RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PPP1R16BQ96T49 567 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 SLC9A7Q96T83 725 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 NPAS1Q99742 590 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 RBM4BQ9BQ04 359 aaKnown RBP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 RBM4Q9BWF3 364 aaKnown RBP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 SHARPINQ9H0F6 387 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 CDCP1Q9H5V8 836 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 TRIM45Q9H8W5 580 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 IL1RAPQ9NPH3 570 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 C3orf18Q9UK00 162 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 TRAPPC4Q9Y296 219 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 CLCA3PQ9Y6N3 262 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 BBIP1A8MTZ0 92 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 GREM1O60565 184 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 RFPL3O75679 317 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 SLC35E2BP0CK96 405 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 JUNDP17535 347 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 CHMP24386 653 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 SDC4P31431 198 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 RAB25P57735 213 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 RPA4Q13156 261 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 EXOSC2Q13868 293 aaKnown RBP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 GRIK4Q16099 956 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 ZC3H12BQ5HYM0 836 aaKnown RBP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 PAGE3Q5JUK9 113 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 HEATR6Q6AI08 1181 aaKnown RBP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 TFAP2EQ6VUC0 442 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 LARP4Q71RC2 724 aaKnown RBP eCLIP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 CHMP1BQ7LBR1 199 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 SNX20Q7Z614 316 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 SLC41A1Q8IVJ1 513 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 LAX1Q8IWV1 398 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 LPPQ93052 612 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 C19orf60Q96EN9 201 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 GPR137Q96N19 417 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 MYOCQ99972 504 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 SLC6A15Q9H2J7 730 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 AKTIPQ9H8T0 292 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 GALNT9Q9HCQ5 603 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 AMBNQ9NP70 447 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 TLR6Q9Y2C9 796 aa10.44□□□□□ -0.74
CAPN3-203ENST00000349748 TNPO3Q9Y5L0 923 aaKnown RBP10.44□□□□□ -0.74
CAPN3-203ENST00000349748 FABP7O15540 132 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 DFNA5O60443 496 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GRAP2O75791 330 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 C4BPAP04003 597 aaKnown RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 RPLP0P05388 317 aaKnown RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 CDK1P06493 297 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 SLC10A3P09131 477 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 RAP2AP10114 183 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 SRCP12931 536 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 TGM4P49221 684 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 HOXA1P49639 335 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 RGS7P49802 495 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GDI2P50395 445 aaKnown RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 CYP4F2P78329 520 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 CHRNB3Q05901 458 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 CYP4F3Q08477 520 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GRB7Q14451 532 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 ZNF169Q14929 603 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 SGCAQ16586 387 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 MTERF2Q49AM1 385 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 PDSS1Q5T2R2 415 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GPR139Q6DWJ6 353 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 ALG1LQ6GMV1 187 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 DTWD1Q8N5C7 304 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 CEP76Q8TAP6 659 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 ENKURQ8TC29 256 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 BLOC1S5Q8TDH9 187 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 MAGEB5Q9BZ81 275 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 ESRP2Q9H6T0 727 aaKnown RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 HEXA-AS1Q9H8Q6 139 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 PTPRHQ9HD43 1115 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 KLF15Q9UIH9 416 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 TMEFF2Q9UIK5 374 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 RAB23Q9ULC3 237 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 CSNK1G3Q9Y6M4 447 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 TP53BP1Q12888 1972 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 HNRNPDLO14979 420 aaKnown RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 MAFO75444 373 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 ENDOD1O94919 500 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 TNNC2P02585 160 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 SERPINF2P08697 491 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 ACSM4P0C7M7 580 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 EPHA2P29317 976 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 SSTR2P30874 369 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 SSTR4P31391 388 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 TIE1P35590 1138 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 NUP62P37198 522 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 PPP3CCP48454 512 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 SCN1BQ07699 218 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 MRPL28Q13084 256 aaKnown RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 MAB21L1Q13394 359 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 FAM83EQ2M2I3 478 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 FAM98BQ52LJ0 330 aaKnown RBP10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GPR158Q5T848 1215 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GPD1LQ8N335 351 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 GDPD1Q8N9F7 314 aa10.43□□□□□ -0.74
CAPN3-203ENST00000349748 TMEM161BQ8NDZ6 487 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms