RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 MRM3Q9HC36 420 aaKnown RBP15.71■□□□□ 0.11
SNRPD3-204ENST00000439775 HOMER3Q9NSC5 361 aa15.71■□□□□ 0.11
SNRPD3-204ENST00000439775 BFARQ9NZS9 450 aa15.71■□□□□ 0.11
SNRPD3-204ENST00000439775 PLAGL1Q9UM63 463 aa15.71■□□□□ 0.11
SNRPD3-204ENST00000439775 PCDHGA9Q9Y5G4 932 aaKnown RBP15.71■□□□□ 0.11
SNRPD3-204ENST00000439775 AP1M2Q9Y6Q5 423 aa15.71■□□□□ 0.11
SNRPD3-204ENST00000439775 IQCF5A8MTL0 148 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 C9J4A7 227 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 OR2B3O76000 313 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 TPSB2P20231 275 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 PEBP1P30086 187 aaKnown RBP15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 NPY2RP49146 381 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 CSE1LP55060 971 aaKnown RBP15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 CRADDP78560 199 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 TPSAB1Q15661 275 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 KYNUQ16719 465 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 PTCHD3Q3KNS1 767 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 CPZQ66K79 652 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 RHBDD2Q6NTF9 364 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 LRRC6Q86X45 466 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 PROKR1Q8TCW9 393 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 PANX3Q96QZ0 392 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 KIFC1Q9BW19 673 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 ING2Q9H160 280 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 MLXIPLQ9NP71 852 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 GNPTGQ9UJJ9 305 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 SRPK3Q9UPE1 567 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 PADI2Q9Y2J8 665 aa15.7■□□□□ 0.1
SNRPD3-204ENST00000439775 ISM1B1AKI9 464 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 ZSCAN9O15535 394 aaPredicted RBP15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 PDGFAP04085 211 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 AGXTP21549 392 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 RPS3P23396 243 aaKnown RBP eCLIP15.69■□□□□ 0.17e-7■■■■□ 20.3
SNRPD3-204ENST00000439775 PTGIRP43119 386 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 CCZ1BP86790 482 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 CCZ1P86791 482 aaPredicted RBP15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 DEFB110Q30KQ9 67 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 ARMC3Q5W041 872 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 PAPD7Q5XG87 772 aaKnown RBP15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 PTRHD1Q6GMV3 140 aaKnown RBP15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 LRRC8BQ6P9F7 803 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 LDB1Q86U70 411 aaPredicted RBP15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 TEX19Q8NA77 164 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 LINC01555Q8NAE3 123 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 SLC22A18Q96BI1 424 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 RAB11FIP5Q9BXF6 653 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 ACSS2Q9NR19 701 aa15.69■□□□□ 0.1
SNRPD3-204ENST00000439775 RELNP78509 3460 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 ARGFXA6NJG6 315 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 KPNA5O15131 536 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 HCRTR1O43613 425 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 CEP104O60308 925 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 TMEM63AO94886 807 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 S1PR4O95977 384 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 CD9P21926 228 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 ARNTP27540 789 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 NMBRP28336 390 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 MAGEA6P43360 314 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 KCNJ1P48048 391 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 PGDP52209 483 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 GRB7Q14451 532 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 TLDC1Q6P9B6 456 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 KRT222Q8N1A0 295 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 DNAJC22Q8N4W6 341 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 PRELID2Q8N945 189 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 OR2L8Q8NGY9 312 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 GBP5Q96PP8 586 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 SLC25A23Q9BV35 468 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 SYBUQ9NX95 663 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 MRFAP1Q9Y605 127 aa15.68■□□□□ 0.1
SNRPD3-204ENST00000439775 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 RASGRF2O14827 1237 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 NRDCO43847 1150 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 NDUFS3O75489 264 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 KLF7O75840 302 aaPredicted RBP15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 CEACAM4O75871 244 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 FKBP9O95302 570 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 CD63P08962 238 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 MAGP20916 626 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 MGAT1P26572 445 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 CXCR5P32302 372 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 CHAF1BQ13112 559 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 KCNJ11Q14654 390 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 FAM69BQ5VUD6 431 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 MRNIPQ6NTE8 343 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 MED25Q71SY5 747 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 OTOAQ7RTW8 1153 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 RAB43Q86YS6 212 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 TMEM102Q8N9M5 508 aaPredicted RBP15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 CFAP61Q8NHU2 1237 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 GSDMBQ8TAX9 411 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 MFSD3Q96ES6 412 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 SPRTNQ9H040 489 aaPredicted RBP15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 SOX13Q9UN79 622 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 PLCL2Q9UPR0 1127 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 PPP2R2CQ9Y2T4 447 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 PCDHGB7Q9Y5F8 929 aa15.67■□□□□ 0.1
SNRPD3-204ENST00000439775 TCRBV7S3A2A0A539 114 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms