RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 HJURPQ8NCD3 748 aaPredicted RBP14.84□□□□□ -0.03
UBE3A-227ENST00000638011 SCRN2Q96FV2 425 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 MECRQ9BV79 373 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 MEPEQ9NQ76 525 aaPredicted RBP14.84□□□□□ -0.03
UBE3A-227ENST00000638011 PNO1Q9NRX1 252 aaKnown RBP14.84□□□□□ -0.03
UBE3A-227ENST00000638011 XYLBO75191 536 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 LRATO95237 230 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 POMCP01189 267 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 PRKACBP22694 351 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 COQ8BQ96D53 544 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 MROH8Q9H579 483 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 KCTD5Q9NXV2 234 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 GAKO14976 1311 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 J3QR89 54 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 MT-ND2P03891 347 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 SCGB2A2Q13296 93 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 OR2T5Q6IEZ7 315 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 OR2T29Q8NH02 315 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 SLC41A3Q96GZ6 507 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 GAD1Q99259 594 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 PCDHGA8Q9Y5G5 932 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 EFCAB7A8K855 629 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 NT5C1B-RDH14C9J2C7 533 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 RPL10P27635 214 aaKnown RBP14.84□□□□□ -0.03
UBE3A-227ENST00000638011 HMGCS2P54868 508 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 GABARAPL2P60520 117 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 SCGB2B2Q4G0G5 96 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 WDR45BQ5MNZ6 344 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 CES3Q6UWW8 571 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 BORCS7Q96B45 105 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 PCDHB18PQ96TA0 734 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 CAPN15O75808 1086 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 ERCC1P07992 297 aaPredicted RBP14.84□□□□□ -0.03
UBE3A-227ENST00000638011 KIAA1614Q5VZ46 1190 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 GK5Q6ZS86 529 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 GPRC5AQ8NFJ5 357 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 COPS7AQ9UBW8 275 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 DNMT3LQ9UJW3 386 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 SPIN1Q9Y657 262 aaPredicted RBP14.84□□□□□ -0.03
UBE3A-227ENST00000638011 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
UBE3A-227ENST00000638011 MPDZO75970 2070 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 SHOXO15266 292 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 CCNFP41002 786 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 DUSP4Q13115 394 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 C9orf64Q5T6V5 341 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 MEDAGQ5VYS4 303 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 C3orf49Q96BT1 292 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 OR14A2Q96R54 314 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 HEPHQ9BQS7 1158 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 ZNF175Q9Y473 711 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 COLEC10Q9Y6Z7 277 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 PPLO60437 1756 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 A0A1W2PRQ8 180 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 PPM1AP35813 382 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 HID1Q8IV36 788 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 SPATA6LQ8N4H0 392 aa14.84□□□□□ -0.03
UBE3A-227ENST00000638011 DNASE1P24855 282 aa14.83□□□□□ -0.03
UBE3A-227ENST00000638011 TARDBPQ13148 414 aaKnown RBP eCLIP14.83□□□□□ -0.033e-7■■■■■ 32.9
UBE3A-227ENST00000638011 SP140Q13342 867 aa14.83□□□□□ -0.03
UBE3A-227ENST00000638011 SETD6Q8TBK2 473 aa14.83□□□□□ -0.03
UBE3A-227ENST00000638011 COPS5Q92905 334 aa14.83□□□□□ -0.03
UBE3A-227ENST00000638011 ORAI2Q96SN7 254 aa14.83□□□□□ -0.03
UBE3A-227ENST00000638011 MRPL45Q9BRJ2 306 aaKnown RBP14.83□□□□□ -0.03
UBE3A-227ENST00000638011 TDRD3Q9H7E2 651 aaKnown RBP14.83□□□□□ -0.03
UBE3A-227ENST00000638011 RUVBL1Q9Y265 456 aaKnown RBP14.83□□□□□ -0.03
UBE3A-227ENST00000638011 SNX10Q9Y5X0 201 aa14.83□□□□□ -0.03
UBE3A-227ENST00000638011 CACNA1DQ01668 2161 aa14.83□□□□□ -0.03
UBE3A-227ENST00000638011 LOC100509620A0A075B734 347 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 C17orf113A0A1B0GUU1 675 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 F5H0A9 414 aaPredicted RBP14.83□□□□□ -0.04
UBE3A-227ENST00000638011 LRRTM2O43300 516 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 HERV-K104P61576 105 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 C10orf62Q5T681 223 aaPredicted RBP14.83□□□□□ -0.04
UBE3A-227ENST00000638011 C3P1Q6ZMU1 363 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 GID4Q8IVV7 300 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 PIAS4Q8N2W9 510 aaPredicted RBP14.83□□□□□ -0.04
UBE3A-227ENST00000638011 MAPKAP1Q9BPZ7 522 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 MRI1Q9BV20 369 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 PIM2Q9P1W9 311 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 CLDN4O14493 209 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 ACTBP60709 375 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 ACTG1P63261 375 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 SUSD4Q5VX71 490 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 C12orf40Q86WS4 652 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 CHPT1Q8WUD6 406 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 TLCD1Q96CP7 247 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 CPXM1Q96SM3 734 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 ATP5C1P36542 298 aaKnown RBP14.83□□□□□ -0.04
UBE3A-227ENST00000638011 SMARCB1Q12824 385 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 PTP4A2Q12974 167 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 DNASE1L3Q13609 305 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 AARDQ4LEZ3 155 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 OR5T2Q8NGG2 359 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 SHKBP1Q8TBC3 707 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 SLC35C1Q96A29 364 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 CADM1Q9BY67 442 aaKnown RBP14.83□□□□□ -0.04
UBE3A-227ENST00000638011 PTTG3PQ9NZH4 202 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
UBE3A-227ENST00000638011 NELFEP18615 380 aaKnown RBP14.83□□□□□ -0.04
UBE3A-227ENST00000638011 RAB3BP20337 219 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms