RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CCDC168Q8NDH2 2452 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 NBEAL1Q6ZS30 2694 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 IGKV6D-21A0A0A0MT36 114 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CCDC194A0A1B0GVG4 234 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 LNP1A1A4G5 178 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 ARHGEF37A1IGU5 675 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 TMEM189-UBE2V1I3L0A0 370 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CDX4O14627 284 aaPredicted RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 ZNF197O14709 1029 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CHADO15335 359 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 MAGEB2O15479 319 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 YKT6O15498 198 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 N4BP1O75113 896 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 ATP2C2O75185 946 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 GJB3O75712 270 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 NDUFB4O95168 129 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 FGF19O95750 216 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 KRT18P05783 430 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 URODP06132 367 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 DCNP07585 359 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 TFPIP10646 304 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 TOP1P11387 765 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 PSMC3P17980 439 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 RXRAP19793 462 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 AGAP20933 346 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 ALDH4A1P30038 563 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 DCTP40126 519 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 EIF2S3P41091 472 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 SEC61BP60468 96 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 LMO4P61968 165 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 TIMM10P62072 90 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 GNB1P62873 340 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 TFCP2Q12800 502 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 G3BP1Q13283 466 aaKnown RBP eCLIP1.6□□□□□ -2.15
CD44-212ENST00000524922 BAATQ14032 418 aaPredicted RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 WTAPQ15007 396 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 HSDL1Q3SXM5 330 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 USH1GQ495M9 461 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 MMEL1Q495T6 779 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 ASPRV1Q53RT3 343 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 KCNT1Q5JUK3 1230 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 MARCH8Q5T0T0 291 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 SLC9C2Q5TAH2 1124 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 ARHGAP11AQ6P4F7 1023 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CTR9Q6PD62 1173 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 IL27RAQ6UWB1 636 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 LCTLQ6UWM7 567 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CHD1LQ86WJ1 897 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 LSMEM2Q8N112 164 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 GHDCQ8N2G8 530 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CPXM2Q8N436 756 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 SEPT1Q8WYJ6 367 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 RFFLQ8WZ73 363 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 NXPE2Q96DL1 559 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 MED8Q96G25 268 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CNOT6LQ96LI5 555 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 CASD1Q96PB1 797 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 APOL6Q9BWW8 343 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 NT5C3AQ9H0P0 336 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 GLT8D2Q9H1C3 349 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 CHODLQ9H9P2 273 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 C17orf75Q9HAS0 396 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 MMP25Q9NPA2 562 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 PIH1D3Q9NQM4 214 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 PXMP2Q9NR77 195 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 RASSF1Q9NS23 344 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 ABCF3Q9NUQ8 709 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 TAAR2Q9P1P5 351 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 IFT80Q9P2H3 777 aaPredicted RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 DBNLQ9UJU6 430 aaKnown RBP1.6□□□□□ -2.15
CD44-212ENST00000524922 FBXW11Q9UKB1 542 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 PADI3Q9ULW8 664 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 LRCH1Q9Y2L9 728 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.6□□□□□ -2.15
CD44-212ENST00000524922 STON1Q9Y6Q2 735 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 DOPEY2Q9Y3R5 2298 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 MYH1P12882 1939 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 PDZD2O15018 2839 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 TSC2P49815 1807 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 MYO10Q9HD67 2058 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 HIVEP1P15822 2718 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 A0A087X002 238 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 PMS2P5A8MQ11 134 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 TRDMT1O14717 391 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 PER2O15055 1255 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 IPO8O15397 1037 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 FLRT2O43155 660 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 RRP8O43159 456 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 PRC1O43663 620 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 DFNA5O60443 496 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 CRLF1O75462 422 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 RPS6KA5O75582 802 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 TIPRLO75663 272 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 IDH1O75874 414 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 GGPS1O95749 300 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 ATP1A1P05023 1023 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 TUBBP07437 444 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 GALTP07902 379 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 CYC1P08574 325 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 SERPINF2P08697 491 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms