RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MRPS18BQ9Y676 258 aaKnown RBP9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC30A1Q9Y6M5 507 aa9.19□□□□□ -0.94
TMEM39A-208ENST00000486159 HMX2A2RU54 273 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 FOXO6A8MYZ6 492 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 STMND1H3BQB6 276 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 GPR39O43194 453 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 GRID2O43424 1007 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 SUV39H1O43463 412 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 NUAK1O60285 661 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 TGDSO95455 350 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 NDST3O95803 873 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 APOA4P06727 396 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ERVK-10P10266 1014 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 PRKAR1AP10644 381 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 COL6A2P12110 1019 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF28P17035 718 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 TYRP1P17643 537 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 F8A1P23610 371 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 CSTF2P33240 577 aaKnown RBP eCLIP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 SH3BP2P78314 561 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 KCNC4Q03721 635 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 CDK18Q07002 472 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 SRSF1Q07955 248 aaKnown RBP eCLIP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 THOC5Q13769 683 aaKnown RBP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 CCDC153Q494R4 210 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 TSTD2Q5T7W7 516 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 MROH9Q5TGP6 573 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 TMEM164Q5U3C3 297 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ATG16L1Q676U5 607 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 SPATA21Q7Z572 469 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ARHGAP22Q7Z5H3 698 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 STRA8Q7Z7C7 330 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ADGRG6Q86SQ4 1221 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 NDUFAF2Q8N183 169 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 IL22RA1Q8N6P7 574 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 AHCTF1Q8WYP5 2266 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF75CPQ92670 426 aaPredicted RBP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 MFSD3Q96ES6 412 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 PLEKHG4BQ96PX9 1271 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 LYSMD1Q96S90 227 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ELAC2Q9BQ52 826 aaKnown RBP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 C19orf43Q9BQ61 176 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 APOL2Q9BQE5 337 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 MCMBPQ9BTE3 642 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 FAM117AQ9C073 453 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ZMYND15Q9H091 742 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 RHOJQ9H4E5 214 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 CLMPQ9H6B4 373 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 MANSC1Q9H8J5 431 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 CHRAC1Q9NRG0 131 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 KLC4Q9NSK0 619 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF624Q9P2J8 865 aaPredicted RBP9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 PILRAQ9UKJ1 303 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 DNAJC16Q9Y2G8 782 aa9.18□□□□□ -0.94
TMEM39A-208ENST00000486159 C2CD3Q4AC94 2353 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 MROH6A6NGR9 719 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 GOLGA8RI6L899 631 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 K7EM74 188 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 KIF1CO43896 1103 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 UGT1A9O60656 530 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 EDF1O60869 148 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ITGB2P05107 769 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 FURINP09958 794 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 TROVE2P10155 538 aaKnown RBP eCLIP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 BPIP17213 487 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 TPH1P17752 444 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 PSMA3P25788 255 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 NFKBIAP25963 317 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 NMBRP28336 390 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 TYK2P29597 1187 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ALDH3A1P30838 453 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 FOXN2P32314 431 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC19A1P41440 591 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 LEPRP48357 1165 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ARCN1P48444 511 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 SERPINB4P48594 390 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 SEPHS1P49903 392 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 PRKAA2P54646 552 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 PPP1CAP62136 330 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 MC2RQ01718 297 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 TRA2AQ13595 282 aaKnown RBP eCLIP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 PTPRCAPQ14761 206 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 POU6F1Q14863 301 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 HSP90AA5PQ58FG0 334 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 DCAF12Q5T6F0 453 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 CCDC121Q6ZUS5 278 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF547Q8IVP9 402 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 OTUD6BQ8N6M0 293 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 OR10G6Q8NH81 332 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 BRSK1Q8TDC3 778 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 SREK1Q8WXA9 508 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ELMO2Q96JJ3 720 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 FAM111AQ96PZ2 611 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 GPR22Q99680 433 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 DDA1Q9BW61 102 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 SPATA16Q9BXB7 569 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ADGRE3Q9BY15 652 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms