RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 PVRP15151 417 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 CYP2A7P20853 494 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 MGAT1P26572 445 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 NMBRP28336 390 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 GABRA4P48169 554 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 RAB28P51157 221 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 PMS2P54278 862 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 ADARP55265 1226 aaKnown RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 ITGA1P56199 1179 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 SARNPP82979 210 aaKnown RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 ERV3-1Q14264 604 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 CYP1B1Q16678 543 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 KYNUQ16719 465 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 UGT8Q16880 541 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 TYSND1Q2T9J0 566 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 PLEKHS1Q5SXH7 462 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 RNF187Q5TA31 235 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 KIAA0930Q6ICG6 404 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 FAM199XQ6PEV8 388 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 VRK3Q8IV63 474 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 DCUN1D3Q8IWE4 304 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 LKAAEAR1Q8TD35 194 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 THAP4Q8WY91 577 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 MR1Q95460 341 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 TCF12Q99081 682 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 NAP1L3Q99457 506 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 DPH2Q9BQC3 489 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 MENTQ9BUN1 341 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 CHST8Q9H2A9 424 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 ACTR5Q9H9F9 607 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 PCMTD2Q9NV79 361 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 SYBUQ9NX95 663 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 SPHK1Q9NYA1 384 aa13.92□□□□□ -0.18
CLDN11-207ENST00000486975 FARSAQ9Y285 508 aaKnown RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 TDRKHQ9Y2W6 561 aaKnown RBP13.92□□□□□ -0.18
CLDN11-207ENST00000486975 TCRBV7S3A2A0A539 114 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 CDC14CA4D256 554 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 IQCF5A8MTL0 148 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 E7EQ34 232 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 H3BMH7 237 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 NDUFS3O75489 264 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 MLNP12872 115 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 GPS1Q13098 491 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 GRB7Q14451 532 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 PTRHD1Q6GMV3 140 aaKnown RBP13.91□□□□□ -0.18
CLDN11-207ENST00000486975 MRNIPQ6NTE8 343 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 TTC27Q6P3X3 843 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 LPGAT1Q92604 370 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 SLC22A18Q96BI1 424 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 MFSD3Q96ES6 412 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 ABHD17AQ96GS6 310 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 RUFY1Q96T51 708 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 NLNQ9BYT8 704 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 FAM60AQ9NP50 221 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 ANAPC2Q9UJX6 822 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 MAN2B2Q9Y2E5 1009 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 AP1M2Q9Y6Q5 423 aa13.91□□□□□ -0.18
CLDN11-207ENST00000486975 H3BMM5 538 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 MKRN2OSH3BPM6 223 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 PFDN6O15212 129 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 RFPL1O75677 317 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 VAPBO95292 243 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 FKBP9O95302 570 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 WISP1O95388 367 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 KRT14P02533 472 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 CAPN1P07384 714 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 PAMP19021 973 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 OGNP20774 298 aaKnown RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 CD9P21926 228 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 ATP5DP30049 168 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 PEBP1P30086 187 aaKnown RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 CSE1LP55060 971 aaKnown RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 NFKB2Q00653 900 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 TRIP13Q15645 432 aaPredicted RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 ZIC1Q15915 447 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 LACTB2Q53H82 288 aaPredicted RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 PRAMEF17Q5VTA0 474 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 ZNF385CQ66K41 422 aaPredicted RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 TCTN3Q6NUS6 607 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 FAM198BQ6UWH4 519 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 SDCCAG8Q86SQ7 713 aaPredicted RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 TRIM73Q86UV7 250 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 SYTL1Q8IYJ3 562 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 GPR135Q8IZ08 494 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 KRT222Q8N1A0 295 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 LINC01555Q8NAE3 123 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 MCUQ8NE86 351 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 MAGOHBQ96A72 148 aaKnown RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 BIRC8Q96P09 236 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 RAB11FIP5Q9BXF6 653 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 KLHL25Q9H0H3 589 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 XAB2Q9HCS7 855 aaKnown RBP13.9□□□□□ -0.18
CLDN11-207ENST00000486975 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 BOD1L1Q8NFC6 3051 aa13.9□□□□□ -0.18
CLDN11-207ENST00000486975 MAGEB16A2A368 324 aa13.89□□□□□ -0.19
CLDN11-207ENST00000486975 RASGRF2O14827 1237 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms