RNA–Protein interactions for RNA: ENSMUST00000001536.8

Nkx2-1-201, Transcript of Homeobox protein Nkx-2.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx2-1, Length 2,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1-201ENSMUST00000001536 NischQ80TM9 1593 aa31.5■■■□□ 2.63
Nkx2-1-201ENSMUST00000001536 Gm35339A0A140LHH9 1649 aa30.78■■■□□ 2.52
Nkx2-1-201ENSMUST00000001536 Abcc9P70170 1546 aa30.5■■■□□ 2.47
Nkx2-1-201ENSMUST00000001536 Abcc8B2RUS7 1588 aa29.9■■■□□ 2.38
Nkx2-1-201ENSMUST00000001536 Rhox8Q6VSS7 320 aa29.42■■■□□ 2.3
Nkx2-1-201ENSMUST00000001536 Rtl1Q7M732 1744 aa28.35■■■□□ 2.13
Nkx2-1-201ENSMUST00000001536 ScribQ80U72 1612 aa27.95■■■□□ 2.07
Nkx2-1-201ENSMUST00000001536 Ccdc180J3QNE4 1664 aa27.94■■■□□ 2.06
Nkx2-1-201ENSMUST00000001536 Dcaf1Q80TR8 1506 aa27.69■■■□□ 2.02
Nkx2-1-201ENSMUST00000001536 Zcchc6Q5BLK4 1491 aaKnown RBP27.6■■■□□ 2.01
Nkx2-1-201ENSMUST00000001536 Rb1cc1Q9ESK9 1588 aa27.6■■■□□ 2.01
Nkx2-1-201ENSMUST00000001536 Kdm5dQ62240 1548 aa27.43■■□□□ 1.98
Nkx2-1-201ENSMUST00000001536 Ccdc136Q3TVA9 1136 aa27.36■■□□□ 1.97
Nkx2-1-201ENSMUST00000001536 Baz1aO88379 1555 aa27.21■■□□□ 1.95
Nkx2-1-201ENSMUST00000001536 NacadQ5SWP3 1504 aa27.15■■□□□ 1.94
Nkx2-1-201ENSMUST00000001536 HrcG5E8J6 738 aa26.76■■□□□ 1.87
Nkx2-1-201ENSMUST00000001536 Crybg2B7ZCC2 1516 aa26.59■■□□□ 1.85
Nkx2-1-201ENSMUST00000001536 Smarca2Q6DIC0 1577 aa26.58■■□□□ 1.85
Nkx2-1-201ENSMUST00000001536 Sycp2Q9CUU3 1500 aa26.58■■□□□ 1.85
Nkx2-1-201ENSMUST00000001536 Trim41Q5NCC3 630 aa26.54■■□□□ 1.84
Nkx2-1-201ENSMUST00000001536 Ehmt2Q9Z148 1263 aaKnown RBP26.51■■□□□ 1.83
Nkx2-1-201ENSMUST00000001536 Cecr2E9Q2Z1 1453 aa26.16■■□□□ 1.78
Nkx2-1-201ENSMUST00000001536 Rpgrip1Q9EPQ2 1331 aa26.16■■□□□ 1.78
Nkx2-1-201ENSMUST00000001536 Cngb1E1AZ71 1325 aa26.12■■□□□ 1.77
Nkx2-1-201ENSMUST00000001536 Acin1Q9JIX8 1338 aaKnown RBP26.07■■□□□ 1.76
Nkx2-1-201ENSMUST00000001536 BicraF8VPZ9 1578 aa26.06■■□□□ 1.76
Nkx2-1-201ENSMUST00000001536 Cep164Q5DU05 1446 aa26.01■■□□□ 1.75
Nkx2-1-201ENSMUST00000001536 Brd4Q9ESU6 1400 aaKnown RBP25.99■■□□□ 1.75
Nkx2-1-201ENSMUST00000001536 Chic1Q8CBW7 227 aa25.96■■□□□ 1.75
Nkx2-1-201ENSMUST00000001536 Rsf1E9PWW9 1441 aaKnown RBP25.86■■□□□ 1.73
Nkx2-1-201ENSMUST00000001536 Synj1Q8CHC4 1574 aa25.85■■□□□ 1.73
Nkx2-1-201ENSMUST00000001536 Gab3Q8BSM5 595 aa25.84■■□□□ 1.73
Nkx2-1-201ENSMUST00000001536 Esf1Q3V1V3 845 aaKnown RBP25.77■■□□□ 1.72
Nkx2-1-201ENSMUST00000001536 Ccdc88bQ4QRL3 1481 aa25.73■■□□□ 1.71
Nkx2-1-201ENSMUST00000001536 Golga3P55937 1487 aa25.72■■□□□ 1.71
Nkx2-1-201ENSMUST00000001536 CftrP26361 1476 aa25.67■■□□□ 1.7
Nkx2-1-201ENSMUST00000001536 Cttnbp2B9EJA2 1648 aa25.44■■□□□ 1.66
Nkx2-1-201ENSMUST00000001536 Smarca4Q3TKT4 1613 aaKnown RBP25.41■■□□□ 1.66
Nkx2-1-201ENSMUST00000001536 Top2bQ64511 1612 aa25.37■■□□□ 1.65
Nkx2-1-201ENSMUST00000001536 Cc2d2aQ8CFW7 1633 aa25.25■■□□□ 1.63
Nkx2-1-201ENSMUST00000001536 Iqgap2Q3UQ44 1575 aa25.12■■□□□ 1.61
Nkx2-1-201ENSMUST00000001536 Fmn1Q05860 1466 aa25.02■■□□□ 1.6
Nkx2-1-201ENSMUST00000001536 Pcgf6Q99NA9 353 aa24.99■■□□□ 1.59
Nkx2-1-201ENSMUST00000001536 Atad2bE9Q166 1460 aaKnown RBP24.97■■□□□ 1.59
Nkx2-1-201ENSMUST00000001536 Mier1Q5UAK0 511 aa24.92■■□□□ 1.58
Nkx2-1-201ENSMUST00000001536 Myt1lP97500 1187 aa24.91■■□□□ 1.58
Nkx2-1-201ENSMUST00000001536 Top2aQ01320 1528 aaKnown RBP24.9■■□□□ 1.58
Nkx2-1-201ENSMUST00000001536 Rapgef2Q8CHG7 1496 aa24.89■■□□□ 1.58
Nkx2-1-201ENSMUST00000001536 Pds5bQ4VA53 1446 aaKnown RBP24.85■■□□□ 1.57
Nkx2-1-201ENSMUST00000001536 Npm2Q80W85 207 aa24.81■■□□□ 1.56
Nkx2-1-201ENSMUST00000001536 UbtfP25976 765 aaKnown RBP24.76■■□□□ 1.55
Nkx2-1-201ENSMUST00000001536 Cep162Q6ZQ06 1403 aa24.75■■□□□ 1.55
Nkx2-1-201ENSMUST00000001536 Supt5hO55201 1082 aaKnown RBP24.75■■□□□ 1.55
Nkx2-1-201ENSMUST00000001536 Zeb1Q64318 1117 aa24.7■■□□□ 1.54
Nkx2-1-201ENSMUST00000001536 Frmpd1A2AKB4 1549 aa24.68■■□□□ 1.54
Nkx2-1-201ENSMUST00000001536 Il27Q8K3I6 234 aa24.64■■□□□ 1.53
Nkx2-1-201ENSMUST00000001536 NefmP08553 848 aa24.62■■□□□ 1.53
Nkx2-1-201ENSMUST00000001536 Wdr62Q3U3T8 1523 aa24.59■■□□□ 1.53
Nkx2-1-201ENSMUST00000001536 TnnQ80Z71 1560 aa24.55■■□□□ 1.52
Nkx2-1-201ENSMUST00000001536 Kif15Q6P9L6 1387 aa24.49■■□□□ 1.51
Nkx2-1-201ENSMUST00000001536 Plekhg3Q4VAC9 1341 aa24.46■■□□□ 1.51
Nkx2-1-201ENSMUST00000001536 PtprkP35822 1457 aa24.46■■□□□ 1.51
Nkx2-1-201ENSMUST00000001536 Clip1Q922J3 1391 aa24.44■■□□□ 1.5
Nkx2-1-201ENSMUST00000001536 Ercc6F8VPZ5 1481 aa24.44■■□□□ 1.5
Nkx2-1-201ENSMUST00000001536 Eif4g1Q6NZJ6 1600 aaKnown RBP24.41■■□□□ 1.5
Nkx2-1-201ENSMUST00000001536 Lamc3Q9R0B6 1581 aa24.4■■□□□ 1.5
Nkx2-1-201ENSMUST00000001536 Unc13aQ4KUS2 1712 aa24.36■■□□□ 1.49
Nkx2-1-201ENSMUST00000001536 Arhgap35Q91YM2 1499 aa24.35■■□□□ 1.49
Nkx2-1-201ENSMUST00000001536 Ap3b1Q9Z1T1 1105 aa24.3■■□□□ 1.48
Nkx2-1-201ENSMUST00000001536 Camsap1A2AHC3 1581 aa24.25■■□□□ 1.47
Nkx2-1-201ENSMUST00000001536 NrkQ9R0G8 1455 aa24.24■■□□□ 1.47
Nkx2-1-201ENSMUST00000001536 Sall2Q9QX96 1004 aa24.22■■□□□ 1.47
Nkx2-1-201ENSMUST00000001536 Shroom4Q1W617 1475 aa24.19■■□□□ 1.46
Nkx2-1-201ENSMUST00000001536 Ccdc18Q640L5 1455 aa24.15■■□□□ 1.46
Nkx2-1-201ENSMUST00000001536 Ubl4bQ9CQ84 188 aa24.14■■□□□ 1.45
Nkx2-1-201ENSMUST00000001536 Eea1Q8BL66 1411 aa24.13■■□□□ 1.45
Nkx2-1-201ENSMUST00000001536 Arap1Q4LDD4 1452 aa24.12■■□□□ 1.45
Nkx2-1-201ENSMUST00000001536 Setd5Q5XJV7 1441 aa24.11■■□□□ 1.45
Nkx2-1-201ENSMUST00000001536 Grin2bQ01097 1482 aa24.11■■□□□ 1.45
Nkx2-1-201ENSMUST00000001536 Phldb1Q6PDH0 1371 aaKnown RBP24.1■■□□□ 1.45
Nkx2-1-201ENSMUST00000001536 Las1lA2BE28 776 aaKnown RBP24.07■■□□□ 1.44
Nkx2-1-201ENSMUST00000001536 Aebp2Q9Z248 504 aaKnown RBP24.07■■□□□ 1.44
Nkx2-1-201ENSMUST00000001536 Cux2P70298 1426 aa24.07■■□□□ 1.44
Nkx2-1-201ENSMUST00000001536 Wdr66E9Q743 1299 aa24.05■■□□□ 1.44
Nkx2-1-201ENSMUST00000001536 Npm1Q61937 292 aaKnown RBP24.04■■□□□ 1.44
Nkx2-1-201ENSMUST00000001536 Baz1bQ9Z277 1479 aa24.01■■□□□ 1.43
Nkx2-1-201ENSMUST00000001536 Ncapd3Q6ZQK0 1506 aa24.01■■□□□ 1.43
Nkx2-1-201ENSMUST00000001536 Thoc2B1AZI6 1594 aaKnown RBP23.99■■□□□ 1.43
Nkx2-1-201ENSMUST00000001536 Mroh2bQ7M6Y6 1581 aa23.99■■□□□ 1.43
Nkx2-1-201ENSMUST00000001536 Map3k1P53349 1493 aa23.98■■□□□ 1.43
Nkx2-1-201ENSMUST00000001536 Arhgef5E9Q7D5 1581 aa23.96■■□□□ 1.43
Nkx2-1-201ENSMUST00000001536 Ppargc1bQ8VHJ7 1014 aa23.96■■□□□ 1.43
Nkx2-1-201ENSMUST00000001536 Neurod1Q60867 357 aa23.95■■□□□ 1.42
Nkx2-1-201ENSMUST00000001536 TonslQ6NZL6 1363 aa23.92■■□□□ 1.42
Nkx2-1-201ENSMUST00000001536 LrpprcQ6PB66 1392 aaKnown RBP23.85■■□□□ 1.41
Nkx2-1-201ENSMUST00000001536 AqrQ8CFQ3 1481 aaKnown RBP23.85■■□□□ 1.41
Nkx2-1-201ENSMUST00000001536 BlmO88700 1416 aa23.84■■□□□ 1.41
Nkx2-1-201ENSMUST00000001536 Lmod2Q3UHZ5 550 aa23.83■■□□□ 1.4
Nkx2-1-201ENSMUST00000001536 Ankrd26Q811D2 1581 aa23.83■■□□□ 1.4
Nkx2-1-201ENSMUST00000001536 Eid3Q3V124 375 aa23.82■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms