RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 UPF2Q9HAU5 1272 aaKnown RBP3.64□□□□□ -1.83
KNTC1-211ENST00000541427 MAP3K20Q9NYL2 800 aaKnown RBP3.64□□□□□ -1.83
KNTC1-211ENST00000541427 AMACRQ9UHK6 382 aa3.64□□□□□ -1.83
KNTC1-211ENST00000541427 COL5A2P05997 1499 aaPredicted RBP3.64□□□□□ -1.83
KNTC1-211ENST00000541427 C5P01031 1676 aa3.64□□□□□ -1.83
KNTC1-211ENST00000541427 ROBO1Q9Y6N7 1651 aa3.64□□□□□ -1.83
KNTC1-211ENST00000541427 NRAPQ86VF7 1730 aa3.64□□□□□ -1.83
KNTC1-211ENST00000541427 COL14A1Q05707 1796 aaKnown RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 DISP2A7MBM2 1401 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 NOTCH3Q9UM47 2321 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 LRRC72A6NJI9 287 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 CREG1O75629 220 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 CFC1BP0CG36 223 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 CFC1P0CG37 223 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 MSH3P20585 1137 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 CBLP22681 906 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 GLIPR1P48060 266 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 CLNS1AP54105 237 aaKnown RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 CHAF1BQ13112 559 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 CUL4AQ13619 759 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 WTAPQ15007 396 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 DUOXA1Q1HG43 343 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 SPATA1Q5VX52 437 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 INTS8Q75QN2 995 aaKnown RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 GALNT5Q7Z7M9 940 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 KBTBD6Q86V97 674 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 LINC00346Q8IVM7 164 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 KLHDC8BQ8IXV7 354 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 POC5Q8NA72 575 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 ZNF473Q8WTR7 871 aaKnown RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 FCAMRQ8WWV6 532 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 FRAT1Q92837 279 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 ZNF501Q96CX3 271 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 DENND2DQ9H6A0 471 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 PELI2Q9HAT8 420 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 APOBEC3GQ9HC16 384 aaKnown RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 SLC38A7Q9NVC3 462 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 MIOSQ9NXC5 875 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 PTRH2Q9Y3E5 179 aaKnown RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 TOGARAM1Q9Y4F4 1720 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 ASTN2O75129 1339 aaPredicted RBP3.63□□□□□ -1.83
KNTC1-211ENST00000541427 TUBGCP6Q96RT7 1819 aa3.63□□□□□ -1.83
KNTC1-211ENST00000541427 KIF26BQ2KJY2 2108 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 TNS2Q63HR2 1409 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 KCPQ6ZWJ8 1503 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 FAM72CH0Y354 149 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 H0YIN7 160 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 TO15178 435 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 ADAMDEC1O15204 470 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 ENTPD3O75355 529 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 PGM3O95394 542 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 TSHBP01222 138 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 AMBPP02760 352 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 TRIM21P19474 475 aaKnown RBP3.62□□□□□ -1.83
KNTC1-211ENST00000541427 NRIP1P48552 1158 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 THOP1P52888 689 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 SNX16P57768 344 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 SNRPEP62304 92 aaKnown RBP3.62□□□□□ -1.83
KNTC1-211ENST00000541427 EPS8Q12929 822 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 RBM39Q14498 530 aaKnown RBP3.62□□□□□ -1.83
KNTC1-211ENST00000541427 TAF7Q15545 349 aaPredicted RBP3.62□□□□□ -1.83
KNTC1-211ENST00000541427 RILPL1Q5EBL4 403 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 TECRLQ5HYJ1 363 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 FAM72AQ5TYM5 149 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 FAM72DQ6L9T8 149 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 ZNF449Q6P9G9 518 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 DENND5BQ6ZUT9 1274 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 DGLUCYQ7Z3D6 616 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 FAM72BQ86X60 149 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 CRYBG2Q8N1P7 616 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 L3MBTL4Q8NA19 623 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 ERLEC1Q96DZ1 483 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 PRMT6Q96LA8 375 aaPredicted RBP3.62□□□□□ -1.83
KNTC1-211ENST00000541427 RTN4RQ9BZR6 473 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 CHMP4BQ9H444 224 aaKnown RBP3.62□□□□□ -1.83
KNTC1-211ENST00000541427 FAM118AQ9NWS6 357 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 ARHGEF38Q9NXL2 777 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 PTTG2Q9NZH5 202 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 NPAP1Q9NZP6 1156 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 LARSQ9P2J5 1176 aaKnown RBP3.62□□□□□ -1.83
KNTC1-211ENST00000541427 ACAD8Q9UKU7 415 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 PCDHGB4Q9UN71 923 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 JRKLQ9Y4A0 524 aa3.62□□□□□ -1.83
KNTC1-211ENST00000541427 NWD2Q9ULI1 1742 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 PRSS51A0A1B0GVH4 220 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 PMS2P5A8MQ11 134 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 AHCYL1O43865 530 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 GPR137BO60478 399 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 TSPAN9O75954 239 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 PRSS1P07477 247 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 ACP2P11117 423 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 CKMT2P17540 419 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 ACTN2P35609 894 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 CDKN1AP38936 164 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 NR2C2P49116 596 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 PNRC1Q12796 327 aaPredicted RBP3.61□□□□□ -1.83
KNTC1-211ENST00000541427 MFAP5Q13361 173 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 MELKQ14680 651 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 PCLAFQ15004 111 aa3.61□□□□□ -1.83
KNTC1-211ENST00000541427 KRT71Q3SY84 523 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms