSMUST00000031798 Trap1aP19473 224 aa19.33■□□□□ 0.68
Ssmem1-202ENSMUST00000031798 Znf219Q6IQX8 726 aa19.06■□□□□ 0.64
Ssmem1-202ENSMUST00000031798 ArsiQ32KI9 573 aa18.93■□□□□ 0.62
Ssmem1-202ENSMUST00000031798 Chrna2Q91X60 512 aa18.45■□□□□ 0.54
Ssmem1-202ENSMUST00000031798 Rsph4aQ8BYM7 716 aa18.36■□□□□ 0.53
Ssmem1-202ENSMUST00000031798 Rimbp2Q80U40 1072 aa18.25■□□□□ 0.51
Ssmem1-202ENSMUST00000031798 Slc34a2Q9DBP0 697 aa18.2■□□□□ 0.5
Ssmem1-202ENSMUST00000031798 Dnajc5bQ9CQ94 199 aa18.14■□□□□ 0.49
Ssmem1-202ENSMUST00000031798 Akt1s1Q9D1F4 257 aa18.1■□□□□ 0.49
Ssmem1-202ENSMUST00000031798 GapdhsQ64467 440 aa18.03■□□□□ 0.48
Ssmem1-202ENSMUST00000031798 Dmrt2Q8BG36 561 aa17.97■□□□□ 0.47
Ssmem1-202ENSMUST00000031798 Atf5O70191 283 aa17.53■□□□□ 0.4
Ssmem1-202ENSMUST00000031798 Hs6st3Q9QYK4 470 aa17.14■□□□□ 0.33
Ssmem1-202ENSMUST00000031798 Ppp4r2Q0VGB7 417 aa17.11■□□□□ 0.33
Ssmem1-202ENSMUST00000031798 Bach1P97302 739 aa16.99■□□□□ 0.31
Ssmem1-202ENSMUST00000031798 Znf704Q9ERQ3 566 aa16.98■□□□□ 0.31
Ssmem1-202ENSMUST00000031798 Ppargc1bQ8VHJ7 1014 aa16.96■□□□□ 0.31
Ssmem1-202ENSMUST00000031798 Slc4a5E9Q3M5 1116 aa16.91■□□□□ 0.3
Ssmem1-202ENSMUST00000031798 Sox12Q04890 314 aa16.84■□□□□ 0.29
Ssmem1-202ENSMUST00000031798 Slc4a1apE9PX68 744 aa16.63■□□□□ 0.25
Ssmem1-202ENSMUST00000031798 1700123L14RikQ3V2K7 440 aa16.35■□□□□ 0.21
Ssmem1-202ENSMUST00000031798 WdpcpQ8C456 722 aa16.33■□□□□ 0.2
Ssmem1-202ENSMUST00000031798 Egfem1Q8C088 590 aa16.29■□□□□ 0.2
Ssmem1-202ENSMUST00000031798 Zbtb7aO88939 569 aaKnown RBP16.25■□□□□ 0.19
Ssmem1-202ENSMUST00000031798 Grwd1Q810D6 446 aaKnown RBP16.2■□□□□ 0.18
Ssmem1-202ENSMUST00000031798 Cacnb1Q8R3Z5 597 aa16.1■□□□□ 0.17
Ssmem1-202ENSMUST00000031798 Abcb7Q61102 752 aaKnown RBP15.97■□□□□ 0.15
Ssmem1-202ENSMUST00000031798 Znf703P0CL69 594 aa15.93■□□□□ 0.14
Ssmem1-202ENSMUST00000031798 Ildr2B5TVM2 661 aa15.92■□□□□ 0.14
Ssmem1-202ENSMUST00000031798 G430095P16RikE9Q913 147 aa15.92■□□□□ 0.14
Ssmem1-202ENSMUST00000031798 Ifnlr1Q8CGK5 535 aa15.89■□□□□ 0.13
Ssmem1-202ENSMUST00000031798 Rnf216P58283 853 aa15.67■□□□□ 0.1
Ssmem1-202ENSMUST00000031798 Prr29B1ARI9 187 aa15.64■□□□□ 0.09
Ssmem1-202ENSMUST00000031798 C1qtnf12Q8R2Z0 308 aa15.62■□□□□ 0.09
Ssmem1-202ENSMUST00000031798 Nkx1-1G3UXB3 402 aa15.6■□□□□ 0.09
Ssmem1-202ENSMUST00000031798 Kcnn1Q9EQR3 537 aa15.59■□□□□ 0.09
Ssmem1-202ENSMUST00000031798 Gtpbp6Q3U6U5 514 aa15.52■□□□□ 0.08
Ssmem1-202ENSMUST00000031798 Zbtb12Q9Z150 459 aa15.48■□□□□ 0.07
Ssmem1-202ENSMUST00000031798 Ms4a5Q810P8 197 aa15.46■□□□□ 0.07
Ssmem1-202ENSMUST00000031798 Cdca7Q9D0M2 382 aa15.36■□□□□ 0.05
Ssmem1-202ENSMUST00000031798 Pip4p2Q9CZX7 257 aa15.3■□□□□ 0.04
Ssmem1-202ENSMUST00000031798 Kank3Q9Z1P7 791 aa15.14■□□□□ 0.01
Ssmem1-202ENSMUST00000031798 Pitpnm1O35954 1243 aa15.09■□□□□ 0.01
Ssmem1-202ENSMUST00000031798 Trim35Q8C006 501 aa15.01□□□□□ -0.01
Ssmem1-202ENSMUST00000031798 Clcn6O35454 870 aa14.99□□□□□ -0.01
Ssmem1-202ENSMUST00000031798 Riok3Q9DBU3 519 aaKnown RBP14.97□□□□□ -0.01
Ssmem1-202ENSMUST00000031798 Trim41Q5NCC3 630 aa14.91□□□□□ -0.02
Ssmem1-202ENSMUST00000031798 Nlrp6Q91WS2 869 aa14.84□□□□□ -0.03
Ssmem1-202ENSMUST00000031798 Fbln2P37889 1221 aa14.82□□□□□ -0.04
Ssmem1-202ENSMUST00000031798 Npm3Q9CPP0 175 aaKnown RBP14.68□□□□□ -0.06
Ssmem1-202ENSMUST00000031798 MyclP10166 368 aa14.65□□□□□ -0.06
Ssmem1-202ENSMUST00000031798 Gm35339A0A140LHH9 1649 aa14.63□□□□□ -0.07
Ssmem1-202ENSMUST00000031798 Npm2Q80W85 207 aa14.61□□□□□ -0.07
Ssmem1-202ENSMUST00000031798 Foxp4Q9DBY0 795 aaKnown RBP14.53□□□□□ -0.08
Ssmem1-202ENSMUST00000031798 Fam71e1A1L3C1 212 aa14.52□□□□□ -0.09
Ssmem1-202ENSMUST00000031798 MpndQ3TV65 487 aa14.47□□□□□ -0.09
Ssmem1-202ENSMUST00000031798 NischQ80TM9 1593 aa14.44□□□□□ -0.1
Ssmem1-202ENSMUST00000031798 ArntlQ9WTL8 632 aa14.44□□□□□ -0.1
Ssmem1-202ENSMUST00000031798 Skida1Q80YR3 822 aa14.38□□□□□ -0.11
Ssmem1-202ENSMUST00000031798 Cadps2Q8BYR5 1297 aa14.33□□□□□ -0.12
Ssmem1-202ENSMUST00000031798 Pde4cQ3UEI1 686 aa14.32□□□□□ -0.12
Ssmem1-202ENSMUST00000031798 Nyap1Q6PFX7 833 aa14.31□□□□□ -0.12
Ssmem1-202ENSMUST00000031798 Dok7Q18PE0 504 aa14.22□□□□□ -0.13
Ssmem1-202ENSMUST00000031798 AcrbpQ3V140 540 aa14.22□□□□□ -0.13
Ssmem1-202ENSMUST00000031798 Evx2P49749 475 aa14.16□□□□□ -0.14
Ssmem1-202ENSMUST00000031798 Styxl1Q9DAR2 321 aa14.14□□□□□ -0.15
Ssmem1-202ENSMUST00000031798 SnphQ80U23 495 aa14.1□□□□□ -0.15
Ssmem1-202ENSMUST00000031798 Prm3Q62100 101 aa14.06□□□□□ -0.16
Ssmem1-202ENSMUST00000031798 Jarid2Q62315 1234 aa14.04□□□□□ -0.16
Ssmem1-202ENSMUST00000031798 Abcc8B2RUS7 1588 aa13.99□□□□□ -0.17
Ssmem1-202ENSMUST00000031798 Lrrc43Q3V0L5 667 aa13.97□□□□□ -0.17
Ssmem1-202ENSMUST00000031798 Abcc9P70170 1546 aa13.95□□□□□ -0.18
Ssmem1-202ENSMUST00000031798 Ppp1r37Q8BKR5 712 aa13.94□□□□□ -0.18
Ssmem1-202ENSMUST00000031798 Map3k10Q66L42 940 aa13.84□□□□□ -0.19
Ssmem1-202ENSMUST00000031798 Tshz2Q68FE9 1030 aa13.82□□□□□ -0.2
Ssmem1-202ENSMUST00000031798 Zranb1Q7M760 708 aa13.81□□□□□ -0.2
Ssmem1-202ENSMUST00000031798 Gjc2Q8BQU6 440 aa13.81□□□□□ -0.2
Ssmem1-202ENSMUST00000031798 Fxr2Q9WVR4 673 aaKnown RBP13.81□□□□□ -0.2
Ssmem1-202ENSMUST00000031798 Ehmt2Q9Z148 1263 aaKnown RBP13.78□□□□□ -0.2
Ssmem1-202ENSMUST00000031798 Sra1Q80VJ2 232 aa13.72□□□□□ -0.21
Ssmem1-202ENSMUST00000031798 Rtn4Q99P72 1162 aaKnown RBP13.62□□□□□ -0.23
Ssmem1-202ENSMUST00000031798 Tcf3P15806 651 aa13.61□□□□□ -0.23
Ssmem1-202ENSMUST00000031798 CrebzfQ91ZR3 358 aa13.59□□□□□ -0.23
Ssmem1-202ENSMUST00000031798 Kiaa1522A2A7S8 1013 aa13.57□□□□□ -0.24
Ssmem1-202ENSMUST00000031798 Znf710Q3U288 666 aa13.56□□□□□ -0.24
Ssmem1-202ENSMUST00000031798 Hnrnpul2Q00PI9 745 aaKnown RBP13.55□□□□□ -0.24
Ssmem1-202ENSMUST00000031798 ScribQ80U72 1612 aa13.54□□□□□ -0.24
Ssmem1-202ENSMUST00000031798 Lhx8O35652 367 aa13.46□□□□□ -0.25
Ssmem1-202ENSMUST00000031798 TMEM121BQ99MX7 572 aa13.43□□□□□ -0.26
Ssmem1-202ENSMUST00000031798 PygbQ8CI94 843 aaKnown RBP13.42□□□□□ -0.26
Ssmem1-202ENSMUST00000031798 Krtap4-1Q3UUY3 169 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 186.6 ms