RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 POLG2Q9UHN1 485 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 FBXO5Q9UKT4 447 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 TDRKHQ9Y2W6 561 aaKnown RBP13.2□□□□□ -0.3
PDCD11-206ENST00000493610 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
PDCD11-206ENST00000493610 ATRXP46100 2492 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 PCSK5Q92824 1860 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 A0A1W2PPV9 198 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 PIPSLA2A3N6 862 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 E7ESA3 106 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 MATN2O00339 956 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 PRB1P04280 392 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 PAMP19021 973 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 CDH3P22223 829 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 ATP5DP30049 168 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 ELK3P41970 407 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 YBX1P67809 324 aaKnown RBP13.19□□□□□ -0.3
PDCD11-206ENST00000493610 TUBB4BP68371 445 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 ABHD18Q0P651 414 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
PDCD11-206ENST00000493610 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-206ENST00000493610 STEAP4Q687X5 459 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-206ENST00000493610 PPP1R3BQ86XI6 285 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 DCUN1D3Q8IWE4 304 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 CNTN4Q8IWV2 1026 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 OTUD6BQ8N6M0 293 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 EXD3Q8N9H8 876 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDCD11-206ENST00000493610 C2CD4AQ8NCU7 369 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-206ENST00000493610 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 CFAP61Q8NHU2 1237 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 SLC45A3Q96JT2 553 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 FCRL4Q96PJ5 515 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 OR6C2Q9NZP2 312 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 RARRES3Q9UL19 164 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 PCDHB11Q9Y5F2 797 aa13.19□□□□□ -0.3
PDCD11-206ENST00000493610 MRPS18BQ9Y676 258 aaKnown RBP13.19□□□□□ -0.3
PDCD11-206ENST00000493610 ARHGEF33A8MVX0 844 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 RASGRF2O14827 1237 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 NKX2-8O15522 239 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 RAD51CO43502 376 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 NTRK1P04629 796 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 ERGP11308 486 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 CD9P21926 228 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 GCGRP47871 477 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 ATP1A2P50993 1020 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 RAB28P51157 221 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 PGGT1BP53609 377 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 RHDQ02161 417 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 ACY1Q03154 408 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 C2orf54Q08AI8 447 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 PRKAA1Q13131 559 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 GPS2Q13227 327 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 BBS9Q3SYG4 887 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 RBM20Q5T481 1227 aaKnown RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 ZNF385CQ66K41 422 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 ARMC6Q6NXE6 501 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 C6orf15Q6UXA7 325 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 OTOAQ7RTW8 1153 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 ZNF572Q7Z3I7 529 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 PCGF5Q86SE9 256 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 KCNMB4Q86W47 210 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 C2orf73Q8N5S3 287 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 ZBTB2Q8N680 514 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 IL22RA1Q8N6P7 574 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 OR2L8Q8NGY9 312 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 CD200R1Q8TD46 325 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 AARSD1Q9BTE6 412 aaKnown RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 TSSK1BQ9BXA7 367 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 TRIM31Q9BZY9 425 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 IARS2Q9NSE4 1012 aaKnown RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 GRHL1Q9NZI5 618 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 TSR3Q9UJK0 312 aaKnown RBP13.18□□□□□ -0.3
PDCD11-206ENST00000493610 KLHL20Q9Y2M5 609 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 SNX24Q9Y343 169 aa13.18□□□□□ -0.3
PDCD11-206ENST00000493610 F8W8V4 182 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 H3BMM5 538 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 KPNA5O15131 536 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 NRP2O60462 931 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
PDCD11-206ENST00000493610 AHSGP02765 367 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 CAPN1P07384 714 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 FURINP09958 794 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 RORAP35398 523 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 THOC5Q13769 683 aaKnown RBP13.17□□□□□ -0.3
PDCD11-206ENST00000493610 COL9A2Q14055 689 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-206ENST00000493610 FASTKQ14296 549 aaKnown RBP13.17□□□□□ -0.3
PDCD11-206ENST00000493610 TMED2Q15363 201 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 TRADDQ15628 312 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 TBR1Q16650 682 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 SLC5A12Q1EHB4 618 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 KLHL38Q2WGJ6 581 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 SPANXN3Q5MJ09 141 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
PDCD11-206ENST00000493610 ATP1A1-AS1Q5TC04 95 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms