RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 GTF2H3Q13889 308 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 TAF1CQ15572 869 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 PGS1Q32NB8 556 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 ATXN7L2Q5T6C5 722 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 CACHD1Q5VU97 1274 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 RNF219Q5W0B1 726 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 CADM3Q8N126 398 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 GPR63Q9BZJ6 419 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 DNMT3BQ9UBC3 853 aaKnown RBP13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 OPTCQ9UBM4 332 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 DLGAP4Q9Y2H0 992 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 PKP3Q9Y446 797 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 ORC6Q9Y5N6 252 aa13.83□□□□□ -0.2
RAPGEF3-218ENST00000548919 MTMR11A4FU01 709 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 GOLGA8CPA6NN73 597 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 MYO1GB0I1T2 1018 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 FADS2O95864 444 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 CD160O95971 181 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 KLKB1P03952 638 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 ASGR1P07306 291 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 BMP4P12644 408 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 BCKDHAP12694 445 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 PAX3P23760 479 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 PSMB9P28065 219 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 EPHA2P29317 976 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 NRIP1P48552 1158 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 CDH4P55283 916 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 ARF5P84085 180 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 TOP3AQ13472 1001 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 MAPK11Q15759 364 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 NPTX1Q15818 432 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 INAQ16352 499 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF551Q7Z340 670 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 SERPINA9Q86WD7 417 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 RORBQ92753 470 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 UBE2FQ969M7 185 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 HERC2P3Q9BVR0 1158 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 TRIT1Q9H3H1 467 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 IL17CQ9P0M4 197 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 PIKFYVEQ9Y2I7 2098 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 TRBV5-3A0A0A0MS03 114 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 A8MX80 341 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 PER2O15055 1255 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC16A6O15403 523 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 GABARAPO95166 117 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 LRATO95237 230 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC25A14O95258 325 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 ALDH2P05091 517 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 RETP07949 1114 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 IRF1P10914 325 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 CACNG1Q06432 222 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 CPSF6Q16630 551 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 CPZQ66K79 652 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZDHHC21Q8IVQ6 265 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 RPL3LQ92901 407 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 ABHD8Q96I13 439 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 PYURFQ96I23 114 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 CLPBQ9H078 707 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 SERHLQ9NQF3 203 aa13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 PNMA8BQ9ULN7 279 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 PRAMEF1O95521 474 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 RYKP34925 604 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 MASP1P48740 699 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 CLK3P49761 638 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 GZMMP51124 257 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF177Q13360 481 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 GBX1Q14549 363 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 USP39Q53GS9 565 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 DSG4Q86SJ6 1040 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 PIK3C3Q8NEB9 887 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 PDLIM5Q96HC4 596 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 TSSK3Q96PN8 268 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 FAM193BQ96PV7 902 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 HEPHQ9BQS7 1158 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 CPPED1Q9BRF8 314 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 WDR12Q9GZL7 423 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 PRDM8Q9NQV8 689 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 C1orf109Q9NX04 203 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 hCG_2039718K7EN88 272 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 MANBAO00462 879 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 CCDC159P0C7I6 412 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 TACR1P25103 407 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 CTGFP29279 349 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 DAPP51397 102 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 NEK2P51955 445 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 RPS3AP61247 264 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 C5orf22Q49AR2 442 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 MFSD4AQ8N468 514 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 WBP2Q969T9 261 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 ULK4Q96C45 1275 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 SH3GL1Q99961 368 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 FAM126AQ9BYI3 521 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 TNKS2Q9H2K2 1166 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 RASSF1Q9NS23 344 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 ATAD3AQ9NVI7 634 aa13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 FCF1Q9Y324 198 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC28A1O00337 649 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms